diff --git a/mkdocs.yml b/mkdocs.yml index a4f7371f6828c92f957778e79248da88b68e04e2..95808674ac5d1b236b8ea6ebdf1e3a3fbcbd424c 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -41,22 +41,22 @@ pages: - 'Ansys': - Introduction: anselm-cluster-documentation/software/ansys/ansys.md - ANSYS CFX: anselm-cluster-documentation/software/ansys/ansys-cfx.md + - ANSYS Fluent: anselm-cluster-documentation/software/ansys/ansys-fluent.md - ANSYS LS-DYNA: anselm-cluster-documentation/software/ansys/ansys-ls-dyna.md - ANSYS MAPDL: anselm-cluster-documentation/software/ansys/ansys-mechanical-apdl.md - LS-DYNA: anselm-cluster-documentation/software/ansys/ls-dyna.md - - ANSYS Fluent: anselm-cluster-documentation/software/ansys/ansys-fluent.md - 'Debuggers': - - Valgrind: anselm-cluster-documentation/software/debuggers/valgrind.md - - PAPI: anselm-cluster-documentation/software/debuggers/papi.md - Allinea Forge (DDT,MAP): anselm-cluster-documentation/software/debuggers/allinea-ddt.md - - Total View: anselm-cluster-documentation/software/debuggers/total-view.md + - Allinea Performance Reports: anselm-cluster-documentation/software/debuggers/allinea-performance-reports.md - CUBE: anselm-cluster-documentation/software/debuggers/cube.md + - Intel Performance Counter Monitor: anselm-cluster-documentation/software/debuggers/intel-performance-counter-monitor.md - Intel VTune Amplifier: anselm-cluster-documentation/software/debuggers/intel-vtune-amplifier.md - - VNC: anselm-cluster-documentation/software/debuggers/debuggers.md + - PAPI: anselm-cluster-documentation/software/debuggers/papi.md - Scalasca: anselm-cluster-documentation/software/debuggers/scalasca.md - Score-P: anselm-cluster-documentation/software/debuggers/score-p.md - - Intel Performance Counter Monitor: anselm-cluster-documentation/software/debuggers/intel-performance-counter-monitor.md - - Allinea Performance Reports: anselm-cluster-documentation/software/debuggers/allinea-performance-reports.md + - Total View: anselm-cluster-documentation/software/debuggers/total-view.md + - VNC: anselm-cluster-documentation/software/debuggers/debuggers.md + - Valgrind: anselm-cluster-documentation/software/debuggers/valgrind.md - Vampir: anselm-cluster-documentation/software/debuggers/vampir.md - 'Chemistry': - Molpro: anselm-cluster-documentation/software/chemistry/molpro.md @@ -66,11 +66,11 @@ pages: - GPI-2: anselm-cluster-documentation/software/gpi2.md - 'Intel Suite': - Introduction: anselm-cluster-documentation/software/intel-suite/introduction.md - - Intel MKL: anselm-cluster-documentation/software/intel-suite/intel-mkl.md - Intel Compilers: anselm-cluster-documentation/software/intel-suite/intel-compilers.md + - Intel Debugger: anselm-cluster-documentation/software/intel-suite/intel-debugger.md - Intel IPP: anselm-cluster-documentation/software/intel-suite/intel-integrated-performance-primitives.md + - Intel MKL: anselm-cluster-documentation/software/intel-suite/intel-mkl.md - Intel TBB: anselm-cluster-documentation/software/intel-suite/intel-tbb.md - - Intel Debugger: anselm-cluster-documentation/software/intel-suite/intel-debugger.md - Intel Xeon Phi: anselm-cluster-documentation/software/intel-xeon-phi.md - ISV Licenses: anselm-cluster-documentation/software/isv_licenses.md - Java: anselm-cluster-documentation/software/java.md @@ -81,18 +81,18 @@ pages: - Running MPICH2: anselm-cluster-documentation/software/mpi/running-mpich2.md - 'Numerical Languages': - Introduction: anselm-cluster-documentation/software/numerical-languages/introduction.md - - R: anselm-cluster-documentation/software/numerical-languages/r.md - Matlab 2013-2014: anselm-cluster-documentation/software/numerical-languages/matlab_1314.md - Matlab: anselm-cluster-documentation/software/numerical-languages/matlab.md - Octave: anselm-cluster-documentation/software/numerical-languages/octave.md + - R: anselm-cluster-documentation/software/numerical-languages/r.md - 'Numerical Libraries': - - Intel numerical libraries: anselm-cluster-documentation/software/numerical-libraries/intel-numerical-libraries.md - - PETSc: anselm-cluster-documentation/software/numerical-libraries/petsc.md - - Trilinos: anselm-cluster-documentation/software/numerical-libraries/trilinos.md - FFTW: anselm-cluster-documentation/software/numerical-libraries/fftw.md - GSL: anselm-cluster-documentation/software/numerical-libraries/gsl.md - - MAGMA for Intel Xeon Phi: anselm-cluster-documentation/software/numerical-libraries/magma-for-intel-xeon-phi.md - HDF5: anselm-cluster-documentation/software/numerical-libraries/hdf5.md + - Intel numerical libraries: anselm-cluster-documentation/software/numerical-libraries/intel-numerical-libraries.md + - MAGMA for Intel Xeon Phi: anselm-cluster-documentation/software/numerical-libraries/magma-for-intel-xeon-phi.md + - PETSc: anselm-cluster-documentation/software/numerical-libraries/petsc.md + - Trilinos: anselm-cluster-documentation/software/numerical-libraries/trilinos.md - nVidia CUDA: anselm-cluster-documentation/software/nvidia-cuda.md - 'Omics Master': - Diagnostic component (TEAM): anselm-cluster-documentation/software/omics-master/diagnostic-component-team.md @@ -122,40 +122,40 @@ pages: - UV Modules: modules-salomon-uv.md - 'Ansys': - Introduction: salomon/software/ansys/ansys.md - - Workbench: salomon/software/ansys/workbench.md - ANSYS CFX: salomon/software/ansys/ansys-cfx.md + - ANSYS Fluent: salomon/software/ansys/ansys-fluent.md - ANSYS LS-DYNA: salomon/software/ansys/ansys-ls-dyna.md - ANSYS MAPDL: salomon/software/ansys/ansys-mechanical-apdl.md - - ANSYS Fluent: salomon/software/ansys/ansys-fluent.md + - Workbench: salomon/software/ansys/workbench.md - Setting license preferences: salomon/software/ansys/licensing.md - Licensing and Available Versions: salomon/software/ansys/setting-license-preferences.md - 'Chemistry': - Molpro: salomon/software/chemistry/molpro.md - - Phono3py: salomon/software/chemistry/phono3py.md - NWChem: salomon/software/chemistry/nwchem.md + - Phono3py: salomon/software/chemistry/phono3py.md - Compilers: salomon/software/compilers.md - 'Comsol': - COMSOL: salomon/software/comsol/comsol-multiphysics.md - Licensing and Available Versions: salomon/software/comsol/licensing-and-available-versions.md - 'Debuggers': - Introduction: salomon/software/debuggers/Introduction.md - - Valgrind: salomon/software/debuggers/valgrind.md - - Allinea Forge (DDT,MAP): salomon/software/debuggers/allinea-ddt.md - - Total View: salomon/software/debuggers/total-view.md - - Intel VTune Amplifier XE: salomon/software/debuggers/intel-vtune-amplifier.md - Aislinn: salomon/software/debuggers/aislinn.md + - Allinea Forge (DDT,MAP): salomon/software/debuggers/allinea-ddt.md - Allinea Performance Reports: salomon/software/debuggers/allinea-performance-reports.md + - Intel VTune Amplifier XE: salomon/software/debuggers/intel-vtune-amplifier.md + - Total View: salomon/software/debuggers/total-view.md + - Valgrind: salomon/software/debuggers/valgrind.md - Vampir: salomon/software/debuggers/vampir.md - 'Intel Suite': - Introduction: salomon/software/intel-suite/intel-parallel-studio-introduction.md - - Intel MKL: salomon/software/intel-suite/intel-mkl.md + - Intel Advisor: salomon/software/intel-suite/intel-advisor.md - Intel Compilers: salomon/software/intel-suite/intel-compilers.md - - Intel IPP: salomon/software/intel-suite/intel-integrated-performance-primitives.md - - Intel TBB: salomon/software/intel-suite/intel-tbb.md - Intel Debugger: salomon/software/intel-suite/intel-debugger.md + - Intel IPP: salomon/software/intel-suite/intel-integrated-performance-primitives.md - Intel Inspector: salomon/software/intel-suite/intel-inspector.md + - Intel MKL: salomon/software/intel-suite/intel-mkl.md + - Intel TBB: salomon/software/intel-suite/intel-tbb.md - Intel Trace Analyzer and Collector: salomon/software/intel-suite/intel-trace-analyzer-and-collector.md - - Intel Advisor: salomon/software/intel-suite/intel-advisor.md - Intel Xeon Phi: salomon/software/intel-xeon-phi.md - Java: salomon/software/java.md - 'MPI': @@ -164,9 +164,9 @@ pages: - Running OpenMPI: salomon/software/mpi/Running_OpenMPI.md - 'Numerical Languages': - Introduction: salomon/software/numerical-languages/introduction.md - - R: salomon/software/numerical-languages/r.md - Matlab: salomon/software/numerical-languages/matlab.md - Octave: salomon/software/numerical-languages/octave.md + - R: salomon/software/numerical-languages/r.md - Operating System: salomon/software/operating-system.md - PBSPro Documentation: pbspro-documentation/pbspro.md - Testing: