From 6c3bb99c864567aae15bd248599d4cbe68080fb0 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Pavel=20Jir=C3=A1sek?= <pavel.jirasek@vsb.cz>
Date: Wed, 25 Jan 2017 10:22:29 +0100
Subject: [PATCH] links
---
.../software/numerical-libraries/petsc.md | 4 ++--
.../software/omics-master/priorization-component-bierapp.md | 2 +-
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/docs.it4i/anselm-cluster-documentation/software/numerical-libraries/petsc.md b/docs.it4i/anselm-cluster-documentation/software/numerical-libraries/petsc.md
index 8cdcd2b8e..3be05fe85 100644
--- a/docs.it4i/anselm-cluster-documentation/software/numerical-libraries/petsc.md
+++ b/docs.it4i/anselm-cluster-documentation/software/numerical-libraries/petsc.md
@@ -25,7 +25,7 @@ You can start using PETSc on Anselm by loading the PETSc module. Module names ob
module load petsc/3.4.4-icc-impi-mkl-opt
```
-where `variant` is replaced by one of `{dbg, opt, threads-dbg, threads-opt}`. The `opt` variant is compiled without debugging information (no `-g` option) and with aggressive compiler optimizations (`-O3 -xAVX`). This variant is suitable for performance measurements and production runs. In all other cases use the debug (`dbg`) variant, because it contains debugging information, performs validations and self-checks, and provides a clear stack trace and message in case of an error. The other two variants `threads-dbg` and `threads-opt` are `dbg` and `opt`, respectively, built with [OpenMP and pthreads threading support](http://www.mcs.anl.gov/petsc/features/threads.html).
+where `variant` is replaced by one of `{dbg, opt, threads-dbg, threads-opt}`. The `opt` variant is compiled without debugging information (no `-g` option) and with aggressive compiler optimizations (`-O3 -xAVX`). This variant is suitable for performance measurements and production runs. In all other cases use the debug (`dbg`) variant, because it contains debugging information, performs validations and self-checks, and provides a clear stack trace and message in case of an error. The other two variants `threads-dbg` and `threads-opt` are `dbg` and `opt`, respectively, built with [OpenMP and pthreads threading support](https://www.mcs.anl.gov/petsc/miscellaneous/petscthreads.html).
External libraries
------------------
@@ -57,6 +57,6 @@ All these libraries can be used also alone, without PETSc. Their static or share
- [ParMETIS](http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview)
- [PT-Scotch](http://www.labri.fr/perso/pelegrin/scotch/)
- preconditioners & multigrid
- - [Hypre](http://acts.nersc.gov/hypre/)
+ - [Hypre](http://www.nersc.gov/users/software/programming-libraries/math-libraries/petsc/)
- [Trilinos ML](http://trilinos.sandia.gov/packages/ml/)
- [SPAI - Sparse Approximate Inverse](https://bitbucket.org/petsc/pkg-spai)
diff --git a/docs.it4i/anselm-cluster-documentation/software/omics-master/priorization-component-bierapp.md b/docs.it4i/anselm-cluster-documentation/software/omics-master/priorization-component-bierapp.md
index 8b5cb8cf6..3c2c24cd0 100644
--- a/docs.it4i/anselm-cluster-documentation/software/omics-master/priorization-component-bierapp.md
+++ b/docs.it4i/anselm-cluster-documentation/software/omics-master/priorization-component-bierapp.md
@@ -3,7 +3,7 @@ Prioritization component (BiERapp)
### Access
-BiERapp is available at the following address: <http://omics.it4i.cz/bierapp/>
+BiERapp is available at the [following address](http://omics.it4i.cz/bierapp/)
!!! Note "Note"
The address is accessible onlyvia VPN.
--
GitLab