diff --git a/spim_registration/timelapse/README.md b/spim_registration/timelapse/README.md index e9c548613ea1a7fc4c68a35a3417d2628bfa2a70..8db3cc3d58c6ce57cd93fab6f9912129a847b8ff 100644 --- a/spim_registration/timelapse/README.md +++ b/spim_registration/timelapse/README.md @@ -106,3 +106,8 @@ If not: ```bash snakemake -j2 -d /path/to/data/ --cluster-config ./cluster.json --cluster "bsub -q {cluster.lsf_q} {cluster.lsf_extra}" ``` +Submitting Jobs +--------------- + +The log files are written into a new directory in the data directory called "logs". +The log files are ordered according to their position in the workflow. Multiple or alternative steps in the pipeline are indicated by numbers.