From 035c98f8fae824a7a7e746638b529b8e8454f681 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?David=20Hrb=C3=A1=C4=8D?= <david@hrbac.cz>
Date: Fri, 20 Jan 2017 11:00:15 +0100
Subject: [PATCH] Script to create list of modulea for the clusters
---
cluster_modules.py | 43 +++++++++++++++++++++++++++++++++++++++++++
get_cvs.sh | 4 ++++
2 files changed, 47 insertions(+)
create mode 100755 cluster_modules.py
create mode 100755 get_cvs.sh
diff --git a/cluster_modules.py b/cluster_modules.py
new file mode 100755
index 000000000..dfa6400a5
--- /dev/null
+++ b/cluster_modules.py
@@ -0,0 +1,43 @@
+#!/usr/bin/python
+import csv
+
+def get_data(filename):
+ '''function to read the data form the input csv file to use in the analysis'''
+ reader = [] # Just in case the file open fails
+ with open(filename, 'rb') as f:
+ reader = csv.reader(f,delimiter=',')
+ #returns all the data from the csv file in list form
+ #f.close() # May need to close the file when done
+ return list(reader) # only return the reader when you have finished.
+
+your_list = []
+your_list += get_data('modules-anselm.csv')
+your_list += get_data('modules-salomon.csv')
+#print your_list
+
+a=[["python/2.8.1",1],["python/2.9.1",2],["python/2.8.1",4],["python/3.0.1",4]]
+counts = dict()
+for i in your_list:
+ #print i[0]
+ #print int(i[1])
+ counts[i[0]]=counts.get(i[0], 0) + int(i[1])
+
+#print counts
+
+c=[
+"---",
+"--A",
+"-S-",
+"-SA",
+"U--",
+"U-A",
+"US-",
+"USA",
+]
+
+print "| Module | Clusters |"
+print "| ------ | -------- |"
+
+for m,i in counts.iteritems():
+ print "| %s | %s |" % (m,c[i])
+
diff --git a/get_cvs.sh b/get_cvs.sh
new file mode 100755
index 000000000..d6881b68e
--- /dev/null
+++ b/get_cvs.sh
@@ -0,0 +1,4 @@
+#!/bin/bash
+curl -s https://code.it4i.cz/hrb33/modules-anselm/raw/master/anselm.csv -o modules-anselm.csv
+curl -s https://code.it4i.cz/hrb33/modules-salomon/raw/master/salomon.csv -o modules-salomon.csv
+#curl -s https://code.it4i.cz/hrb33/modules-salomon/raw/master/salomon-uv.csv -o modules-salomon-uv.csv
--
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