From 177a397b576787910d932c072f88539b01773002 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jan=20Ko=C5=BEusznik?= <jan@kozusznik.cz>
Date: Tue, 11 Dec 2018 13:18:45 +0100
Subject: [PATCH] modify config.yaml - small modification for paths
---
haas-imagej-client/src/main/resources/config.yaml | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/haas-imagej-client/src/main/resources/config.yaml b/haas-imagej-client/src/main/resources/config.yaml
index cfa20e6d..f141cc56 100644
--- a/haas-imagej-client/src/main/resources/config.yaml
+++ b/haas-imagej-client/src/main/resources/config.yaml
@@ -202,14 +202,14 @@ common: {
# sysconfcpus
# ============================================================================
# current working Fiji
- fiji-app: "opt/Fiji.app/ImageJ-linux64 -Xss4m",
+ fiji-app: "/opt/Fiji.app/ImageJ-linux64 -Xss4m",
# bean shell scripts and Snakefile
- bsh_directory: "opt/snakemake-workflows/spim_registration/timelapse/",
+ bsh_directory: "/opt/snakemake-workflows/spim_registration/timelapse/",
# Directory that contains the cuda libraries
directory_cuda: "/sw/users/schmied/cuda/",
# xvfb
fiji-prefix: "",
- sysconfcpus: "opt/bin/sysconfcpus -n",
+ sysconfcpus: "sysconfcpus -n",
memory-prefix: "-Xmx"
}
--
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