diff --git a/skripts/modules.md b/skripts/modules.md index 3940e15db47f80744f5460735f1405e620c1e2d1..641ce3dc4050490fbeb1266d2f1a55c50b87abac 100644 --- a/skripts/modules.md +++ b/skripts/modules.md @@ -1,12 +1,13 @@ +#Modules -#Base +###Base |Module|Description|Available versions| |--|--|--| |**[EasyBuild](http://hpcugent.github.com/easybuild/)**|EasyBuild is a software build and installation framework written in Python that allows you to install software in a structured, repeatable and robust way.|<nobr>2.1.1</br>2.2.0</br>2.3.0</nobr>| |**[Python](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>3.4.3-intel-2015b</nobr>| -#Bio +###Bio |Module|Description|Available versions| |--|--|--| @@ -25,7 +26,7 @@ |**[SnpEff](http://snpeff.sourceforge.net/)**|Genetic variant annotation and effect prediction toolbox.|<nobr>4.1_G</nobr>| |**[Trimmomatic](http://www.usadellab.org/cms/?page=trimmomatic)**|Trimmomatic performs a variety of useful trimming tasks for illumina paired-end and single ended data.The selection of trimming steps and their associated parameters are supplied on the command line.|<nobr>0.35-Java-1.7.0_79</nobr>| -#Cae +###Cae |Module|Description|Available versions| |--|--|--| @@ -38,7 +39,7 @@ |**Marc**| |<nobr>2013.1.0</nobr>| |**[OpenFOAM](http://www.openfoam.com/)**|OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics.|<nobr>2.3.0-intel-2015b</br>2.2.2-intel-2015b</br>3.0.0-intel-2016.01</nobr>| -#Chem +###Chem |Module|Description|Available versions| |--|--|--| @@ -53,7 +54,7 @@ |**[NWChem](http://www.nwchem-sw.org)**|NWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters. NWChem software can handle: biomolecules, nanostructures, and solid-state; from quantum to classical, and all combinations; Gaussian basis functions or plane-waves; scaling from one to thousands of processors; properties and relativity.|<nobr>6.3.revision2-2013-10-17-Python-2.7.8</br>6.5.revision26243-intel-2015b-2014-09-10-Python-2.7.8</nobr>| |**[S4MPLE](http://infochim.u-strasbg.fr/spip.php?rubrique152)**|S4MPLE (Sampler For Multiple Protein-Ligand Entities) is a flexible molecular modeling tool, supporting empirical force field-driven conformational sampling and geometry optimization heuristics using a hybrid genetic algorithm (GA).|<nobr>1.0.0</nobr>| -#Compiler +###Compiler |Module|Description|Available versions| |--|--|--| @@ -67,7 +68,7 @@ |**[OpenCoarrays](http://www.opencoarrays.org/)**|A transport layer for coarray Fortran compilers.|<nobr>1.4.0-GCC-5.3.0-2.25</br>1.4.0-GCC-5.3.1-snapshot-20160419-2.25</nobr>| |**PGI**| |<nobr>15.7</nobr>| -#Data +###Data |Module|Description|Available versions| |--|--|--| @@ -77,7 +78,7 @@ |**[netCDF](http://www.unidata.ucar.edu/software/netcdf/)**|NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.|<nobr>4.3.2-intel-2015b</br>4.3.2-intel-2016.01</br>4.3.2-foss-2015g</br>4.3.3.1-foss-2015b</nobr>| |**[netCDF-Fortran](http://www.unidata.ucar.edu/software/netcdf/)**|NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.|<nobr>4.4.0-intel-2016.01</nobr>| -#Debugger +###Debugger |Module|Description|Available versions| |--|--|--| @@ -88,7 +89,7 @@ |**TotalView**| |<nobr>8.15.4-6-linux-x86-64</nobr>| |**[Valgrind](http://valgrind.org/downloads/)**|Valgrind: Debugging and profiling tools|<nobr>3.11.0-foss-2015b</br>3.11.0-intel-2015b</nobr>| -#Devel +###Devel |Module|Description|Available versions| |--|--|--| @@ -127,7 +128,7 @@ |**[xproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X protocol and ancillary headers|<nobr>7.0.26-foss-2015g</br>7.0.26-intel-2015b</br>7.0.26</br>7.0.28</nobr>| |**[xtrans](http://www.freedesktop.org/wiki/Software/xlibs)**|xtrans includes a number of routines to make X implementations transport-independent; at time of writing, it includes support for UNIX sockets, IPv4, IPv6, and DECnet.|<nobr>1.3.4-intel-2015b</br>1.3.5-intel-2015b</br>1.3.5-foss-2015g</br>1.3.5</nobr>| -#Geo +###Geo |Module|Description|Available versions| |--|--|--| @@ -135,7 +136,7 @@ |**[GMT](http://gmt.soest.hawaii.edu/)**|GMT is an open source collection of about 80 command-line tools for manipulating geographic and Cartesian data sets (including filtering, trend fitting, gridding, projecting, etc.) and producing PostScript illustrations ranging from simple x-y plots via contour maps to artificially illuminated surfaces and 3D perspective views; the GMT supplements add another 40 more specialized and discipline-specific tools.|<nobr>5.2.1-foss-2015g</nobr>| |**[PROJ_4](http://proj.osgeo.org)**|PROJ.4 - Cartographic Projections Library originally written by Gerald Evenden then of the USGS.|<nobr>4.9.2-foss-2015g</nobr>| -#Lang +###Lang |Module|Description|Available versions| |--|--|--| @@ -149,7 +150,7 @@ |**[OpenCL-builder](https://software.intel.com/en-us/intel-opencl)**|OpenCL™ is the first open, royalty-free standard for cross-platform, parallel programming of modern processors found in personal computers, servers and handheld/embedded devices. OpenCL (Open Computing Language) greatly improves speed and responsiveness for a wide spectrum of applications in numerous market categories from gaming and entertainment to scientific and medical software. This is builder (formerly runtime) package.|<nobr>2015</nobr>| |**[OpenCL-runtime](https://software.intel.com/en-us/intel-opencl)**|OpenCL™ is the first open, royalty-free standard for cross-platform, parallel programming of modern processors found in personal computers, servers and handheld/embedded devices. OpenCL (Open Computing Language) greatly improves speed and responsiveness for a wide spectrum of applications in numerous market categories from gaming and entertainment to scientific and medical software.|<nobr>15.1</nobr>| |**[Perl](http://www.perl.org/)**|Larry Wall's Practical Extraction and Report Language|<nobr>5.16.3-intel-2015b</br>5.20.2-bare</br>5.20.2-GNU-4.9.3-2.25-bare</nobr>| -|**[Python](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>2.7.8-intel-2015b</br>2.7.9-intel-2015b</br>2.7.9-ictce-7.3.5</br>2.7.9-foss-2015b</br>2.7.9-GNU-5.1.0-2.25</br>2.7.9-gompi-2015e</br>2.7.9-foss-2015g</br>2.7.9-intel-2016.01</br>2.7.8-intel-2016.01</br>2.7.11-intel-2015b</br>2.7.10-GNU-4.9.3-2.25-bare</br>2.7.10-GCC-4.9.3-2.25-bare</br>3.5.1-intel-2016.01</br>2.7.9</nobr>| +|**[Python](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>2.7.8-intel-2015b</br>2.7.9-intel-2015b</br>2.7.9-ictce-7.3.5</br>2.7.9-foss-2015b</br>2.7.9-GNU-5.1.0-2.25</br>2.7.9-gompi-2015e</br>2.7.9-foss-2015g</br>2.7.9-intel-2016.01</br>2.7.8-intel-2016.01</br>2.7.11-intel-2015b</br>2.7.10-GNU-4.9.3-2.25-bare</br>2.7.10-GCC-4.9.3-2.25-bare</br>3.5.1-intel-2016.01</br>2.7.9</br>3.5.1</nobr>| |**[R](http://www.r-project.org/)**|R is a free software environment for statistical computing and graphics.|<nobr>3.1.1-intel-2015b</br>3.2.3-intel-2016.01</br>3.2.3-foss-2015b</nobr>| |**[Racket](http://racket-lang.org)**|Racket is a full-spectrum programming language. It goes beyond Lisp and Scheme with dialects that support objects, types, laziness, and more.|<nobr>6.1.1-GNU-5.1.0-2.25</nobr>| |**[Ruby](https://www.ruby-lang.org)**|Ruby is a dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write.|<nobr>2.1.5-intel-2015b</br>2.3.1</nobr>| @@ -157,7 +158,7 @@ |**[SnuCL](http://snucl.snu.ac.kr)**|An OpenCL Framework for Heterogeneous Clusters|<nobr>1.3.3-gompi-2015e</nobr>| |**[Tcl](http://www.tcl.tk/)**|Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more.|<nobr>8.6.3-intel-2015b</br>8.5.12-intel-2015b</br>8.6.3-ictce-7.3.5</br>8.6.3-foss-2015b</br>8.6.3-GNU-5.1.0-2.25</br>8.6.3-gompi-2015e</br>8.6.3-foss-2015g</br>8.6.3-intel-2016.01</br>8.6.4-intel-2015b</br>8.6.4-GNU-4.9.3-2.25</br>8.6.4-GCC-4.9.3-2.25</br>8.6.4-foss-2015b</br>8.6.4-foss-2015g</br>8.6.4-intel-2016.01</br>8.6.4</br>8.6.3</br>8.5.12</nobr>| -#Lib +###Lib |Module|Description|Available versions| |--|--|--| @@ -187,7 +188,7 @@ |**[tbb](http://software.intel.com/en-us/articles/intel-tbb/)**|Intel Threading Building Blocks 4.0 (Intel TBB) is a widely used, award-winning C++ template library for creating reliable, portable, and scalable parallel applications. Use Intel TBB for a simple and rapid way of developing robust task-based parallel applications that scale to available processor cores, are compatible with multiple environments, and are easier to maintain. Intel TBB is the most proficient way to implement future-proof parallel applications that tap into the power and performance of multicore and manycore hardware platforms.|<nobr>4.3.5.187</br>4.4.2.152</nobr>| |**[zlib](http://www.zlib.net/)**|zlib is designed to be a free, general-purpose, legally unencumbered -- that is, not covered by any patents -- lossless data-compression library for use on virtually any computer hardware and operating system.|<nobr>1.2.8-GCC-5.1.0-binutils-2.25</br>1.2.7-foss-2015b</br>1.2.8-foss-2015b</br>1.2.7-intel-2015b</br>1.2.7-ictce-5.5.0</br>1.2.8-intel-2015b</br>1.2.8-GNU-5.1.0-2.25</br>1.2.8-ictce-7.3.5</br>1.2.8-gompi-2015e</br>1.2.8-GCC-4.9.3-binutils-2.25</br>1.2.8-foss-2015g</br>1.2.8-GCCcore-4.9.3</br>1.2.8-intel-2016.01</br>1.2.8-GCCcore-5.3.0</br>1.2.8-GCCcore-5.3.1-snapshot-20160419</br>1.2.8-GNU-4.9.3-2.25</br>1.2.8-GCC-4.9.3-2.25</br>1.2.8</br>1.2.8-GNU-5.1.0-2.25-intel-2015b</nobr>| -#Math +###Math |Module|Description|Available versions| |--|--|--| @@ -204,7 +205,7 @@ |**[SCOTCH](http://gforge.inria.fr/projects/scotch/)**|Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning.|<nobr>5.1.12b_esmumps-foss-2015b</br>6.0.0_esmumps-intel-2015b</br>6.0.3-intel-2015b</br>6.0.3-intel-2016.01</br>6.0.4-intel-2015b</br>6.0.4-intel-2016.01</nobr>| |**[sympy](http://sympy.org/)**|SymPy is a Python library for symbolic mathematics. It aims to become a full-featured computer algebra system (CAS) while keeping the code as simple as possible in order to be comprehensible and easily extensible. SymPy is written entirely in Python and does not require any external libraries.|<nobr>0.7.6-intel-2015b-Python-2.7.9</br>0.7.6-intel-2016.01-Python-2.7.9</br>0.7.6.1-intel-2015b-Python-2.7.11</nobr>| -#Mpi +###Mpi |Module|Description|Available versions| |--|--|--| @@ -215,7 +216,7 @@ |**[MVAPICH2](http://mvapich.cse.ohio-state.edu/overview/mvapich2/)**|This is an MPI 3.0 implementation. It is based on MPICH2 and MVICH.|<nobr>2.1-GNU-5.1.0-2.25</br>2.1-GCC-4.4.7-system</br>2.1-iccifort-2015.3.187-GNU-5.1.0-2.25</nobr>| |**[OpenMPI](http://www.open-mpi.org/)**|The Open MPI Project is an open source MPI-2 implementation.|<nobr>1.8.6-GNU-5.1.0-2.25</br>1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25</br>1.8.8-GNU-5.1.0-2.25</br>1.8.6-GCC-4.4.7-system</br>1.8.8-GNU-4.9.3-2.25</br>1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25</br>1.10.1-GCC-4.9.3-2.25</br>1.10.2-GCC-5.3.0-2.26</br>1.10.1-GNU-4.9.3-2.25</nobr>| -#Numlib +###Numlib |Module|Description|Available versions| |--|--|--| @@ -230,7 +231,7 @@ |**[ScaLAPACK](http://www.netlib.org/scalapack/)**|The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers.|<nobr>2.0.2-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015b-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2016.04-OpenBLAS-0.2.18-LAPACK-3.6.0</nobr>| |**[SuiteSparse](http://www.cise.ufl.edu/research/sparse/SuiteSparse/)**|SuiteSparse is a collection of libraries manipulate sparse matrices.|<nobr>4.4.3-intel-2015b-ParMETIS-4.0.3</br>4.4.3-intel-2016.01-ParMETIS-4.0.3</br>4.4.6-intel-2015b-ParMETIS-4.0.3</nobr>| -#Perf +###Perf |Module|Description|Available versions| |--|--|--| @@ -239,28 +240,28 @@ |**MAP**| |<nobr>4.2</br>5.0.1</nobr>| |**[OPARI2](http://www.score-p.org)**|OPARI2, the successor of Forschungszentrum Juelich's OPARI, is a source-to-source instrumentation tool for OpenMP and hybrid codes. It surrounds OpenMP directives and runtime library calls with calls to the POMP2 measurement interface.|<nobr>1.1.4-intel-2015b</br>2.0</nobr>| |**[OTF2](http://www.score-p.org)**|The Open Trace Format 2 is a highly scalable, memory efficient event trace data format plus support library. It will become the new standard trace format for Scalasca, Vampir, and Tau and is open for other tools.|<nobr>1.4-intel-2015b</br>2.0</nobr>| -|**[PAPI](http://icl.cs.utk.edu/projects/papi/)**|PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors. PAPI enables software engineers to see, in near real time, the relation between software performance and processor events. In addition Component PAPI provides access to a collection of components that expose performance measurement opportunites across the hardware and software stack.|<nobr>5.4.0-intel-2015b</br>5.4.3</nobr>| +|**[PAPI](http://icl.cs.utk.edu/projects/papi/)**|PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors. PAPI enables software engineers to see, in near real time, the relation between software performance and processor events. In addition Component PAPI provides access to a collection of components that expose performance measurement opportunites across the hardware and software stack.|<nobr>5.4.0-intel-2015b</br>5.4.3</br>5.4.3-pic</nobr>| |**perfboost**| |<nobr>1.0</nobr>| |**perfcatcher**| |<nobr>1.0</nobr>| |**PerfReports**| |<nobr>5.0.1</nobr>| |**perfsuite**| |<nobr>1a5.3</nobr>| |**[Vampir](http://www.vampir.eu)**|The Vampir software tool provides an easy-to-use framework that enables developers to quickly display and analyze arbitrary program behavior at any level of detail. The tool suite implements optimized event analysis algorithms and customizable displays that enable fast and interactive rendering of very complex performance monitoring data.|<nobr>8.5.0</nobr>| -#Phys +###Phys |Module|Description|Available versions| |--|--|--| |**[Meep](http://ab-initio.mit.edu/wiki/index.php/Meep)**|Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems.|<nobr>1.3-intel-2015b</nobr>| |**[phono3py](http://phonopy.sourceforge.net/phono3py/index.html)**|This software calculates phonon-phonon interaction related properties|<nobr>0.9.14-ictce-7.3.5-Python-2.7.9</nobr>| -#System +###System |Module|Description|Available versions| |--|--|--| |**[hwloc](http://www.open-mpi.org/projects/hwloc/)**|The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information as well as the locality of I/O devices such as network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently.|<nobr>1.11.0-GNU-5.1.0-2.25</br>1.5-GCC-4.4.7-system</br>1.11.0-GNU-4.9.3-2.25</br>1.11.1-iccifort-2015.3.187-GNU-4.9.3-2.25</br>1.11.3-GCC-5.3.0-2.26</br>1.11.2-GCC-4.9.3-2.25</br>1.11.0</nobr>| |**[libpciaccess](http://cgit.freedesktop.org/xorg/lib/libpciaccess/)**|Generic PCI access library.|<nobr>0.13.1-foss-2015g</br>0.13.1</nobr>| -#Toolchain +###Toolchain |Module|Description|Available versions| |--|--|--| @@ -274,7 +275,7 @@ |**[PRACE](http://www.prace-ri.eu/PRACE-Common-Production)**|The PRACE Common Production Environment (PCPE) is a set of software tools and libraries that are planned to be available on all PRACE execution sites. The PCPE also defines a set of environment variables that try to make compilation on all sites as homogeneous and simple as possible.|<nobr>20150630-intel-2015b</nobr>| |**[prace](http://www.prace-ri.eu/PRACE-Common-Production)**|**** PRACE Common Production Environment (PCPE) **** Initialisation of the PRACE common production environment. This allows you to assume that the following tools/libraries are available by default in your PATH/environment. * Fortran, C, C++ Compilers * MPI * BLAS, LAPACK, BLACS, ScaLAPACK * FFTW * HDF5, NetCDF The compiler commands on are: * mpif90 - Fortran compiler * mpicc - C compiler * mpicxx - C++ compiler For more information on the PCPE please see the documentation at: http://www.prace-ri.eu/PRACE-Common-Production For help using this system, please see Local User Guide available at: http://prace-ri.eu/Best-Practice-Guide-Anselm-HTML|<nobr>20160107-intel-2016.01</nobr>| -#Tools +###Tools |Module|Description|Available versions| |--|--|--| @@ -310,9 +311,9 @@ |**[VirtualGL](http://www.virtualgl.org)**|VirtualGL is an open source toolkit that gives any Unix or Linux remote display software the ability to run OpenGL applications with full 3D hardware acceleration.|<nobr>2.4.1</nobr>| |**[VTune](http://software.intel.com/en-us/intel-vtune-amplifier-xe)**|Intel VTune Amplifier XE 2016 is the premier performance profiler for C, C++, C#, Fortran, Assembly and Java.|<nobr>2016_update1</nobr>| |**[Wine](https://www.winehq.org)**|Wine (originally an acronym for "Wine Is Not an Emulator") is a compatibility layer capable of running Windows applications on several POSIX-compliant operating systems, such as Linux, Mac OSX, & BSD.|<nobr>1.7.29-GNU-5.1.0-2.25</br>1.7.29-GCC-4.4.7-system</nobr>| -|**[XZ](http://tukaani.org/xz/)**|xz: XZ utilities|<nobr>5.2.2-intel-2016.01</nobr>| +|**[XZ](http://tukaani.org/xz/)**|xz: XZ utilities|<nobr>5.2.2-intel-2016.01</br>5.2.2</nobr>| -#Vis +###Vis |Module|Description|Available versions| |--|--|--| @@ -322,7 +323,7 @@ |**[FLTK](http://www.fltk.org)**|FLTK is a cross-platform C++ GUI toolkit for UNIX/Linux (X11), Microsoft Windows, and MacOS X. FLTK provides modern GUI functionality without the bloat and supports 3D graphics via OpenGL and its built-in GLUT emulation.|<nobr>1.3.2-intel-2015b</br>1.3.2</nobr>| |**[fontconfig](http://www.freedesktop.org/software/fontconfig)**|Fontconfig is a library designed to provide system-wide font configuration, customization and application access.|<nobr>2.11.1-intel-2015b</br>2.11.1-foss-2015b</br>2.11.1</nobr>| |**[freetype](http://freetype.org)**|FreeType 2 is a software font engine that is designed to be small, efficient, highly customizable, and portable while capable of producing high-quality output (glyph images). It can be used in graphics libraries, display servers, font conversion tools, text image generation tools, and many other products as well.|<nobr>2.5.3-intel-2015b</br>2.5.3-foss-2015b</br>2.5.3-foss-2015g</br>2.5.3</nobr>| -|**[gettext](http://www.gnu.org/software/gettext/)**|GNU `gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation|<nobr>0.19.2-intel-2015b</br>0.19.2-GNU-5.1.0-2.25</br>0.19.2-foss-2015b</br>0.19.2-intel-2016.01</br>0.19.6-foss-2015g</br>0.19.6-intel-2016.01</br>0.19.2-foss-2015g</br>0.19.2</nobr>| +|**[gettext](http://www.gnu.org/software/gettext/)**|GNU `gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation|<nobr>0.19.2-intel-2015b</br>0.19.2-GNU-5.1.0-2.25</br>0.19.2-foss-2015b</br>0.19.2-intel-2016.01</br>0.19.6-foss-2015g</br>0.19.6-intel-2016.01</br>0.19.2-foss-2015g</br>0.19.2</br>0.19.6</nobr>| |**[GLib](http://www.gtk.org/)**|GLib is one of the base libraries of the GTK+ project|<nobr>2.40.0-intel-2015b</br>2.40.0-foss-2015g</br>2.40.0-intel-2016.01</br>2.40.0</nobr>| |**[GPI-2](http://www.gpi-site.com/gpi2/)**|GPI-2 is an API for the development of scalable, asynchronous and fault tolerant parallel applications.|<nobr>1.1.1-gompi-2015e-MPI</br>1.1.1-gompi-2015e</nobr>| |**[grace](http://freecode.com/projects/grace)**|Grace is a WYSIWYG 2D plotting tool for X Windows System and Motif.|<nobr>5.1.25-intel-2015b</nobr>| @@ -352,5 +353,5 @@ |**[pixman](http://www.pixman.org/)**|Pixman is a low-level software library for pixel manipulation, providing features such as image compositing and trapezoid rasterization. Important users of pixman are the cairo graphics library and the X server.|<nobr>0.32.6-intel-2015b</br>0.32.6-foss-2015b</br>0.32.6</nobr>| |**[PyQt](http://www.riverbankcomputing.co.uk/software/pyqt)**|PyQt is a set of Python v2 and v3 bindings for Digia's Qt application framework.|<nobr>4.11.3-foss-2015g-Python-2.7.9</br>4.11.4-foss-2015g-Python-2.7.9</nobr>| |**[SUMO](http://www.sumo.dlr.de/wiki/Main_Page)**|Simulation of Urban MObility (SUMO) is an open source, highly portable, microscopic and continuous road traffic simulation package designed to handle large road networks.|<nobr>0.25.0-foss-2015g</br>0.26.0-foss-2015g</br>0.27.1-foss-2015g</nobr>| -|**[Tk](http://www.tcl.tk/)**|Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages.|<nobr>8.5.12-intel-2015b</br>8.6.4-intel-2015b-no-X11</br>8.6.4-GNU-4.9.3-2.25-no-X11</br>8.6.4-GCC-4.9.3-2.25-no-X11</br>8.6.4-foss-2015b-no-X11</br>8.6.4-foss-2015g-no-X11</br>8.6.4-intel-2016.01-no-X11</br>8.6.4-no-X11</br>8.5.12</nobr>| +|**[Tk](http://www.tcl.tk/)**|Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages.|<nobr>8.5.12-intel-2015b</br>8.6.4-intel-2015b-no-X11</br>8.6.4-GNU-4.9.3-2.25-no-X11</br>8.6.4-GCC-4.9.3-2.25-no-X11</br>8.6.4-foss-2015b-no-X11</br>8.6.4-foss-2015g-no-X11</br>8.6.4-intel-2016.01-no-X11</br>8.6.4-no-X11</br>8.5.12</br>8.6.3</nobr>| |**[VisIt](https://wci.llnl.gov/simulation/computer-codes/visit)**|VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool|<nobr>2.10.0</nobr>|