From 0d204ad79ab85b40581f93f7dfec5cfff519dc83 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Pavel=20Jir=C3=A1sek?= <pavel.jirasek@vsb.cz> Date: Tue, 31 Jan 2017 09:52:06 +0100 Subject: [PATCH] Fix PBSsaved to #example-jobscript-for-mpi-calculation-with-preloaded-inputs --- docs.it4i/anselm/job-submission-and-execution.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/docs.it4i/anselm/job-submission-and-execution.md b/docs.it4i/anselm/job-submission-and-execution.md index 1c530e3e9..b0ea19bd1 100644 --- a/docs.it4i/anselm/job-submission-and-execution.md +++ b/docs.it4i/anselm/job-submission-and-execution.md @@ -48,7 +48,7 @@ $ qsub -A OPEN-0-0 -q qfree -l select=10:ncpus=16 ./myjob In this example, we allocate 10 nodes, 16 cores per node, for 12 hours. We allocate these resources via the qfree queue. It is not required that the project OPEN-0-0 has any available resources left. Consumed resources are still accounted for. Jobscript myjob will be executed on the first node in the allocation. -All qsub options may be [saved directly into the jobscript](job-submission-and-execution/#PBSsaved). In such a case, no options to qsub are needed. +All qsub options may be [saved directly into the jobscript](#example-jobscript-for-mpi-calculation-with-preloaded-inputs). In such a case, no options to qsub are needed. ```bash $ qsub ./myjob @@ -345,6 +345,8 @@ In some cases, it may be impractical to copy the inputs to scratch and outputs t !!! note Store the qsub options within the jobscript. Use **mpiprocs** and **ompthreads** qsub options to control the MPI job execution. +### Example Jobscript for MPI Calculation With Preloaded Inputs + Example jobscript for an MPI job with preloaded inputs and executables, options for qsub are stored within the script : ```bash -- GitLab