diff --git a/mkdocs.yml b/mkdocs.yml index 4015af107aaa83b924b5f9bf5445ce19904efa1d..f7c7db34867743e589978f855d74fb3f08c7f40b 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -57,135 +57,48 @@ pages: - Storage: anselm/storage.md - Network: anselm/network.md - PRACE User Support: anselm/prace.md - - 'Software': - - Lmod Environment: software/lmod.md - - Modules Matrix: modules-matrix.md - - Job Features: job-features.md - - Singularity Container: software/singularity.md - - EasyBuild: software/easybuild.md - - Spack: software/spack.md - - Salomon Software: - - Available Modules: modules-salomon.md - - Available Modules on UV: modules-salomon-uv.md - - 'Machine learning': - - Introduction: salomon/software/machine-learning/introduction.md - - TensorFlow: salomon/software/machine-learning/tensorflow.md - - 'ANSYS': - - Introduction: salomon/software/ansys/ansys.md - - ANSYS CFX: salomon/software/ansys/ansys-cfx.md - - ANSYS Fluent: salomon/software/ansys/ansys-fluent.md - - ANSYS LS-DYNA: salomon/software/ansys/ansys-ls-dyna.md - - ANSYS MAPDL: salomon/software/ansys/ansys-mechanical-apdl.md - - Workbench: salomon/software/ansys/workbench.md - - Setting License Preferences: salomon/software/ansys/licensing.md - - Licensing and Available Versions: salomon/software/ansys/setting-license-preferences.md - - 'Bioinformatics': - - Bioinformatics Applications: software/bioinformatics.md - - 'Chemistry': - - Molpro: salomon/software/chemistry/molpro.md - - NWChem: salomon/software/chemistry/nwchem.md - - Phono3py: salomon/software/chemistry/phono3py.md - - ORCA: software/orca.md - - Compilers: salomon/software/compilers.md - - 'COMSOL': - - COMSOL: salomon/software/comsol/comsol-multiphysics.md - - Licensing and Available Versions: salomon/software/comsol/licensing-and-available-versions.md - - 'Debuggers': - - Introduction: salomon/software/debuggers/Introduction.md - - Aislinn: salomon/software/debuggers/aislinn.md - - Allinea Forge (DDT,MAP): salomon/software/debuggers/allinea-ddt.md - - Allinea Performance Reports: salomon/software/debuggers/allinea-performance-reports.md - - Intel VTune Amplifier XE: salomon/software/debuggers/intel-vtune-amplifier.md - - Total View: salomon/software/debuggers/total-view.md - - Valgrind: salomon/software/debuggers/valgrind.md - - Vampir: salomon/software/debuggers/vampir.md - - 'Intel Suite': - - Introduction: salomon/software/intel-suite/intel-parallel-studio-introduction.md - - Intel Advisor: salomon/software/intel-suite/intel-advisor.md - - Intel Compilers: salomon/software/intel-suite/intel-compilers.md - - Intel Debugger: salomon/software/intel-suite/intel-debugger.md - - Intel IPP: salomon/software/intel-suite/intel-integrated-performance-primitives.md - - Intel Inspector: salomon/software/intel-suite/intel-inspector.md - - Intel MKL: salomon/software/intel-suite/intel-mkl.md - - Intel TBB: salomon/software/intel-suite/intel-tbb.md - - Intel Trace Analyzer and Collector: salomon/software/intel-suite/intel-trace-analyzer-and-collector.md - - Intel Xeon Phi: salomon/software/intel-xeon-phi.md - - Java: salomon/software/java.md - - 'MPI': - - Introduction: salomon/software/mpi/mpi.md - - MPI4Py (MPI for Python): salomon/software/mpi/mpi4py-mpi-for-python.md - - Running Open MPI: salomon/software/mpi/Running_OpenMPI.md - - 'Numerical Languages': - - Introduction: salomon/software/numerical-languages/introduction.md - - Matlab: salomon/software/numerical-languages/matlab.md - - Octave: salomon/software/numerical-languages/octave.md - - R: salomon/software/numerical-languages/r.md - - OpenCoarrays: salomon/software/numerical-languages/opencoarrays.md - - Operating System: salomon/software/operating-system.md - - ParaView: salomon/software/paraview.md - - Anselm Software: - - Available Modules: modules-anselm.md - - 'Machine learning': - - Introduction: anselm/software/machine-learning/introduction.md - - TensorFlow: anselm/software/machine-learning/tensorflow.md - - 'ANSYS': - - Introduction: anselm/software/ansys/ansys.md - - ANSYS CFX: anselm/software/ansys/ansys-cfx.md - - ANSYS Fluent: anselm/software/ansys/ansys-fluent.md - - ANSYS LS-DYNA: anselm/software/ansys/ansys-ls-dyna.md - - ANSYS MAPDL: anselm/software/ansys/ansys-mechanical-apdl.md - - LS-DYNA: anselm/software/ansys/ls-dyna.md - - 'Bioinformatics': - - Bioinformatics Applications: software/bioinformatics.md - - 'Debuggers': - - Allinea Forge (DDT,MAP): anselm/software/debuggers/allinea-ddt.md - - Allinea Performance Reports: anselm/software/debuggers/allinea-performance-reports.md - - CUBE: anselm/software/debuggers/cube.md - - Intel Performance Counter Monitor: anselm/software/debuggers/intel-performance-counter-monitor.md - - Intel VTune Amplifier: anselm/software/debuggers/intel-vtune-amplifier.md - - PAPI: anselm/software/debuggers/papi.md - - Scalasca: anselm/software/debuggers/scalasca.md - - Score-P: anselm/software/debuggers/score-p.md - - Total View: anselm/software/debuggers/total-view.md - - VNC: anselm/software/debuggers/debuggers.md - - Valgrind: anselm/software/debuggers/valgrind.md - - Vampir: anselm/software/debuggers/vampir.md - - 'Chemistry': - - Molpro: anselm/software/chemistry/molpro.md - - NWChem: anselm/software/chemistry/nwchem.md - - ORCA: software/orca.md - - COMSOL: anselm/software/comsol-multiphysics.md - - Compilers: anselm/software/compilers.md - - GPI-2: anselm/software/gpi2.md - - 'Intel Suite': - - Introduction: anselm/software/intel-suite/introduction.md - - Intel Compilers: anselm/software/intel-suite/intel-compilers.md - - Intel Debugger: anselm/software/intel-suite/intel-debugger.md - - Intel IPP: anselm/software/intel-suite/intel-integrated-performance-primitives.md - - Intel MKL: anselm/software/intel-suite/intel-mkl.md - - Intel TBB: anselm/software/intel-suite/intel-tbb.md - - Intel Xeon Phi: anselm/software/intel-xeon-phi.md - - ISV Licenses: anselm/software/isv_licenses.md - - Java: anselm/software/java.md - - 'MPI': - - Introduction: anselm/software/mpi/mpi.md - - MPI4Py (MPI for Python): anselm/software/mpi/mpi4py-mpi-for-python.md - - Running Open MPI: anselm/software/mpi/Running_OpenMPI.md - - Running MPICH2: anselm/software/mpi/running-mpich2.md - - 'Numerical Languages': - - Introduction: anselm/software/numerical-languages/introduction.md - - Matlab 2013-2014: anselm/software/numerical-languages/matlab_1314.md - - Matlab: anselm/software/numerical-languages/matlab.md - - Octave: anselm/software/numerical-languages/octave.md - - R: anselm/software/numerical-languages/r.md - - 'Numerical Libraries': - - FFTW: anselm/software/numerical-libraries/fftw.md - - GSL: anselm/software/numerical-libraries/gsl.md - - HDF5: anselm/software/numerical-libraries/hdf5.md - - Intel Numerical Libraries: anselm/software/numerical-libraries/intel-numerical-libraries.md - - MAGMA for Intel Xeon Phi: anselm/software/numerical-libraries/magma-for-intel-xeon-phi.md - - PETSc: anselm/software/numerical-libraries/petsc.md - - Trilinos: anselm/software/numerical-libraries/trilinos.md + - Software: + - Modules: + - Lmod Environment: software/modules/lmod.md + - Intel Xeon Phi Environment: software/mic/mic_environment.md + - Modules Matrix: modules-matrix.md + - Job Features: job-features.md + - Available Salomon Modules: modules-salomon.md + - Available Salomon Modules on UV: modules-salomon-uv.md + - Available Salomon Modules on PHI Cards: modules-salomon-phi.md + - Available Anselm Modules: modules-anselm.md + - ISV Licenses: software/isv_licenses.md + - Bioinformatics: + - Bioinformatics Applications: software/bio/bioinformatics.md + - Omics Master: + - Overview: software/bio/omics-master/overview.md + - Diagnostic Component (TEAM): software/bio/omics-master/diagnostic-component-team.md + - Priorization Component (BiERApp): software/bio/omics-master/priorization-component-bierapp.md + - CAE: + - COMSOL: + - COMSOL: software/cae/comsol/comsol-multiphysics.md + - Licensing and Available Versions: software/cae/comsol/licensing-and-available-versions.md + - Chemistry: + - Molpro: software/chemistry/molpro.md + - Orca: software/chemistry/orca.md + - NWChem: software/chemistry/nwchem.md + - Phono3py: software/chemistry/phono3py.md + - Compilers: software/compilers.md + - Debuggers: + - Introduction: software/debuggers/Introduction.md + - Aislinn: software/debuggers/aislinn.md + - Allinea Forge (DDT,MAP): software/debuggers/allinea-ddt.md + - Allinea Performance Reports: software/debuggers/allinea-performance-reports.md + - CUBE: software/debuggers/cube.md + - Intel Performance Counter Monitor: software/debuggers/intel-performance-counter-monitor.md + - Intel VTune Amplifier XE: software/debuggers/intel-vtune-amplifier.md + - PAPI: software/debuggers/papi.md + - Scalasca: software/debuggers/scalasca.md + - Score-P: software/debuggers/score-p.md + - Total View: software/debuggers/total-view.md + - Valgrind: software/debuggers/valgrind.md + - Vampir: software/debuggers/vampir.md + - GPU: - NVIDIA CUDA: anselm/software/nvidia-cuda.md - Intel: - Intel Suite: @@ -285,4 +198,4 @@ markdown_extensions: google_analytics: - 'UA-90498826-1' - - 'auto' + - 'auto' \ No newline at end of file