diff --git a/haas-imagej-client/src/main/resources/config.yaml b/haas-imagej-client/src/main/resources/config.yaml index 80dddfef838e1724b33d35d5051b323a608d3eab..23bfbc9d8099cf8c925036987bfbb5f751bf71d7 100644 --- a/haas-imagej-client/src/main/resources/config.yaml +++ b/haas-imagej-client/src/main/resources/config.yaml @@ -199,7 +199,7 @@ common: { # beanshell and snakefile diretory # directory for cuda libraries # xvfb setting - sysconfcpus: "/scratch/work/project/open-12-20/haas/spim/bin/sysconfcpus -n", + # sysconfcpus # ============================================================================ # current working Fiji fiji-app: "/scratch/work/project/open-12-20/haas/spim/Fiji.app/ImageJ-linux64 -Xss4m", diff --git a/haas-java-client/src/main/java/cz/it4i/fiji/haas_java_client/JobInfo.java b/haas-java-client/src/main/java/cz/it4i/fiji/haas_java_client/JobInfo.java index 07b7517ed4e341711e050112a04e84b165139cb5..523370a5a2e414768b12e8028f0db8d0504534a8 100644 --- a/haas-java-client/src/main/java/cz/it4i/fiji/haas_java_client/JobInfo.java +++ b/haas-java-client/src/main/java/cz/it4i/fiji/haas_java_client/JobInfo.java @@ -6,7 +6,6 @@ import java.util.List; public interface JobInfo { - Collection<Long> getTasks(); JobState getState(); diff --git a/haas-spim-benchmark/src/main/java/cz/it4i/fiji/haas_spim_benchmark/core/Constants.java b/haas-spim-benchmark/src/main/java/cz/it4i/fiji/haas_spim_benchmark/core/Constants.java index 500fbdfb10cce3996736750771c565c15b55e925..dd5df44db5aa870aad65cf94e2cb15ae41a1378f 100644 --- a/haas-spim-benchmark/src/main/java/cz/it4i/fiji/haas_spim_benchmark/core/Constants.java +++ b/haas-spim-benchmark/src/main/java/cz/it4i/fiji/haas_spim_benchmark/core/Constants.java @@ -14,7 +14,7 @@ public interface Constants { String HAAS_JOB_NAME = "HaaSSPIMBenchmark"; int HAAS_CLUSTER_NODE_TYPE = 7; int HAAS_TEMPLATE_ID = 4; - String HAAS_PROJECT_ID = ""; + String HAAS_PROJECT_ID = "DD-18-42"; int HAAS_TIMEOUT = 3600; //Walltime in seconds long WAIT_FOR_SUBMISSION_TIMEOUT = 100; String BDS_ADDRESS = "http://julius2.it4i.cz/"; diff --git a/java-scpclient/src/main/java/cz/it4i/fiji/scpclient/ScpClient.java b/java-scpclient/src/main/java/cz/it4i/fiji/scpclient/ScpClient.java index 9290ea269a6e7f2110e29d49525fb90496faa10c..cbcfc0f167898e0da975439476409618f29bd0d5 100644 --- a/java-scpclient/src/main/java/cz/it4i/fiji/scpclient/ScpClient.java +++ b/java-scpclient/src/main/java/cz/it4i/fiji/scpclient/ScpClient.java @@ -402,7 +402,7 @@ public class ScpClient implements Closeable { IOException, InterruptedIOException { AckowledgementChecker ack = new AckowledgementChecker(); - boolean ptimestamp = true; + boolean ptimestamp = false; // exec 'scp -t rfile' remotely String command = "scp " + (ptimestamp ? "-p" : "") + " -t '" + fileName + "'"; Channel channel = getConnectedSession().openChannel("exec");