From 00226a1aa614bae4133b1d251682372a46e54226 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?David=20Hrb=C3=A1=C4=8D?= <david@hrbac.cz>
Date: Fri, 2 Nov 2018 08:09:57 +0100
Subject: [PATCH] Links OK
---
docs.it4i/software/chemistry/{INCAR => INCAR.txt} | 0
docs.it4i/software/chemistry/{KPOINTS => KPOINTS.txt} | 0
docs.it4i/software/chemistry/{POSCAR => POSCAR.txt} | 0
docs.it4i/software/chemistry/{POTCAR => POTCAR.txt} | 0
docs.it4i/software/chemistry/phono3py.md | 8 ++++----
docs.it4i/software/debuggers/scalasca.md | 2 +-
docs.it4i/software/debuggers/score-p.md | 2 +-
docs.it4i/software/intel/intel-suite/intel-advisor.md | 2 +-
8 files changed, 7 insertions(+), 7 deletions(-)
rename docs.it4i/software/chemistry/{INCAR => INCAR.txt} (100%)
rename docs.it4i/software/chemistry/{KPOINTS => KPOINTS.txt} (100%)
rename docs.it4i/software/chemistry/{POSCAR => POSCAR.txt} (100%)
rename docs.it4i/software/chemistry/{POTCAR => POTCAR.txt} (100%)
diff --git a/docs.it4i/software/chemistry/INCAR b/docs.it4i/software/chemistry/INCAR.txt
similarity index 100%
rename from docs.it4i/software/chemistry/INCAR
rename to docs.it4i/software/chemistry/INCAR.txt
diff --git a/docs.it4i/software/chemistry/KPOINTS b/docs.it4i/software/chemistry/KPOINTS.txt
similarity index 100%
rename from docs.it4i/software/chemistry/KPOINTS
rename to docs.it4i/software/chemistry/KPOINTS.txt
diff --git a/docs.it4i/software/chemistry/POSCAR b/docs.it4i/software/chemistry/POSCAR.txt
similarity index 100%
rename from docs.it4i/software/chemistry/POSCAR
rename to docs.it4i/software/chemistry/POSCAR.txt
diff --git a/docs.it4i/software/chemistry/POTCAR b/docs.it4i/software/chemistry/POTCAR.txt
similarity index 100%
rename from docs.it4i/software/chemistry/POTCAR
rename to docs.it4i/software/chemistry/POTCAR.txt
diff --git a/docs.it4i/software/chemistry/phono3py.md b/docs.it4i/software/chemistry/phono3py.md
index 560760eea..1444ae916 100644
--- a/docs.it4i/software/chemistry/phono3py.md
+++ b/docs.it4i/software/chemistry/phono3py.md
@@ -166,10 +166,10 @@ Finally the thermal conductivity result is produced by grouping single conductiv
```console
$ phono3py --fc3 --fc2 --dim="2 2 2" --mesh="9 9 9" --br --read_gamma
```
-[1]: POSCAR
-[2]: KPOINTS
-[3]: POTCAR
-[4]: INCAR
+[1]: ./POSCAR.txt
+[2]: ./KPOINTS.txt
+[3]: ./POTCAR.txt
+[4]: ./INCAR.txt
[5]: prepare.sh
[6]: run.sh
[7]: submit.sh
diff --git a/docs.it4i/software/debuggers/scalasca.md b/docs.it4i/software/debuggers/scalasca.md
index c2b0141bc..b2ad3dd09 100644
--- a/docs.it4i/software/debuggers/scalasca.md
+++ b/docs.it4i/software/debuggers/scalasca.md
@@ -69,7 +69,7 @@ Refer to [CUBE documentation][7] on usage of the GUI viewer.
1. [http://www.scalasca.org/][a]
-[1]: ../../modules-matrix.mdl
+[1]: ../../modules-matrix.md
[2]: ../compilers.md
[3]: ../mpi/running_openmpi.md
[4]: ../mpi/running-mpich2.md
diff --git a/docs.it4i/software/debuggers/score-p.md b/docs.it4i/software/debuggers/score-p.md
index 6315249f4..4c98d7a11 100644
--- a/docs.it4i/software/debuggers/score-p.md
+++ b/docs.it4i/software/debuggers/score-p.md
@@ -124,4 +124,4 @@ The directives are ignored if the program is compiled without Score-P. Again, re
[a]: http://www.vi-hps.org/projects/score-p/
[b]: https://silc.zih.tu-dresden.de/scorep-current/pdf/scorep.pdf
-[c]: (ttps://silc.zih.tu-dresden.de/scorep-current/pdf/scorep.pdf
+[c]: https://silc.zih.tu-dresden.de/scorep-current/pdf/scorep.pdf
diff --git a/docs.it4i/software/intel/intel-suite/intel-advisor.md b/docs.it4i/software/intel/intel-suite/intel-advisor.md
index f2602054a..d03a5efa9 100644
--- a/docs.it4i/software/intel/intel-suite/intel-advisor.md
+++ b/docs.it4i/software/intel/intel-suite/intel-advisor.md
@@ -32,4 +32,4 @@ In the left pane, you can switch between Vectorization and Threading workflows.
[a]: https://software.intel.com/en-us/intel-advisor-tutorial-vectorization-windows-cplusplus
[b]: https://software.intel.com/en-us/intel-advisor-xe
-[c]: (https://software.intel.com/en-us/intel-advisor-2016-user-guide-linux
+[c]: https://software.intel.com/en-us/intel-advisor-2016-user-guide-linux
--
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