diff --git a/Doxyfile b/Doxyfile
index b70fc203828d0883f952d9dcfa6eddd6f2a28934..ef0669e86ec99b4dc92f337f1de0aede6be3f31c 100644
--- a/Doxyfile
+++ b/Doxyfile
@@ -1,4 +1,4 @@
-# Doxyfile 1.8.14
+# Doxyfile 1.8.13
 
 # This file describes the settings to be used by the documentation system
 # doxygen (www.doxygen.org) for a project.
@@ -20,8 +20,8 @@
 # This tag specifies the encoding used for all characters in the config file
 # that follow. The default is UTF-8 which is also the encoding used for all text
 # before the first occurrence of this tag. Doxygen uses libiconv (or the iconv
-# built into libc) for the transcoding. See
-# https://www.gnu.org/software/libiconv/ for the list of possible encodings.
+# built into libc) for the transcoding. See http://www.gnu.org/software/libiconv
+# for the list of possible encodings.
 # The default value is: UTF-8.
 
 DOXYFILE_ENCODING      = UTF-8
@@ -32,13 +32,13 @@ DOXYFILE_ENCODING      = UTF-8
 # title of most generated pages and in a few other places.
 # The default value is: My Project.
 
-PROJECT_NAME           = "lib4neuro"
+PROJECT_NAME           = lib4neuro
 
 # The PROJECT_NUMBER tag can be used to enter a project or revision number. This
 # could be handy for archiving the generated documentation or if some version
 # control system is used.
 
-PROJECT_NUMBER         =
+PROJECT_NUMBER         = 
 
 # Using the PROJECT_BRIEF tag one can provide an optional one line description
 # for a project that appears at the top of each page and should give viewer a
@@ -51,14 +51,14 @@ PROJECT_BRIEF          = "Massivelly-parallel neural networks library"
 # pixels and the maximum width should not exceed 200 pixels. Doxygen will copy
 # the logo to the output directory.
 
-PROJECT_LOGO           = "img/lib4neuro_logo.png"
+PROJECT_LOGO           = /home/martin/4Neuro/img/lib4neuro_logo.png
 
 # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
 # into which the generated documentation will be written. If a relative path is
 # entered, it will be relative to the location where doxygen was started. If
 # left blank the current directory will be used.
 
-OUTPUT_DIRECTORY       = "docs"
+OUTPUT_DIRECTORY       = /home/martin/4Neuro/docs
 
 # If the CREATE_SUBDIRS tag is set to YES then doxygen will create 4096 sub-
 # directories (in 2 levels) under the output directory of each output format and
@@ -162,7 +162,7 @@ FULL_PATH_NAMES        = YES
 # will be relative from the directory where doxygen is started.
 # This tag requires that the tag FULL_PATH_NAMES is set to YES.
 
-STRIP_FROM_PATH        =
+STRIP_FROM_PATH        = 
 
 # The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of the
 # path mentioned in the documentation of a class, which tells the reader which
@@ -171,7 +171,7 @@ STRIP_FROM_PATH        =
 # specify the list of include paths that are normally passed to the compiler
 # using the -I flag.
 
-STRIP_FROM_INC_PATH    =
+STRIP_FROM_INC_PATH    = 
 
 # If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter (but
 # less readable) file names. This can be useful is your file systems doesn't
@@ -238,13 +238,13 @@ TAB_SIZE               = 4
 # "Side Effects:". You can put \n's in the value part of an alias to insert
 # newlines.
 
-ALIASES                =
+ALIASES                = 
 
 # This tag can be used to specify a number of word-keyword mappings (TCL only).
 # A mapping has the form "name=value". For example adding "class=itcl::class"
 # will allow you to use the command class in the itcl::class meaning.
 
-TCL_SUBST              =
+TCL_SUBST              = 
 
 # Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C sources
 # only. Doxygen will then generate output that is more tailored for C. For
@@ -291,7 +291,7 @@ OPTIMIZE_OUTPUT_VHDL   = NO
 # Note that for custom extensions you also need to set FILE_PATTERNS otherwise
 # the files are not read by doxygen.
 
-EXTENSION_MAPPING      =
+EXTENSION_MAPPING      = 
 
 # If the MARKDOWN_SUPPORT tag is enabled then doxygen pre-processes all comments
 # according to the Markdown format, which allows for more readable
@@ -337,7 +337,7 @@ BUILTIN_STL_SUPPORT    = NO
 CPP_CLI_SUPPORT        = NO
 
 # Set the SIP_SUPPORT tag to YES if your project consists of sip (see:
-# https://www.riverbankcomputing.com/software/sip/intro) sources only. Doxygen
+# http://www.riverbankcomputing.co.uk/software/sip/intro) sources only. Doxygen
 # will parse them like normal C++ but will assume all classes use public instead
 # of private inheritance when no explicit protection keyword is present.
 # The default value is: NO.
@@ -435,13 +435,13 @@ LOOKUP_CACHE_SIZE      = 0
 # normally produced when WARNINGS is set to YES.
 # The default value is: NO.
 
-EXTRACT_ALL            = NO
+EXTRACT_ALL            = YES
 
 # If the EXTRACT_PRIVATE tag is set to YES, all private members of a class will
 # be included in the documentation.
 # The default value is: NO.
 
-EXTRACT_PRIVATE        = YES
+EXTRACT_PRIVATE        = NO
 
 # If the EXTRACT_PACKAGE tag is set to YES, all members with package or internal
 # scope will be included in the documentation.
@@ -453,7 +453,7 @@ EXTRACT_PACKAGE        = NO
 # included in the documentation.
 # The default value is: NO.
 
-EXTRACT_STATIC         = YES
+EXTRACT_STATIC         = NO
 
 # If the EXTRACT_LOCAL_CLASSES tag is set to YES, classes (and structs) defined
 # locally in source files will be included in the documentation. If set to NO,
@@ -524,7 +524,7 @@ INTERNAL_DOCS          = NO
 # and Mac users are advised to set this option to NO.
 # The default value is: system dependent.
 
-CASE_SENSE_NAMES       = YES
+CASE_SENSE_NAMES       = NO
 
 # If the HIDE_SCOPE_NAMES tag is set to NO then doxygen will show members with
 # their full class and namespace scopes in the documentation. If set to YES, the
@@ -648,7 +648,7 @@ GENERATE_DEPRECATEDLIST= YES
 # sections, marked by \if <section_label> ... \endif and \cond <section_label>
 # ... \endcond blocks.
 
-ENABLED_SECTIONS       =
+ENABLED_SECTIONS       = 
 
 # The MAX_INITIALIZER_LINES tag determines the maximum number of lines that the
 # initial value of a variable or macro / define can have for it to appear in the
@@ -690,7 +690,7 @@ SHOW_NAMESPACES        = YES
 # by doxygen. Whatever the program writes to standard output is used as the file
 # version. For an example see the documentation.
 
-FILE_VERSION_FILTER    =
+FILE_VERSION_FILTER    = 
 
 # The LAYOUT_FILE tag can be used to specify a layout file which will be parsed
 # by doxygen. The layout file controls the global structure of the generated
@@ -703,17 +703,17 @@ FILE_VERSION_FILTER    =
 # DoxygenLayout.xml, doxygen will parse it automatically even if the LAYOUT_FILE
 # tag is left empty.
 
-LAYOUT_FILE            =
+LAYOUT_FILE            = 
 
 # The CITE_BIB_FILES tag can be used to specify one or more bib files containing
 # the reference definitions. This must be a list of .bib files. The .bib
 # extension is automatically appended if omitted. This requires the bibtex tool
-# to be installed. See also https://en.wikipedia.org/wiki/BibTeX for more info.
+# to be installed. See also http://en.wikipedia.org/wiki/BibTeX for more info.
 # For LaTeX the style of the bibliography can be controlled using
 # LATEX_BIB_STYLE. To use this feature you need bibtex and perl available in the
 # search path. See also \cite for info how to create references.
 
-CITE_BIB_FILES         =
+CITE_BIB_FILES         = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to warning and progress messages
@@ -778,7 +778,7 @@ WARN_FORMAT            = "$file:$line: $text"
 # messages should be written. If left blank the output is written to standard
 # error (stderr).
 
-WARN_LOGFILE           =
+WARN_LOGFILE           = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to the input files
@@ -790,12 +790,12 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = "src"
+INPUT                  = /home/martin/4Neuro/src
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
 # libiconv (or the iconv built into libc) for the transcoding. See the libiconv
-# documentation (see: https://www.gnu.org/software/libiconv/) for the list of
+# documentation (see: http://www.gnu.org/software/libiconv) for the list of
 # possible encodings.
 # The default value is: UTF-8.
 
@@ -873,7 +873,7 @@ RECURSIVE              = YES
 # Note that relative paths are relative to the directory from which doxygen is
 # run.
 
-EXCLUDE                =
+EXCLUDE                = 
 
 # The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
 # directories that are symbolic links (a Unix file system feature) are excluded
@@ -889,7 +889,7 @@ EXCLUDE_SYMLINKS       = NO
 # Note that the wildcards are matched against the file with absolute path, so to
 # exclude all test directories for example use the pattern */test/*
 
-EXCLUDE_PATTERNS       =
+EXCLUDE_PATTERNS       = 
 
 # The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names
 # (namespaces, classes, functions, etc.) that should be excluded from the
@@ -900,13 +900,13 @@ EXCLUDE_PATTERNS       =
 # Note that the wildcards are matched against the file with absolute path, so to
 # exclude all test directories use the pattern */test/*
 
-EXCLUDE_SYMBOLS        =
+EXCLUDE_SYMBOLS        = 
 
 # The EXAMPLE_PATH tag can be used to specify one or more files or directories
 # that contain example code fragments that are included (see the \include
 # command).
 
-EXAMPLE_PATH           =
+EXAMPLE_PATH           = 
 
 # If the value of the EXAMPLE_PATH tag contains directories, you can use the
 # EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp and
@@ -926,7 +926,7 @@ EXAMPLE_RECURSIVE      = NO
 # that contain images that are to be included in the documentation (see the
 # \image command).
 
-IMAGE_PATH             =
+IMAGE_PATH             = 
 
 # The INPUT_FILTER tag can be used to specify a program that doxygen should
 # invoke to filter for each input file. Doxygen will invoke the filter program
@@ -947,7 +947,7 @@ IMAGE_PATH             =
 # need to set EXTENSION_MAPPING for the extension otherwise the files are not
 # properly processed by doxygen.
 
-INPUT_FILTER           =
+INPUT_FILTER           = 
 
 # The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
 # basis. Doxygen will compare the file name with each pattern and apply the
@@ -960,7 +960,7 @@ INPUT_FILTER           =
 # need to set EXTENSION_MAPPING for the extension otherwise the files are not
 # properly processed by doxygen.
 
-FILTER_PATTERNS        =
+FILTER_PATTERNS        = 
 
 # If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using
 # INPUT_FILTER) will also be used to filter the input files that are used for
@@ -975,14 +975,14 @@ FILTER_SOURCE_FILES    = NO
 # *.ext= (so without naming a filter).
 # This tag requires that the tag FILTER_SOURCE_FILES is set to YES.
 
-FILTER_SOURCE_PATTERNS =
+FILTER_SOURCE_PATTERNS = 
 
 # If the USE_MDFILE_AS_MAINPAGE tag refers to the name of a markdown file that
 # is part of the input, its contents will be placed on the main page
 # (index.html). This can be useful if you have a project on for instance GitHub
 # and want to reuse the introduction page also for the doxygen output.
 
-USE_MDFILE_AS_MAINPAGE =
+USE_MDFILE_AS_MAINPAGE = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to source browsing
@@ -995,7 +995,7 @@ USE_MDFILE_AS_MAINPAGE =
 # also VERBATIM_HEADERS is set to NO.
 # The default value is: NO.
 
-SOURCE_BROWSER         = NO
+SOURCE_BROWSER         = YES
 
 # Setting the INLINE_SOURCES tag to YES will include the body of functions,
 # classes and enums directly into the documentation.
@@ -1043,7 +1043,7 @@ SOURCE_TOOLTIPS        = YES
 # If the USE_HTAGS tag is set to YES then the references to source code will
 # point to the HTML generated by the htags(1) tool instead of doxygen built-in
 # source browser. The htags tool is part of GNU's global source tagging system
-# (see https://www.gnu.org/software/global/global.html). You will need version
+# (see http://www.gnu.org/software/global/global.html). You will need version
 # 4.8.6 or higher.
 #
 # To use it do the following:
@@ -1070,6 +1070,25 @@ USE_HTAGS              = NO
 
 VERBATIM_HEADERS       = YES
 
+# If the CLANG_ASSISTED_PARSING tag is set to YES then doxygen will use the
+# clang parser (see: http://clang.llvm.org/) for more accurate parsing at the
+# cost of reduced performance. This can be particularly helpful with template
+# rich C++ code for which doxygen's built-in parser lacks the necessary type
+# information.
+# Note: The availability of this option depends on whether or not doxygen was
+# generated with the -Duse-libclang=ON option for CMake.
+# The default value is: NO.
+
+CLANG_ASSISTED_PARSING = NO
+
+# If clang assisted parsing is enabled you can provide the compiler with command
+# line options that you would normally use when invoking the compiler. Note that
+# the include paths will already be set by doxygen for the files and directories
+# specified with INPUT and INCLUDE_PATH.
+# This tag requires that the tag CLANG_ASSISTED_PARSING is set to YES.
+
+CLANG_OPTIONS          = 
+
 #---------------------------------------------------------------------------
 # Configuration options related to the alphabetical class index
 #---------------------------------------------------------------------------
@@ -1094,7 +1113,7 @@ COLS_IN_ALPHA_INDEX    = 5
 # while generating the index headers.
 # This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
 
-IGNORE_PREFIX          =
+IGNORE_PREFIX          = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to the HTML output
@@ -1138,7 +1157,7 @@ HTML_FILE_EXTENSION    = .html
 # of the possible markers and block names see the documentation.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_HEADER            =
+HTML_HEADER            = 
 
 # The HTML_FOOTER tag can be used to specify a user-defined HTML footer for each
 # generated HTML page. If the tag is left blank doxygen will generate a standard
@@ -1148,7 +1167,7 @@ HTML_HEADER            =
 # that doxygen normally uses.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_FOOTER            =
+HTML_FOOTER            = 
 
 # The HTML_STYLESHEET tag can be used to specify a user-defined cascading style
 # sheet that is used by each HTML page. It can be used to fine-tune the look of
@@ -1160,7 +1179,7 @@ HTML_FOOTER            =
 # obsolete.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_STYLESHEET        =
+HTML_STYLESHEET        = 
 
 # The HTML_EXTRA_STYLESHEET tag can be used to specify additional user-defined
 # cascading style sheets that are included after the standard style sheets
@@ -1173,7 +1192,7 @@ HTML_STYLESHEET        =
 # list). For an example see the documentation.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_EXTRA_STYLESHEET  =
+HTML_EXTRA_STYLESHEET  = 
 
 # The HTML_EXTRA_FILES tag can be used to specify one or more extra images or
 # other source files which should be copied to the HTML output directory. Note
@@ -1183,12 +1202,12 @@ HTML_EXTRA_STYLESHEET  =
 # files will be copied as-is; there are no commands or markers available.
 # This tag requires that the tag GENERATE_HTML is set to YES.
 
-HTML_EXTRA_FILES       =
+HTML_EXTRA_FILES       = 
 
 # The HTML_COLORSTYLE_HUE tag controls the color of the HTML output. Doxygen
 # will adjust the colors in the style sheet and background images according to
 # this color. Hue is specified as an angle on a colorwheel, see
-# https://en.wikipedia.org/wiki/Hue for more information. For instance the value
+# http://en.wikipedia.org/wiki/Hue for more information. For instance the value
 # 0 represents red, 60 is yellow, 120 is green, 180 is cyan, 240 is blue, 300
 # purple, and 360 is red again.
 # Minimum value: 0, maximum value: 359, default value: 220.
@@ -1224,17 +1243,6 @@ HTML_COLORSTYLE_GAMMA  = 80
 
 HTML_TIMESTAMP         = NO
 
-# If the HTML_DYNAMIC_MENUS tag is set to YES then the generated HTML
-# documentation will contain a main index with vertical navigation menus that
-# are dynamically created via Javascript. If disabled, the navigation index will
-# consists of multiple levels of tabs that are statically embedded in every HTML
-# page. Disable this option to support browsers that do not have Javascript,
-# like the Qt help browser.
-# The default value is: YES.
-# This tag requires that the tag GENERATE_HTML is set to YES.
-
-HTML_DYNAMIC_MENUS     = YES
-
 # If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
 # documentation will contain sections that can be hidden and shown after the
 # page has loaded.
@@ -1258,12 +1266,12 @@ HTML_INDEX_NUM_ENTRIES = 100
 
 # If the GENERATE_DOCSET tag is set to YES, additional index files will be
 # generated that can be used as input for Apple's Xcode 3 integrated development
-# environment (see: https://developer.apple.com/tools/xcode/), introduced with
+# environment (see: http://developer.apple.com/tools/xcode/), introduced with
 # OSX 10.5 (Leopard). To create a documentation set, doxygen will generate a
 # Makefile in the HTML output directory. Running make will produce the docset in
 # that directory and running make install will install the docset in
 # ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find it at
-# startup. See https://developer.apple.com/tools/creatingdocsetswithdoxygen.html
+# startup. See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
 # for more information.
 # The default value is: NO.
 # This tag requires that the tag GENERATE_HTML is set to YES.
@@ -1323,7 +1331,7 @@ GENERATE_HTMLHELP      = NO
 # written to the html output directory.
 # This tag requires that the tag GENERATE_HTMLHELP is set to YES.
 
-CHM_FILE               =
+CHM_FILE               = 
 
 # The HHC_LOCATION tag can be used to specify the location (absolute path
 # including file name) of the HTML help compiler (hhc.exe). If non-empty,
@@ -1331,7 +1339,7 @@ CHM_FILE               =
 # The file has to be specified with full path.
 # This tag requires that the tag GENERATE_HTMLHELP is set to YES.
 
-HHC_LOCATION           =
+HHC_LOCATION           = 
 
 # The GENERATE_CHI flag controls if a separate .chi index file is generated
 # (YES) or that it should be included in the master .chm file (NO).
@@ -1344,7 +1352,7 @@ GENERATE_CHI           = NO
 # and project file content.
 # This tag requires that the tag GENERATE_HTMLHELP is set to YES.
 
-CHM_INDEX_ENCODING     =
+CHM_INDEX_ENCODING     = 
 
 # The BINARY_TOC flag controls whether a binary table of contents is generated
 # (YES) or a normal table of contents (NO) in the .chm file. Furthermore it
@@ -1375,11 +1383,11 @@ GENERATE_QHP           = NO
 # the HTML output folder.
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
-QCH_FILE               =
+QCH_FILE               = 
 
 # The QHP_NAMESPACE tag specifies the namespace to use when generating Qt Help
 # Project output. For more information please see Qt Help Project / Namespace
-# (see: http://doc.qt.io/qt-4.8/qthelpproject.html#namespace).
+# (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#namespace).
 # The default value is: org.doxygen.Project.
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
@@ -1387,7 +1395,8 @@ QHP_NAMESPACE          = org.doxygen.Project
 
 # The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating Qt
 # Help Project output. For more information please see Qt Help Project / Virtual
-# Folders (see: http://doc.qt.io/qt-4.8/qthelpproject.html#virtual-folders).
+# Folders (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#virtual-
+# folders).
 # The default value is: doc.
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
@@ -1395,31 +1404,33 @@ QHP_VIRTUAL_FOLDER     = doc
 
 # If the QHP_CUST_FILTER_NAME tag is set, it specifies the name of a custom
 # filter to add. For more information please see Qt Help Project / Custom
-# Filters (see: http://doc.qt.io/qt-4.8/qthelpproject.html#custom-filters).
+# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
+# filters).
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
-QHP_CUST_FILTER_NAME   =
+QHP_CUST_FILTER_NAME   = 
 
 # The QHP_CUST_FILTER_ATTRS tag specifies the list of the attributes of the
 # custom filter to add. For more information please see Qt Help Project / Custom
-# Filters (see: http://doc.qt.io/qt-4.8/qthelpproject.html#custom-filters).
+# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
+# filters).
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
-QHP_CUST_FILTER_ATTRS  =
+QHP_CUST_FILTER_ATTRS  = 
 
 # The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this
 # project's filter section matches. Qt Help Project / Filter Attributes (see:
-# http://doc.qt.io/qt-4.8/qthelpproject.html#filter-attributes).
+# http://qt-project.org/doc/qt-4.8/qthelpproject.html#filter-attributes).
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
-QHP_SECT_FILTER_ATTRS  =
+QHP_SECT_FILTER_ATTRS  = 
 
 # The QHG_LOCATION tag can be used to specify the location of Qt's
 # qhelpgenerator. If non-empty doxygen will try to run qhelpgenerator on the
 # generated .qhp file.
 # This tag requires that the tag GENERATE_QHP is set to YES.
 
-QHG_LOCATION           =
+QHG_LOCATION           = 
 
 # If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files will be
 # generated, together with the HTML files, they form an Eclipse help plugin. To
@@ -1502,7 +1513,7 @@ EXT_LINKS_IN_WINDOW    = NO
 
 FORMULA_FONTSIZE       = 10
 
-# Use the FORMULA_TRANSPARENT tag to determine whether or not the images
+# Use the FORMULA_TRANPARENT tag to determine whether or not the images
 # generated for formulas are transparent PNGs. Transparent PNGs are not
 # supported properly for IE 6.0, but are supported on all modern browsers.
 #
@@ -1514,7 +1525,7 @@ FORMULA_FONTSIZE       = 10
 FORMULA_TRANSPARENT    = YES
 
 # Enable the USE_MATHJAX option to render LaTeX formulas using MathJax (see
-# https://www.mathjax.org) which uses client side Javascript for the rendering
+# http://www.mathjax.org) which uses client side Javascript for the rendering
 # instead of using pre-rendered bitmaps. Use this if you do not have LaTeX
 # installed or if you want to formulas look prettier in the HTML output. When
 # enabled you may also need to install MathJax separately and configure the path
@@ -1541,18 +1552,18 @@ MATHJAX_FORMAT         = HTML-CSS
 # MATHJAX_RELPATH should be ../mathjax. The default value points to the MathJax
 # Content Delivery Network so you can quickly see the result without installing
 # MathJax. However, it is strongly recommended to install a local copy of
-# MathJax from https://www.mathjax.org before deployment.
-# The default value is: https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.2/.
+# MathJax from http://www.mathjax.org before deployment.
+# The default value is: http://cdn.mathjax.org/mathjax/latest.
 # This tag requires that the tag USE_MATHJAX is set to YES.
 
-MATHJAX_RELPATH        = https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.2/
+MATHJAX_RELPATH        = http://cdn.mathjax.org/mathjax/latest
 
 # The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax
 # extension names that should be enabled during MathJax rendering. For example
 # MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols
 # This tag requires that the tag USE_MATHJAX is set to YES.
 
-MATHJAX_EXTENSIONS     =
+MATHJAX_EXTENSIONS     = 
 
 # The MATHJAX_CODEFILE tag can be used to specify a file with javascript pieces
 # of code that will be used on startup of the MathJax code. See the MathJax site
@@ -1560,7 +1571,7 @@ MATHJAX_EXTENSIONS     =
 # example see the documentation.
 # This tag requires that the tag USE_MATHJAX is set to YES.
 
-MATHJAX_CODEFILE       =
+MATHJAX_CODEFILE       = 
 
 # When the SEARCHENGINE tag is enabled doxygen will generate a search box for
 # the HTML output. The underlying search engine uses javascript and DHTML and
@@ -1603,7 +1614,7 @@ SERVER_BASED_SEARCH    = NO
 #
 # Doxygen ships with an example indexer (doxyindexer) and search engine
 # (doxysearch.cgi) which are based on the open source search engine library
-# Xapian (see: https://xapian.org/).
+# Xapian (see: http://xapian.org/).
 #
 # See the section "External Indexing and Searching" for details.
 # The default value is: NO.
@@ -1616,11 +1627,11 @@ EXTERNAL_SEARCH        = NO
 #
 # Doxygen ships with an example indexer (doxyindexer) and search engine
 # (doxysearch.cgi) which are based on the open source search engine library
-# Xapian (see: https://xapian.org/). See the section "External Indexing and
+# Xapian (see: http://xapian.org/). See the section "External Indexing and
 # Searching" for details.
 # This tag requires that the tag SEARCHENGINE is set to YES.
 
-SEARCHENGINE_URL       =
+SEARCHENGINE_URL       = 
 
 # When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the unindexed
 # search data is written to a file for indexing by an external tool. With the
@@ -1636,7 +1647,7 @@ SEARCHDATA_FILE        = searchdata.xml
 # projects and redirect the results back to the right project.
 # This tag requires that the tag SEARCHENGINE is set to YES.
 
-EXTERNAL_SEARCH_ID     =
+EXTERNAL_SEARCH_ID     = 
 
 # The EXTRA_SEARCH_MAPPINGS tag can be used to enable searching through doxygen
 # projects other than the one defined by this configuration file, but that are
@@ -1646,7 +1657,7 @@ EXTERNAL_SEARCH_ID     =
 # EXTRA_SEARCH_MAPPINGS = tagname1=loc1 tagname2=loc2 ...
 # This tag requires that the tag SEARCHENGINE is set to YES.
 
-EXTRA_SEARCH_MAPPINGS  =
+EXTRA_SEARCH_MAPPINGS  = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to the LaTeX output
@@ -1710,7 +1721,7 @@ PAPER_TYPE             = a4
 # If left blank no extra packages will be included.
 # This tag requires that the tag GENERATE_LATEX is set to YES.
 
-EXTRA_PACKAGES         =
+EXTRA_PACKAGES         = 
 
 # The LATEX_HEADER tag can be used to specify a personal LaTeX header for the
 # generated LaTeX document. The header should contain everything until the first
@@ -1726,7 +1737,7 @@ EXTRA_PACKAGES         =
 # to HTML_HEADER.
 # This tag requires that the tag GENERATE_LATEX is set to YES.
 
-LATEX_HEADER           =
+LATEX_HEADER           = 
 
 # The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for the
 # generated LaTeX document. The footer should contain everything after the last
@@ -1737,7 +1748,7 @@ LATEX_HEADER           =
 # Note: Only use a user-defined footer if you know what you are doing!
 # This tag requires that the tag GENERATE_LATEX is set to YES.
 
-LATEX_FOOTER           =
+LATEX_FOOTER           = 
 
 # The LATEX_EXTRA_STYLESHEET tag can be used to specify additional user-defined
 # LaTeX style sheets that are included after the standard style sheets created
@@ -1748,7 +1759,7 @@ LATEX_FOOTER           =
 # list).
 # This tag requires that the tag GENERATE_LATEX is set to YES.
 
-LATEX_EXTRA_STYLESHEET =
+LATEX_EXTRA_STYLESHEET = 
 
 # The LATEX_EXTRA_FILES tag can be used to specify one or more extra images or
 # other source files which should be copied to the LATEX_OUTPUT output
@@ -1756,7 +1767,7 @@ LATEX_EXTRA_STYLESHEET =
 # markers available.
 # This tag requires that the tag GENERATE_LATEX is set to YES.
 
-LATEX_EXTRA_FILES      =
+LATEX_EXTRA_FILES      = 
 
 # If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated is
 # prepared for conversion to PDF (using ps2pdf or pdflatex). The PDF file will
@@ -1803,7 +1814,7 @@ LATEX_SOURCE_CODE      = NO
 
 # The LATEX_BIB_STYLE tag can be used to specify the style to use for the
 # bibliography, e.g. plainnat, or ieeetr. See
-# https://en.wikipedia.org/wiki/BibTeX and \cite for more info.
+# http://en.wikipedia.org/wiki/BibTeX and \cite for more info.
 # The default value is: plain.
 # This tag requires that the tag GENERATE_LATEX is set to YES.
 
@@ -1864,14 +1875,14 @@ RTF_HYPERLINKS         = NO
 # default style sheet that doxygen normally uses.
 # This tag requires that the tag GENERATE_RTF is set to YES.
 
-RTF_STYLESHEET_FILE    =
+RTF_STYLESHEET_FILE    = 
 
 # Set optional variables used in the generation of an RTF document. Syntax is
 # similar to doxygen's config file. A template extensions file can be generated
 # using doxygen -e rtf extensionFile.
 # This tag requires that the tag GENERATE_RTF is set to YES.
 
-RTF_EXTENSIONS_FILE    =
+RTF_EXTENSIONS_FILE    = 
 
 # If the RTF_SOURCE_CODE tag is set to YES then doxygen will include source code
 # with syntax highlighting in the RTF output.
@@ -1916,7 +1927,7 @@ MAN_EXTENSION          = .3
 # MAN_EXTENSION with the initial . removed.
 # This tag requires that the tag GENERATE_MAN is set to YES.
 
-MAN_SUBDIR             =
+MAN_SUBDIR             = 
 
 # If the MAN_LINKS tag is set to YES and doxygen generates man output, then it
 # will generate one additional man file for each entity documented in the real
@@ -1986,9 +1997,9 @@ DOCBOOK_PROGRAMLISTING = NO
 #---------------------------------------------------------------------------
 
 # If the GENERATE_AUTOGEN_DEF tag is set to YES, doxygen will generate an
-# AutoGen Definitions (see http://autogen.sourceforge.net/) file that captures
-# the structure of the code including all documentation. Note that this feature
-# is still experimental and incomplete at the moment.
+# AutoGen Definitions (see http://autogen.sf.net) file that captures the
+# structure of the code including all documentation. Note that this feature is
+# still experimental and incomplete at the moment.
 # The default value is: NO.
 
 GENERATE_AUTOGEN_DEF   = NO
@@ -2029,7 +2040,7 @@ PERLMOD_PRETTY         = YES
 # overwrite each other's variables.
 # This tag requires that the tag GENERATE_PERLMOD is set to YES.
 
-PERLMOD_MAKEVAR_PREFIX =
+PERLMOD_MAKEVAR_PREFIX = 
 
 #---------------------------------------------------------------------------
 # Configuration options related to the preprocessor
@@ -2070,7 +2081,7 @@ SEARCH_INCLUDES        = YES
 # preprocessor.
 # This tag requires that the tag SEARCH_INCLUDES is set to YES.
 
-INCLUDE_PATH           =
+INCLUDE_PATH           = 
 
 # You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
 # patterns (like *.h and *.hpp) to filter out the header-files in the
@@ -2078,7 +2089,7 @@ INCLUDE_PATH           =
 # used.
 # This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
 
-INCLUDE_FILE_PATTERNS  =
+INCLUDE_FILE_PATTERNS  = 
 
 # The PREDEFINED tag can be used to specify one or more macro names that are
 # defined before the preprocessor is started (similar to the -D option of e.g.
@@ -2088,7 +2099,7 @@ INCLUDE_FILE_PATTERNS  =
 # recursively expanded use the := operator instead of the = operator.
 # This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
 
-PREDEFINED             =
+PREDEFINED             = 
 
 # If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this
 # tag can be used to specify a list of macro names that should be expanded. The
@@ -2097,7 +2108,7 @@ PREDEFINED             =
 # definition found in the source code.
 # This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
 
-EXPAND_AS_DEFINED      =
+EXPAND_AS_DEFINED      = 
 
 # If the SKIP_FUNCTION_MACROS tag is set to YES then doxygen's preprocessor will
 # remove all references to function-like macros that are alone on a line, have
@@ -2126,13 +2137,13 @@ SKIP_FUNCTION_MACROS   = YES
 # the path). If a tag file is not located in the directory in which doxygen is
 # run, you must also specify the path to the tagfile here.
 
-TAGFILES               =
+TAGFILES               = 
 
 # When a file name is specified after GENERATE_TAGFILE, doxygen will create a
 # tag file that is based on the input files it reads. See section "Linking to
 # external documentation" for more information about the usage of tag files.
 
-GENERATE_TAGFILE       =
+GENERATE_TAGFILE       = 
 
 # If the ALLEXTERNALS tag is set to YES, all external class will be listed in
 # the class index. If set to NO, only the inherited external classes will be
@@ -2172,7 +2183,7 @@ PERL_PATH              = /usr/bin/perl
 # powerful graphs.
 # The default value is: YES.
 
-CLASS_DIAGRAMS         = YES
+CLASS_DIAGRAMS         = NO
 
 # You can define message sequence charts within doxygen comments using the \msc
 # command. Doxygen will then run the mscgen tool (see:
@@ -2181,14 +2192,14 @@ CLASS_DIAGRAMS         = YES
 # the mscgen tool resides. If left empty the tool is assumed to be found in the
 # default search path.
 
-MSCGEN_PATH            =
+MSCGEN_PATH            = 
 
 # You can include diagrams made with dia in doxygen documentation. Doxygen will
 # then run dia to produce the diagram and insert it in the documentation. The
 # DIA_PATH tag allows you to specify the directory where the dia binary resides.
 # If left empty dia is assumed to be found in the default search path.
 
-DIA_PATH               =
+DIA_PATH               = 
 
 # If set to YES the inheritance and collaboration graphs will hide inheritance
 # and usage relations if the target is undocumented or is not a class.
@@ -2201,9 +2212,9 @@ HIDE_UNDOC_RELATIONS   = YES
 # http://www.graphviz.org/), a graph visualization toolkit from AT&T and Lucent
 # Bell Labs. The other options in this section have no effect if this option is
 # set to NO
-# The default value is: NO.
+# The default value is: YES.
 
-HAVE_DOT               = NO
+HAVE_DOT               = YES
 
 # The DOT_NUM_THREADS specifies the number of dot invocations doxygen is allowed
 # to run in parallel. When set to 0 doxygen will base this on the number of
@@ -2237,7 +2248,7 @@ DOT_FONTSIZE           = 10
 # the path where dot can find it using this tag.
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-DOT_FONTPATH           =
+DOT_FONTPATH           = 
 
 # If the CLASS_GRAPH tag is set to YES then doxygen will generate a graph for
 # each documented class showing the direct and indirect inheritance relations.
@@ -2320,7 +2331,7 @@ INCLUDED_BY_GRAPH      = YES
 # The default value is: NO.
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-CALL_GRAPH             = NO
+CALL_GRAPH             = YES
 
 # If the CALLER_GRAPH tag is set to YES then doxygen will generate a caller
 # dependency graph for every global function or class method.
@@ -2332,7 +2343,7 @@ CALL_GRAPH             = NO
 # The default value is: NO.
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-CALLER_GRAPH           = NO
+CALLER_GRAPH           = YES
 
 # If the GRAPHICAL_HIERARCHY tag is set to YES then doxygen will graphical
 # hierarchy of all classes instead of a textual one.
@@ -2357,7 +2368,9 @@ DIRECTORY_GRAPH        = YES
 # Note: If you choose svg you need to set HTML_FILE_EXTENSION to xhtml in order
 # to make the SVG files visible in IE 9+ (other browsers do not have this
 # requirement).
-# Possible values are: png, jpg, gif, svg, png:gd, png:gd:gd, png:cairo,
+# Possible values are: png, png:cairo, png:cairo:cairo, png:cairo:gd, png:gd,
+# png:gd:gd, jpg, jpg:cairo, jpg:cairo:gd, jpg:gd, jpg:gd:gd, gif, gif:cairo,
+# gif:cairo:gd, gif:gd, gif:gd:gd, svg, png:gd, png:gd:gd, png:cairo,
 # png:cairo:gd, png:cairo:cairo, png:cairo:gdiplus, png:gdiplus and
 # png:gdiplus:gdiplus.
 # The default value is: png.
@@ -2375,32 +2388,32 @@ DOT_IMAGE_FORMAT       = png
 # The default value is: NO.
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-INTERACTIVE_SVG        = YES
+INTERACTIVE_SVG        = NO
 
 # The DOT_PATH tag can be used to specify the path where the dot tool can be
 # found. If left blank, it is assumed the dot tool can be found in the path.
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-DOT_PATH               =
+DOT_PATH               = 
 
 # The DOTFILE_DIRS tag can be used to specify one or more directories that
 # contain dot files that are included in the documentation (see the \dotfile
 # command).
 # This tag requires that the tag HAVE_DOT is set to YES.
 
-DOTFILE_DIRS           =
+DOTFILE_DIRS           = 
 
 # The MSCFILE_DIRS tag can be used to specify one or more directories that
 # contain msc files that are included in the documentation (see the \mscfile
 # command).
 
-MSCFILE_DIRS           =
+MSCFILE_DIRS           = 
 
 # The DIAFILE_DIRS tag can be used to specify one or more directories that
 # contain dia files that are included in the documentation (see the \diafile
 # command).
 
-DIAFILE_DIRS           =
+DIAFILE_DIRS           = 
 
 # When using plantuml, the PLANTUML_JAR_PATH tag should be used to specify the
 # path where java can find the plantuml.jar file. If left blank, it is assumed
@@ -2408,17 +2421,17 @@ DIAFILE_DIRS           =
 # generate a warning when it encounters a \startuml command in this case and
 # will not generate output for the diagram.
 
-PLANTUML_JAR_PATH      =
+PLANTUML_JAR_PATH      = 
 
 # When using plantuml, the PLANTUML_CFG_FILE tag can be used to specify a
 # configuration file for plantuml.
 
-PLANTUML_CFG_FILE      =
+PLANTUML_CFG_FILE      = 
 
 # When using plantuml, the specified paths are searched for files specified by
 # the !include statement in a plantuml block.
 
-PLANTUML_INCLUDE_PATH  =
+PLANTUML_INCLUDE_PATH  = 
 
 # The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of nodes
 # that will be shown in the graph. If the number of nodes in a graph becomes