From 2fc0c44d8d72f21117066557d249d9594b8e38dd Mon Sep 17 00:00:00 2001
From: Petr Bainar <petr.bainar@hotmail.com>
Date: Tue, 11 Dec 2018 11:45:08 +0100
Subject: [PATCH] migration-dd-18-42: address pull request comments
---
haas-imagej-client/src/main/resources/config.yaml | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/haas-imagej-client/src/main/resources/config.yaml b/haas-imagej-client/src/main/resources/config.yaml
index 98e86e13..cfa20e6d 100644
--- a/haas-imagej-client/src/main/resources/config.yaml
+++ b/haas-imagej-client/src/main/resources/config.yaml
@@ -202,14 +202,14 @@ common: {
# sysconfcpus
# ============================================================================
# current working Fiji
- fiji-app: "/scratch/work/project/dd-18-42/apps/haas/spim/Fiji.app/ImageJ-linux64 -Xss4m",
+ fiji-app: "opt/Fiji.app/ImageJ-linux64 -Xss4m",
# bean shell scripts and Snakefile
- bsh_directory: "/scratch/work/project/dd-18-42/apps/haas/spim/snakemake-workflows/spim_registration/timelapse/",
+ bsh_directory: "opt/snakemake-workflows/spim_registration/timelapse/",
# Directory that contains the cuda libraries
directory_cuda: "/sw/users/schmied/cuda/",
# xvfb
fiji-prefix: "",
- sysconfcpus: "/scratch/work/project/dd-18-42/apps/haas/spim/bin/sysconfcpus -n",
+ sysconfcpus: "opt/bin/sysconfcpus -n",
memory-prefix: "-Xmx"
}
--
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