diff --git a/README.md b/README.md index 4dfb24020c492f73de4589849ad58e09c4e53df9..564124a54b3f6209961e909f8b84b2a1d48a45f0 100644 --- a/README.md +++ b/README.md @@ -16,11 +16,11 @@ _DLL files & pyopenvdb_. You must manually copy all files from the folder _bclar _Addon Preferences_. To comminucate with the server, you need to set a username and password, private key and project (provided by IT4I infrastracture), and install dependencies. - + If the installation is succesfful, you will see the tab called BClara with the following user interface. - + #### Installation of Clara to the cluster If you want to use the BClara backend and inference on the cluster, you need an access to the IT4I infrastracture. You have an option to get a computing time, for example, by using Open Access Competition. For more information: https://www.it4i.cz/en/for-users/computing-resources-allocation Then we will help you with the deployment of Clara on the cluster. Please contact me at petra.svobodova@vsb.cz @@ -28,11 +28,11 @@ If you want to use the BClara backend and inference on the cluster, you need an ### How to use BClara In the _first tutorial_, you can learn **how to use BClara pipeline** to load data (in DICOM or NIfTI format), connect to the cluster (need your login credentials), choose the segmentation model, segment particular tissues (automatically visualize the result), create and load volume models and customize them. - + In the _second tutorial_, you will see **how to create and visualize volume objects** in the scene if you have already obtained patient data and mask (both in NIfTI format). The connection to the HPC cluster is not required. - + ## Acknowledgement This work was supported by the Doctoral grant competition VSB - Technical University of Ostrava, reg. no. CZ.02.2.69/0.0/0.0/19_073/0016945 within the Operational Programme Research, Development and Education, under project DGS/TEAM/2020-008 "Development of a tool for scientific data processing and visualization in VR with multi-user support". \ No newline at end of file