diff --git a/spim_registration/timelapse/Snakefile b/spim_registration/timelapse/Snakefile index 4aa60faf892e87aa115655ef16b79c09ffde1510..c150fd4da4729c383849fd336816127e133ad833 100755 --- a/spim_registration/timelapse/Snakefile +++ b/spim_registration/timelapse/Snakefile @@ -27,6 +27,10 @@ rule done: input: [ ds + "_output_hdf5" for ds in datasets ] #input: [ ds + "_fusion" for ds in datasets ] +localrules: define_xml_czi, define_xml_tif, hdf5_xml, xml_merge, timelapse, + duplicate_transformations, external_transform, define_output, + hdf5_xml_output + rule resave_prepared: input: expand("{dataset}.{suffix}",dataset=[ config["common"]["hdf5_xml_filename"] ], suffix=["xml","h5"])