Merge branch 'capitalize_test' into 'master'

Removed apostrophes

See merge request !169

docs.it4i/software/debuggers/Introduction.md

-# Debuggers and profilers summary
+# Debuggers and Profilers Summary
 
 ## Introduction
 

docs.it4i/software/intel/intel-xeon-phi.md

@@ -413,7 +413,7 @@ Done
 !!! note ""
     Behavioral of automatic offload mode is controlled by functions called within the program or by environmental variables. Complete list of controls is listed [here](http://software.intel.com/sites/products/documentation/doclib/mkl_sa/11/mkl_userguide_lnx/GUID-3DC4FC7D-A1E4-423D-9C0C-06AB265FFA86.htm).
 
-### Automatic offload example #2
+### Automatic Offload Example #2
 
 In this example, we will demonstrate automatic offload control via an environment vatiable MKL_MIC_ENABLE. The function DGEMM will be offloaded.
 
@@ -922,7 +922,7 @@ $ mpirun -genv LD_LIBRARY_PATH $MIC_LD_LIBRARY_PATH \
 : -host r25u26n711 -n 6 ~/mpi-test
 ```
 
-### Symmetric model
+### Symmetric Model
 
 In a symmetric mode MPI programs are executed on both host computer(s) and MIC accelerator(s). Since MIC has a different
 architecture and requires different binary file produced by the Intel compiler two different files has to be compiled before MPI program is executed.

docs.it4i/software/lang/conda.md

@@ -85,7 +85,7 @@ $ source activate anaconda2
 
 The default is Python 3.6
 
-### First usage Module Anaconda3
+### First Usage Module Anaconda3
 
 ```console
 $ ml Anaconda3/4.4.0

docs.it4i/software/lang/java.md

@@ -24,7 +24,7 @@ $ which javac
 
 Java applications may use MPI for inter-process communication, in conjunction with Open MPI. Read more on <http://www.open-mpi.org/faq/?category=java>. This functionality is currently not supported on Anselm cluster. In case you require the java interface to MPI, please contact [cluster support](https://support.it4i.cz/rt/).
 
-## Java with OpenMPI
+## Java With OpenMPI
 
 Because there is an increasing interest in using Java for HPC. Also, MPI can benefit from Java because its widespread use makes it likely to find new uses beyond traditional HPC applications.
 

docs.it4i/software/lang/python.md

@@ -55,7 +55,7 @@ $ ml av python/2
   If you need software that is not listed, request it at support@it4i.cz.
 ```
 
-### Used Module Python/2.X
+### Used Module Python/2.x
 
 ```console
 $ python --version
@@ -65,7 +65,7 @@ $ python --version
 Python 2.7.1
 ```
 
-### Packages in Python/2.X
+### Packages in Python/2.x
 
 ```console
 $ pip list
@@ -79,7 +79,7 @@ beautifulsoup4 (4.5.3)
 ...
 ```
 
-### How to Install New Package to Python/2.X?
+### How to Install New Package to Python/2.x?
 
 ```console
 $ ml Python/2.7.13
@@ -92,7 +92,7 @@ Installing collected packages: wheel
 Successfully installed wheel-0.30.0
 ```
 
-### How to Update Package in Python/2.X?
+### How to Update Package in Python/2.x?
 
 ```console
 $ ml Python/2.7.13
@@ -124,7 +124,7 @@ $ ml av python/3
 
 ```
 
-### Used Module Python/3.X
+### Used Module Python/3.x
 
 ```console
 $ python --version
@@ -134,7 +134,7 @@ $ python --version
 Python 3.6.2
 ```
 
-### Packages in Python/3.X
+### Packages in Python/3.x
 
 ```console
 $ pip3 list
@@ -143,7 +143,7 @@ pip (8.0.2)
 setuptools (20.1.1)
 ```
 
-### How to Install New Package to Python/3.X
+### How to Install New Package to Python/3.x
 
 ```console
 $ ml Python/3.6.2-base
@@ -173,7 +173,7 @@ Installing collected packages: six, python-dateutil, pytz, numpy, pandas
 Successfully installed numpy-1.13.1 pandas-0.20.3 python-dateutil-2.6.1 pytz-2017.2 six-1.11.0
 ```
 
-### How to Update Package in Python/3.X?
+### How to Update Package in Python/3.x?
 
 ```console
 $ pip3 install scipy --upgrade --user

docs.it4i/software/machine-learning/tensorflow.md

@@ -7,7 +7,7 @@ For searching available modules type:
 $ ml av Tensorflow
 ```
 
-## Anselm modules
+## Anselm Modules
 
 Anselm provides beside others these three different TensorFlow modules:
 
@@ -25,7 +25,7 @@ Anselm provides beside others these three different TensorFlow modules:
   * CUDA/8.0.44
   * cuDNN/5.1-CUDA-8.0.44
 
-## Salomon modules
+## Salomon Modules
 
 Salomon provides beside others these three different TensorFlow modules:
 
@@ -42,7 +42,7 @@ Salomon provides beside others these three different TensorFlow modules:
   * Python/3.6.1
   * protobuf/3.2.0-GCC-7.1.0-2.28-Python-3.6.1
 
-## TensorFlow application example
+## TensorFlow Application Example
 
 After loading one of the available TensorFlow modules, you can check the functionality running the following python script.
 

docs.it4i/software/mpi/mpi4py-mpi-for-python.md

@@ -108,7 +108,7 @@ $ mpiexec -bycore -bind-to-core python hello_world.py
 
 In this example, we run MPI4Py enabled code on 4 nodes, 16 cores per node (total of 64 processes), each python process is bound to a different core. More examples and documentation can be found on [MPI for Python webpage](https://pypi.python.org/pypi/mpi4py).
 
-### Adding numbers
+### Adding Numbers
 
 Task: count sum of numbers from 1 to 1 000 000. (There is an easy formula to count the sum of arithmetic sequence, but we are showing the MPI solution with adding numbers one by one).
 

docs.it4i/software/numerical-languages/introduction.md

-# Numerical languages
+# Numerical Languages
 
 Interpreted languages for numerical computations and analysis
 

docs.it4i/software/numerical-languages/opencoarrays.md

@@ -29,7 +29,7 @@ end program hello_world
 * num_images() - returns the number of all images
 * this_image() - returns the image index - numbered from 1 to num_images()
 
-### Co-dimension Variables Declaration
+### Co-Dimension Variables Declaration
 
 Coarray variables can be declared with the **codimension[*]** attribute or by adding trailing index **[*]** after the variable name.
 Notice, the ***** character always has to be in the square brackets.

docs.it4i/software/numerical-libraries/intel-numerical-libraries.md

-# Intel numerical libraries
+# Intel Numerical Libraries
 
 Intel libraries for high performance in numerical computing
 

docs.it4i/software/tools/ansys/setting-license-preferences.md

-# Setting license preferences
+# Setting License Preferences
 
 Some ANSYS tools allow you to explicitly specify usage of academic or commercial licenses in the command line (eg. ansys161 -p aa_r to select Academic Research license). However, we have observed that not all tools obey this option and choose commercial license.
 

docs.it4i/software/tools/easybuild.md

@@ -83,7 +83,7 @@ Options:
 
 ## Build Software Using Provided EasyConfig File
 
-### Search For Available Easyconfig
+### Search for Available Easyconfig
 
 Searching for available easyconfig files can be done using the **--search** (long output) and **-S** (short output) command line options. All easyconfig files available in the robot search path are considered and searching is done case-insensitive.
 

docs.it4i/software/tools/singularity.md

@@ -29,7 +29,7 @@ Singularity.centos:latest> cat /etc/redhat-release
 CentOS Linux release 7.3.1611 (Core)
 ```
 
-## Creating Own Image from Docker Image
+## Creating Own Image From Docker Image
 
 ```console
 hrb33@hrb33-toshiba:/$ cd /tmp/

docs.it4i/software/tools/spack.md

@@ -20,7 +20,7 @@ $ ml av Spack
 !!! note
     Spack/default is rule for setting up local installation
 
-## First Usage Module Spack/default
+## First Usage Module Spack/Default
 
 The Spack will be installed into `~/Spack` folder. You can set the configuration by modifying ~/.spack/configure.yml.
 
@@ -61,7 +61,7 @@ $ spack --version
 0.10.0
 ```
 
-## Usage Module Spack/default
+## Usage Module Spack/Default
 
 ```console
 $ ml Spack
@@ -102,7 +102,7 @@ apr                       font-ibm-type1                   libmesh            op
 ...
 ```
 
-#### Specify Software Version (for package)
+#### Specify Software Version (For Package)
 
 To see more available versions of a package, run `spack versions`.
 
@@ -114,7 +114,7 @@ $ spack versions git
   Found no versions for git
 ```
 
-## Graph For Software Package
+## Graph for Software Package
 
 Spack provides `spack graph` command to display dependency graph. The command by default generates an ASCII rendering of a spec’s dependency graph.
 
@@ -317,7 +317,7 @@ $ spack load git
       source ~/.local/easybuild/software/Spack/0.10.0/share/spack/setup-env.csh
 ```
 
-### First usage
+### First Usage
 
 ```console
 $ . ~/.local/easybuild/software/Spack/0.10.0/share/spack/setup-env.sh

mkdocs.yml

@@ -58,31 +58,31 @@ pages:
     - Network: anselm/network.md
     - Remote Visualization: anselm/remote-visualization.md
     - PRACE User Support: anselm/prace.md
-  - 'Software':
-    - 'Modules':
+  - Software:
+    - Modules:
       - Lmod Environment: software/modules/lmod.md
       - Modules Matrix: modules-matrix.md
       - Available Salomon Modules: modules-salomon.md
       - Available Salomon Modules on UV: modules-salomon-uv.md
       - Available Anselm Modules: modules-anselm.md
     - ISV Licenses: software/isv_licenses.md
-    - 'Bioinformatics':
+    - Bioinformatics:
       - Bioinformatics Applications: software/bio/bioinformatics.md
-      - 'Omics Master':
+      - Omics Master:
         - Overview: software/bio/omics-master/overview.md
         - Diagnostic Component (TEAM): software/bio/omics-master/diagnostic-component-team.md
         - Priorization Component (BiERApp): software/bio/omics-master/priorization-component-bierapp.md
-    - 'CAE':
-      - 'COMSOL':
+    - CAE:
+      - COMSOL:
         - COMSOL: software/cae/comsol/comsol-multiphysics.md
         - Licensing and Available Versions: software/cae/comsol/licensing-and-available-versions.md
-    - 'Chemistry':
+    - Chemistry:
       - Molpro: software/chemistry/molpro.md
       - Orca: software/chemistry/orca.md
       - NWChem: software/chemistry/nwchem.md
       - Phono3py: software/chemistry/phono3py.md
     - Compilers: software/compilers.md
-    - 'Debuggers':
+    - Debuggers:
       - Introduction: software/debuggers/Introduction.md
       - Aislinn: software/debuggers/aislinn.md
       - Allinea Forge (DDT,MAP): software/debuggers/allinea-ddt.md
@@ -96,10 +96,10 @@ pages:
       - Total View: software/debuggers/total-view.md
       - Valgrind: software/debuggers/valgrind.md
       - Vampir: software/debuggers/vampir.md
-    - 'GPU':
+    - GPU:
       - NVIDIA CUDA: anselm/software/nvidia-cuda.md
-    - 'Intel':
-      - 'Intel Suite':
+    - Intel:
+      - Intel Suite:
         - Introduction: software/intel/intel-suite/intel-parallel-studio-introduction.md
         - Intel Advisor: software/intel/intel-suite/intel-advisor.md
         - Intel Compilers: software/intel/intel-suite/intel-compilers.md
@@ -109,18 +109,18 @@ pages:
         - Intel MKL: software/intel/intel-suite/intel-mkl.md
         - Intel TBB: software/intel/intel-suite/intel-tbb.md
         - Intel Trace Analyzer and Collector: software/intel/intel-suite/intel-trace-analyzer-and-collector.md
-      - 'Intel Xeon Phi':
+      - Intel Xeon Phi:
         - Intel Xeon Phi Salomon: software/intel/intel-xeon-phi.md
         - Intel Xeon Phi Anselm: software/intel/intel-xeon-phi.anselm.md
-    - 'Machine Learning':
+    - Machine Learning:
       - Introduction: software/machine-learning/introduction.md
       - TensorFlow: software/machine-learning/tensorflow.md
-    - 'MPI':
+    - MPI:
       - Introduction: software/mpi/mpi.md
       - MPI4Py (MPI for Python): software/mpi/mpi4py-mpi-for-python.md
       - Running Open MPI: software/mpi/Running_OpenMPI.md
       - Running MPICH2: software/mpi/running-mpich2.md
-    - 'Numerical Languages':
+    - Numerical Languages:
       - Introduction: software/numerical-languages/introduction.md
       - Clp: salomon/software/numerical-libraries/Clp.md
       - R: software/numerical-languages/r.md
@@ -128,7 +128,7 @@ pages:
       - Matlab 2013-2014: software/numerical-languages/matlab_1314.md
       - Octave: software/numerical-languages/octave.md
       - OpenCoarrays: software/numerical-languages/opencoarrays.md
-    - 'Numerical Libraries':
+    - Numerical Libraries:
       - FFTW: software/numerical-libraries/fftw.md
       - GSL: software/numerical-libraries/gsl.md
       - HDF5: software/numerical-libraries/hdf5.md
@@ -136,15 +136,15 @@ pages:
       - MAGMA for Intel Xeon Phi: software/numerical-libraries/magma-for-intel-xeon-phi.md
       - PETSc: software/numerical-libraries/petsc.md
       - Trilinos: software/numerical-libraries/trilinos.md
-    - 'Languages':
+    - Languages:
       - Java: software/lang/java.md
       - C#: software/lang/csc.md
       - Python: software/lang/python.md
       - Python-Conda: software/lang/conda.md
-    - 'Phys':
+    - Phys:
       - LMGC90: salomon/software/phys/LMGC90.md
-    - 'Tools':
-      - 'ANSYS':
+    - Tools:
+      - ANSYS:
         - Introduction: software/tools/ansys/ansys.md
         - ANSYS CFX: software/tools/ansys/ansys-cfx.md
         - ANSYS Fluent: software/tools/ansys/ansys-fluent.md
@@ -158,7 +158,7 @@ pages:
       - Singularity Container: software/tools/singularity.md
       - Spack: software/tools/spack.md
       - Virtualization: software/tools/virtualization.md
-    - 'Visualisation':
+    - Visualisation:
       - GPI-2: software/viz/gpi2.md
       - OpenFOAM: software/viz/openfoam.md
       - ParaView: software/viz/paraview.md