From 24721c58392f437e78ea92be4197002019ae54ff Mon Sep 17 00:00:00 2001
From: Peter Steinbach <steinbach@scionics.de>
Date: Thu, 4 Jun 2015 14:00:46 +0200
Subject: [PATCH] removed superfluous line in define_xml_tif; fixed directory
name
---
spim_registration/timelapse/tomancak_test_cluster.json | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/spim_registration/timelapse/tomancak_test_cluster.json b/spim_registration/timelapse/tomancak_test_cluster.json
index 7c95b1f..495ad8d 100644
--- a/spim_registration/timelapse/tomancak_test_cluster.json
+++ b/spim_registration/timelapse/tomancak_test_cluster.json
@@ -5,7 +5,7 @@
"fiji-prefix" : "/sw/bin/xvfb-run -a",
"directory_cuda" : "/lustre/projects/hpcsupport/steinbac/unicore/christopher/unicore_jobs/Fiji.app.cuda_new/lib/",
"merged_xml" : "hdf5_test_unicore_merge",
- "bsh_directory" : "/home/steinbac/development/cschmied-snakemake-workflows/spim_registration/timelapse/",
+ "bsh_directory" : "/home/steinbac/development/schmied-snakemake-workflows/spim_registration/timelapse/",
"first_xml_filename" : "test_unicore",
"hdf5_xml_filename" : "\"hdf5_test_unicore\"",
"fusion_switch" : "deconvolution",
@@ -33,7 +33,6 @@
"define_xml_tif" :
{
- "timepoints" : "0-4",
"acquisition_angles" : "0,72,144,216,288",
"channels" : "0",
"image_file_pattern" : "img_TL{{t}}_Angle{{a}}.tif",
--
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