diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 2456a8eae11b75c50ddcfffc8271ea71e8181b8e..b0556203f4c23468d3894dbb106533c057d81ab3 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -20,6 +20,7 @@ mkdocs:
- bash add_version.sh
- bash get_modules.sh
- mkdocs build
+ - bash clean_json.sh site/mkdocs/search_index.json
artifacts:
paths:
- site
diff --git a/add_version.sh b/add_version.sh
index ba0740be3d21b10b40145c676abc0511ddaa235f..075d054c3b83df6a27d6c4819f648be345442b58 100755
--- a/add_version.sh
+++ b/add_version.sh
@@ -1,3 +1,3 @@
#!/bin/bash
-VER=$(git log --pretty=format:'%h / %ai' -n 1)
-sed "s,__VERSION__,\<\/BR\>ver. $VER," mkdocs.yml -i
+VER=$(git log --pretty=format:'/ ver. %h / %ai' -n 1)
+sed "s,__VERSION__, $VER," mkdocs.yml -i
diff --git a/clean_json.sh b/clean_json.sh
new file mode 100755
index 0000000000000000000000000000000000000000..c460ef3149b8d120a41e94bb3d31cc4c46b0561f
--- /dev/null
+++ b/clean_json.sh
@@ -0,0 +1,6 @@
+#!/bin/bash
+sed 's/\\u00a0/ /g' -i "$@"
+sed 's,\\n\\n, ,g' -i "$@"
+sed 's,\\n , ,g' -i "$@"
+sed 's, \\n, ,g' -i "$@"
+sed -e 's/^[ \t]*//' -i "$@"
diff --git a/cluster_modules.py b/cluster_modules.py
new file mode 100755
index 0000000000000000000000000000000000000000..3826d9d11d678a519ace12593568fc03590252a0
--- /dev/null
+++ b/cluster_modules.py
@@ -0,0 +1,45 @@
+#!/usr/bin/python
+import csv
+import collections
+
+def get_data(filename):
+ '''function to read the data form the input csv file to use in the analysis'''
+ reader = [] # Just in case the file open fails
+ with open(filename, 'rb') as f:
+ reader = csv.reader(f,delimiter=',')
+ #returns all the data from the csv file in list form
+ #f.close() # May need to close the file when done
+ return list(reader) # only return the reader when you have finished.
+
+your_list = []
+your_list += get_data('modules-anselm.csv')
+your_list += get_data('modules-salomon.csv')
+#print your_list
+
+a=[["python/2.8.1",1],["python/2.9.1",2],["python/2.8.1",4],["python/3.0.1",4]]
+counts = dict()
+for i in your_list:
+ #print i[0]
+ #print int(i[1])
+ counts[i[0]]=counts.get(i[0], 0) + int(i[1])
+
+#print sorted(counts.items())
+
+c=[
+"---",
+"--A",
+"-S-",
+"-SA",
+"U--",
+"U-A",
+"US-",
+"USA",
+]
+
+print "| Module | Clusters |"
+print "| ------ | -------- |"
+
+
+for m,i in sorted(counts.items()):
+ print "| %s | ``%s`` |" % (m,c[i])
+
diff --git a/docs.it4i/all_modules.md b/docs.it4i/all_modules.md
new file mode 100644
index 0000000000000000000000000000000000000000..8947556dfb420a261118bc16e5a63390c979d302
--- /dev/null
+++ b/docs.it4i/all_modules.md
@@ -0,0 +1,1231 @@
+| Module | Clusters |
+| ------ | -------- |
+| 1.0.3 | ``--A`` |
+| 2.0 | ``--A`` |
+| ABINIT/7.10.1-foss-2015b | ``-S-`` |
+| ABINIT/7.10.1-intel-2015b | ``-S-`` |
+| ANSYS/16.1 | ``-S-`` |
+| ANSYS/17.0 | ``-S-`` |
+| APR-util/1.5.4 | ``-SA`` |
+| APR-util/1.5.4-foss-2015g | ``-SA`` |
+| APR/1.5.2 | ``-SA`` |
+| APR/1.5.2-foss-2015g | ``-SA`` |
+| ATLAS/3.10.1-GCC-4.9.3-2.25-LAPACK-3.4.2 | ``--A`` |
+| Adams/2013.2 | ``-S-`` |
+| Advisor/2016_update2 | ``-S-`` |
+| Advisor/2017 | ``-S-`` |
+| Amber/14 | ``-SA`` |
+| Armadillo/7.500.0-foss-2016a-Python-3.5.2 | ``-SA`` |
+| Autoconf/2.69 | ``-SA`` |
+| Autoconf/2.69-GCC-4.9.3-2.25 | ``-S-`` |
+| Autoconf/2.69-GNU-4.9.3-2.25 | ``-SA`` |
+| Autoconf/2.69-GNU-5.1.0-2.25 | ``-SA`` |
+| Autoconf/2.69-foss-2015g | ``-S-`` |
+| Autoconf/2.69-foss-2016a | ``-SA`` |
+| Autoconf/2.69-intel-2015b | ``-SA`` |
+| Autoconf/2.69-intel-2016.01 | ``-S-`` |
+| Autoconf/2.69-intel-2016a | ``-S-`` |
+| Autoconf/2.69-intel-2017.00 | ``-SA`` |
+| Automake/1.15 | ``-SA`` |
+| Automake/1.15-GCC-4.9.3-2.25 | ``-S-`` |
+| Automake/1.15-GNU-4.9.3-2.25 | ``-SA`` |
+| Automake/1.15-GNU-5.1.0-2.25 | ``-SA`` |
+| Automake/1.15-foss-2015g | ``-S-`` |
+| Automake/1.15-foss-2016a | ``-SA`` |
+| Automake/1.15-intel-2015b | ``-SA`` |
+| Automake/1.15-intel-2016.01 | ``-S-`` |
+| Automake/1.15-intel-2016a | ``-S-`` |
+| Automake/1.15-intel-2017.00 | ``-SA`` |
+| Autotools/20150215 | ``-SA`` |
+| Autotools/20150215-GCC-4.9.3-2.25 | ``-S-`` |
+| Autotools/20150215-GNU-4.9.3-2.25 | ``-SA`` |
+| Autotools/20150215-GNU-5.1.0-2.25 | ``-SA`` |
+| Autotools/20150215-foss-2016a | ``-SA`` |
+| Autotools/20150215-intel-2015b | ``-SA`` |
+| Autotools/20150215-intel-2016.01 | ``-S-`` |
+| Autotools/20150215-intel-2016a | ``-S-`` |
+| Autotools/20150215-intel-2017.00 | ``-SA`` |
+| BCFtools/1.3-foss-2015g | ``-S-`` |
+| BWA/0.7.5a-foss-2015g | ``-S-`` |
+| Bash/4.2-intel-2015b | ``-S-`` |
+| Bash/4.3 | ``-SA`` |
+| BerkeleyUPC/2.16.2-gompi-2015b | ``-S-`` |
+| Bison/3.0.4-GCC-4.9.3 | ``--A`` |
+| Bison/3.0.4-intel-2015b | ``--A`` |
+| Boost/1.58.0-Python-2.7.9 | ``-S-`` |
+| Boost/1.58.0-foss-2015g-Python-2.7.9 | ``-SA`` |
+| Boost/1.58.0-gompi-2015e-Python-2.7.9 | ``-S-`` |
+| Boost/1.58.0-ictce-7.3.5-Python-2.7.9 | ``-S-`` |
+| Boost/1.58.0-intel-2015b-Python-2.7.9 | ``-S-`` |
+| Boost/1.58.0-intel-2016.01-Python-2.7.9 | ``-S-`` |
+| Boost/1.59.0-intel-2015b | ``--A`` |
+| Boost/1.59.0-intel-2015b-Python-2.7.11 | ``-S-`` |
+| Boost/1.59.0-intel-2016.01 | ``-S-`` |
+| Boost/1.60.0-foss-2015g-Python-2.7.9 | ``-SA`` |
+| Boost/1.60.0-intel-2015b-Python-2.7.11 | ``-S-`` |
+| Boost/1.60.0-intel-2016a | ``--A`` |
+| Boost/1.61.0-foss-2016a | ``-S-`` |
+| Boost/1.61.0-foss-2016a-serial | ``-SA`` |
+| CMake/3.0.0-foss-2015g | ``-S-`` |
+| CMake/3.0.0-ictce-7.3.5 | ``-S-`` |
+| CMake/3.0.0-intel-2015b | ``-S-`` |
+| CMake/3.0.0-intel-2016.01 | ``-S-`` |
+| CMake/3.3.1-GCC-4.9.3-2.25 | ``--A`` |
+| CMake/3.3.1-GCC-5.3.0-2.25 | ``-S-`` |
+| CMake/3.3.1-GCC-5.3.1-snapshot-20160419-2.25 | ``-S-`` |
+| CMake/3.3.1-GNU-4.9.3-2.25 | ``-S-`` |
+| CMake/3.3.1-GNU-5.1.0-2.25 | ``-S-`` |
+| CMake/3.3.1-foss-2015g | ``-SA`` |
+| CMake/3.3.1-foss-2016a | ``--A`` |
+| CMake/3.3.1-intel-2016.01 | ``-S-`` |
+| CMake/3.3.2-GNU-4.9.3-2.25 | ``-S-`` |
+| CMake/3.3.2-intel-2016.01 | ``-S-`` |
+| CMake/3.4.1-GCCcore-4.9.3 | ``-S-`` |
+| CMake/3.4.1-foss-2015b | ``-S-`` |
+| CMake/3.4.1-foss-2016a | ``--A`` |
+| CMake/3.4.1-intel-2015b | ``-SA`` |
+| CMake/3.4.3-intel-2016a | ``-S-`` |
+| CMake/3.5.1-intel-2016a | ``-S-`` |
+| CMake/3.5.2 | ``-SA`` |
+| CMake/3.5.2-GCC-4.9.3-2.25 | ``-S-`` |
+| CMake/3.5.2-foss-2016a | ``-SA`` |
+| CMake/3.5.2-intel-2016a | ``--A`` |
+| CMake/3.5.2-intel-2017.00 | ``-S-`` |
+| CMake/3.6.2 | ``-SA`` |
+| COMSOL/51-COM | ``-S-`` |
+| COMSOL/51-EDU | ``-S-`` |
+| CP2K/2.6.0-intel-2015b | ``-S-`` |
+| CUDA/7.5.18 | ``--A`` |
+| Clang/3.7.0-GNU-5.1.0-2.25 | ``-S-`` |
+| Code_Saturne/3.0.5 | ``--A`` |
+| Cube/4.3.4-intel-2015b | ``-S-`` |
+| DCW/1.1.2 | ``-S-`` |
+| DDT/4.2 | ``-S-`` |
+| DDT/5.0.1 | ``-S-`` |
+| Digimat/5.0.1-COM | ``-S-`` |
+| Digimat/5.0.1-EDU | ``-S-`` |
+| Discovery_Studio/4.0 | ``--A`` |
+| Doxygen/1.8.10-foss-2015b | ``-S-`` |
+| Doxygen/1.8.10-intel-2017.00 | ``-S-`` |
+| Doxygen/1.8.11 | ``-SA`` |
+| Doxygen/1.8.11-intel-2017.00 | ``-S-`` |
+| Doxygen/1.8.7-foss-2015g | ``-S-`` |
+| Doxygen/1.8.7-intel-2015b | ``-S-`` |
+| Doxygen/1.8.7-intel-2016.01 | ``-S-`` |
+| EasyBuild/2.8.0 | ``-SA`` |
+| EasyBuild/2.8.1 | ``--A`` |
+| EasyBuild/2.9.0 | ``-S-`` |
+| EasyBuild/3.0.0 | ``-SA`` |
+| EasyBuild/3.0.1 | ``-S-`` |
+| EasyBuild/3.0.2 | ``-SA`` |
+| FFTW/2.1.5-gompi-2015b | ``-S-`` |
+| FFTW/2.1.5-iimpi-7.3.5-GNU-5.1.0-2.25 | ``-S-`` |
+| FFTW/3.3.4-gompi-2015b | ``-S-`` |
+| FFTW/3.3.4-gompi-2015e | ``-S-`` |
+| FFTW/3.3.4-gompi-2015g | ``-SA`` |
+| FFTW/3.3.4-gompi-2016.04 | ``-SA`` |
+| FFTW/3.3.4-gompi-2016a | ``-SA`` |
+| FFTW/3.3.4-intel-2015b | ``-SA`` |
+| FFTW/3.3.4-intel-2016.01 | ``-S-`` |
+| FFTW/3.3.5-foss-2016a | ``-S-`` |
+| FFTW/3.3.5-gompi-2016a | ``-S-`` |
+| FFTW/3.3.5-intel-2016.01 | ``-S-`` |
+| FFTW/3.3.5-intel-2016a | ``-S-`` |
+| FFTW/3.3.5-intel-2017.00 | ``-SA`` |
+| FIAT/1.6.0-intel-2015b-Python-2.7.11 | ``-S-`` |
+| FIAT/1.6.0-intel-2015b-Python-2.7.9 | ``-S-`` |
+| FIAT/1.6.0-intel-2016.01-Python-2.7.9 | ``-S-`` |
+| FLTK/1.3.2 | ``-SA`` |
+| FLTK/1.3.2-intel-2015b | ``-S-`` |
+| FOX/1.6.51-foss-2015g | ``-S-`` |
+| FastQC/0.11.3 | ``-S-`` |
+| Forge/5.1-43967 | ``-SA`` |
+| Forge/5.7 | ``--A`` |
+| Forge/6.0.5 | ``-SA`` |
+| Forge/6.0.6 | ``-SA`` |
+| Forge/6.1.2 | ``-SA`` |
+| FreeFem++/3.45-intel-2015b | ``-S-`` |
+| GATK/2.6-5-Java-1.7.0_79 | ``-S-`` |
+| GATK/3.5-Java-1.7.0_79 | ``-S-`` |
+| GCC/4.4.7-system | ``-S-`` |
+| GCC/4.7.4 | ``-S-`` |
+| GCC/4.8.3 | ``-S-`` |
+| GCC/4.9.2 | ``-S-`` |
+| GCC/4.9.2-binutils-2.25 | ``-S-`` |
+| GCC/4.9.3 | ``-SA`` |
+| GCC/4.9.3-2.25 | ``-SA`` |
+| GCC/4.9.3-binutils-2.25 | ``-SA`` |
+| GCC/5.1.0-binutils-2.25 | ``-SA`` |
+| GCC/5.2.0 | ``-S-`` |
+| GCC/5.3.0-2.25 | ``-S-`` |
+| GCC/5.3.0-2.26 | ``-SA`` |
+| GCC/5.3.0-binutils-2.25 | ``-SA`` |
+| GCC/5.3.1-snapshot-20160419-2.25 | ``-S-`` |
+| GCC/5.4.0-2.26 | ``-S-`` |
+| GCC/6.2.0-2.27 | ``-S-`` |
+| GCCcore/4.9.3 | ``-SA`` |
+| GCCcore/5.3.0 | ``-SA`` |
+| GCCcore/5.3.1-snapshot-20160419 | ``-S-`` |
+| GCCcore/5.4.0 | ``-SA`` |
+| GCCcore/6.2.0 | ``-S-`` |
+| GDAL/1.9.2-foss-2015g | ``-SA`` |
+| GDAL/2.0.1-foss-2015b | ``-S-`` |
+| GDAL/2.0.2-intel-2017.00 | ``-S-`` |
+| GDAL/2.1.0-GNU-5.1.0-2.25 | ``-S-`` |
+| GDAL/2.1.0-GNU-5.1.0-2.25-intel-2015b | ``-S-`` |
+| GDAL/2.1.0-foss-2015g | ``-SA`` |
+| GDAL/2.1.0-intel-2015b | ``-S-`` |
+| GEOS/3.5.0-foss-2015g | ``-S-`` |
+| GLOBUS/globus | ``--A`` |
+| GLib/2.40.0 | ``-SA`` |
+| GLib/2.40.0-foss-2015g | ``-S-`` |
+| GLib/2.40.0-intel-2015b | ``-S-`` |
+| GLib/2.40.0-intel-2016.01 | ``-S-`` |
+| GMP/5.0.5 | ``-SA`` |
+| GMP/5.0.5-foss-2015b | ``-S-`` |
+| GMP/5.0.5-foss-2015g | ``-SA`` |
+| GMP/5.0.5-intel-2015b | ``-S-`` |
+| GMP/6.0.0a | ``-SA`` |
+| GMP/6.0.0a-GNU-4.9.3-2.25 | ``-S-`` |
+| GMP/6.0.0a-GNU-5.1.0-2.25 | ``-S-`` |
+| GMP/6.0.0a-foss-2015b | ``-S-`` |
+| GMP/6.0.0a-intel-2015b | ``--A`` |
+| GMP/6.1.0-GCC-4.9.3-2.25 | ``-S-`` |
+| GMP/6.1.0-foss-2016a | ``-SA`` |
+| GMP/6.1.0-intel-2015b | ``-SA`` |
+| GMP/6.1.0-intel-2016.01 | ``-S-`` |
+| GMP/6.1.0-intel-2016a | ``-S-`` |
+| GMP/6.1.0-intel-2017.00 | ``-SA`` |
+| GMP/6.1.1-intel-2017.00 | ``-S-`` |
+| GMT/5.2.1-foss-2015g | ``-S-`` |
+| GNU/4.9.3-2.25 | ``-SA`` |
+| GNU/5.1.0-2.25 | ``-SA`` |
+| GNU/5.1.0-2.25-intel-2015b | ``-S-`` |
+| GPI-2/1.1.1-gompi-2015e | ``-S-`` |
+| GPI-2/1.1.1-gompi-2015e-MPI | ``-S-`` |
+| GROMACS/4.6.7-foss-2015g-hybrid-single-PLUMED | ``-S-`` |
+| GROMACS/5.0.4-foss-2015e-hybrid-single-PLUMED | ``-S-`` |
+| GROMACS/5.0.4-foss-2015g-hybrid-single | ``-S-`` |
+| GROMACS/5.0.4-foss-2015g-hybrid-single-PLUMED | ``-S-`` |
+| GROMACS/5.0.4-ictce-7.3.5-hybrid-single | ``-S-`` |
+| GROMACS/5.1.2-foss-2015g-hybrid-single-PLUMED | ``-S-`` |
+| GROMACS/5.1.2-intel-2015b-hybrid-single-CUDA-7.5-PLUMED-2.2.1 | ``--A`` |
+| GROMACS/5.1.2-intel-2015b-hybrid-single-CUDA-7.5-PLUMED-2.2.1-test | ``--A`` |
+| GROMACS/5.1.2-intel-2015b-hybrid-single-cuda | ``--A`` |
+| GROMACS/5.1.2-intel-2016a-hybrid | ``--A`` |
+| GSL/1.16-intel-2015b | ``-SA`` |
+| GSL/1.16-intel-2016.01 | ``--A`` |
+| GSL/2.1-intel-2015b | ``--A`` |
+| HDF5/1.10.0-patch1-intel-2016.01-mic | ``-S-`` |
+| HDF5/1.8.13-foss-2015g | ``-S-`` |
+| HDF5/1.8.13-intel-2015b | ``-S-`` |
+| HDF5/1.8.13-intel-2015b-no-mpi | ``-S-`` |
+| HDF5/1.8.13-intel-2016.01 | ``-S-`` |
+| HDF5/1.8.14-ictce-7.3.5-serial | ``-S-`` |
+| HDF5/1.8.15-patch1-foss-2015b | ``-S-`` |
+| HDF5/1.8.16-foss-2015g | ``-S-`` |
+| HDF5/1.8.16-foss-2016a | ``-SA`` |
+| HDF5/1.8.16-intel-2015b | ``-SA`` |
+| HDF5/1.8.16-intel-2015b-threadsafe | ``-S-`` |
+| HDF5/1.8.16-intel-2016.01 | ``--A`` |
+| HDF5/1.8.16-intel-2017.00 | ``-S-`` |
+| HPL/2.1-foss-2015b | ``-S-`` |
+| HPL/2.1-intel-2015b | ``-S-`` |
+| HTSlib/1.3-foss-2015g | ``-S-`` |
+| Harminv/1.4-intel-2015b | ``-S-`` |
+| HyperWorks/13.0 | ``-S-`` |
+| Hypre/2.10.0b-intel-2015b | ``-S-`` |
+| Hypre/2.10.0b-intel-2016.01 | ``-S-`` |
+| Hypre/2.10.1-intel-2015b | ``-S-`` |
+| ISL/0.14-GNU-5.1.0-2.25 | ``-S-`` |
+| ISL/0.15 | ``-SA`` |
+| ISL/0.15-GCC-4.9.3-2.25 | ``-S-`` |
+| ISL/0.15-GNU-4.9.3-2.25 | ``-S-`` |
+| Inspector/2016_update1 | ``-S-`` |
+| JOE/4.2 | ``-SA`` |
+| JUnit/4.11-Java-1.7.0_79 | ``-S-`` |
+| JasPer/1.900.1-intel-2015b | ``-S-`` |
+| Java/1.7.0_79 | ``-SA`` |
+| Java/1.8.0_112 | ``-S-`` |
+| Java/1.8.0_51 | ``-SA`` |
+| Java/1.8.0_72 | ``-S-`` |
+| LAMMPS/28Jun14-intel-2015b | ``-S-`` |
+| LAPACKE/3.5.0-LAPACK-3.5.0 | ``-S-`` |
+| LLVM/3.7.1-foss-2015g | ``-S-`` |
+| LLVM/3.7.1-intel-2016a | ``-S-`` |
+| LLVM/3.8.0-foss-2016a | ``-S-`` |
+| LLVM/3.8.0-intel-2016a | ``-S-`` |
+| LLVM/3.9.0-intel-2017.00 | ``-S-`` |
+| LibTIFF/4.0.3 | ``-SA`` |
+| LibTIFF/4.0.3-intel-2015b | ``-S-`` |
+| Libint/1.1.4-foss-2015b | ``-S-`` |
+| Libint/1.1.4-gompi-2015b | ``-S-`` |
+| Libint/1.1.4-intel-2015b | ``-S-`` |
+| Lmod/6.4.2 | ``--A`` |
+| Lmod/7.0.6 | ``-SA`` |
+| Lmod/7.2.2 | ``-SA`` |
+| Lua/5.1.4-8 | ``-SA`` |
+| M4/1.4.16-foss-2015g | ``-S-`` |
+| M4/1.4.16-intel-2015b | ``-SA`` |
+| M4/1.4.17 | ``-SA`` |
+| M4/1.4.17-GCC-4.9.3 | ``--A`` |
+| M4/1.4.17-GCC-4.9.3-2.25 | ``-S-`` |
+| M4/1.4.17-GCC-4.9.3-binutils-2.25 | ``-SA`` |
+| M4/1.4.17-GCC-5.1.0-binutils-2.25 | ``-SA`` |
+| M4/1.4.17-GCCcore-4.9.3 | ``-SA`` |
+| M4/1.4.17-GCCcore-5.3.0 | ``-SA`` |
+| M4/1.4.17-GCCcore-5.3.1-snapshot-20160419 | ``-S-`` |
+| M4/1.4.17-GCCcore-5.4.0 | ``-SA`` |
+| M4/1.4.17-GCCcore-6.2.0 | ``-S-`` |
+| M4/1.4.17-GNU-4.9.3-2.25 | ``-SA`` |
+| M4/1.4.17-GNU-5.1.0-2.25 | ``-SA`` |
+| M4/1.4.17-foss-2015b | ``-S-`` |
+| M4/1.4.17-foss-2015g | ``-S-`` |
+| M4/1.4.17-foss-2016a | ``-SA`` |
+| M4/1.4.17-intel-2015b | ``-SA`` |
+| M4/1.4.17-intel-2016.01 | ``-S-`` |
+| M4/1.4.17-intel-2016a | ``-S-`` |
+| M4/1.4.17-intel-2017.00 | ``-SA`` |
+| MAP/4.2 | ``-S-`` |
+| MAP/5.0.1 | ``-S-`` |
+| MATLAB/2015a-COM | ``-SA`` |
+| MATLAB/2015a-EDU | ``-SA`` |
+| MATLAB/2015b-COM | ``-SA`` |
+| MATLAB/2015b-EDU | ``-SA`` |
+| METIS/5.1.0-intel-2015b | ``-S-`` |
+| METIS/5.1.0-intel-2016.01 | ``-S-`` |
+| METIS/5.1.0-intel-2016.01-32bitIDX | ``-S-`` |
+| METIS/5.1.0-intel-2017.00 | ``-S-`` |
+| MIKE/2014 | ``-SA`` |
+| MIKE/2016 | ``-SA`` |
+| MIKE/2016-SP2 | ``-SA`` |
+| MIKE/default | ``--A`` |
+| MLD2P4/2.0-rc4-GCC-4.9.3-2.25 | ``--A`` |
+| MPC/1.0.2-intel-2017.00 | ``-S-`` |
+| MPFR/3.1.5-intel-2017.00 | ``-S-`` |
+| MPICH/3.2-GCC-4.9.3-2.25 | ``--A`` |
+| MPICH/3.2-GCC-5.3.0-2.25 | ``-S-`` |
+| MPICH/3.2-GCC-5.3.1-snapshot-20160419-2.25 | ``-S-`` |
+| MPI_NET/1.2.0-gompi-2015e | ``-S-`` |
+| MPI_NET/1.2.0-intel-2016.01 | ``-S-`` |
+| MVAPICH2/2.1-GCC-4.4.7-system | ``-S-`` |
+| MVAPICH2/2.1-GNU-5.1.0-2.25 | ``-S-`` |
+| MVAPICH2/2.1-iccifort-2015.3.187-GNU-5.1.0-2.25 | ``-S-`` |
+| Marc/2013.1.0 | ``-S-`` |
+| Maven/3.3.9 | ``-SA`` |
+| Meep/1.3-intel-2015b | ``-S-`` |
+| Mercurial/3.5-Python-2.7.9 | ``-S-`` |
+| Mercurial/3.7.3-foss-2015g-Python-2.7.9 | ``-SA`` |
+| Mesa/11.0.8-foss-2015g-Python-2.7.9 | ``-S-`` |
+| Mesa/11.2.1-foss-2016a | ``-S-`` |
+| Molpro/2010.1-patch-57-intel2015b | ``-S-`` |
+| Mono/3.12.1 | ``-S-`` |
+| Mono/3.12.1-GCC-4.4.7-system | ``-S-`` |
+| Mono/4.0.3.20-GNU-5.1.0-2.25 | ``-S-`` |
+| Mono/4.2.2.10-intel-2016.01 | ``-S-`` |
+| NAMD/2.9-mpi | ``-S-`` |
+| NASM/2.11.05 | ``-SA`` |
+| NASM/2.11.05-foss-2015b | ``-S-`` |
+| NASM/2.11.05-foss-2015g | ``-S-`` |
+| NASM/2.11.05-intel-2015b | ``-S-`` |
+| NASM/2.11.06-intel-2015b | ``-S-`` |
+| NASM/2.11.08-foss-2015b | ``-S-`` |
+| NASM/2.11.08-intel-2017.00 | ``-S-`` |
+| NWChem/6.3.revision2-2013-10-17-Python-2.7.8 | ``-S-`` |
+| NWChem/6.5.revision26243-intel-2015b-2014-09-10-Python-2.7.8 | ``-S-`` |
+| OPARI2/1.1.4-intel-2015b | ``-S-`` |
+| OPARI2/2.0 | ``-SA`` |
+| ORCA/3_0_3-linux_x86-64 | ``-SA`` |
+| OSPRay/0.9.1 | ``-S-`` |
+| OTF2/1.4-intel-2015b | ``-S-`` |
+| OTF2/2.0 | ``-SA`` |
+| OTF2/2.0-intel-2015b-mic | ``-S-`` |
+| Octave/3.8.2-foss-2015g | ``-S-`` |
+| Octave/3.8.2-gimkl-2.11.5 | ``--A`` |
+| Octave/3.8.2-intel-2015b | ``-S-`` |
+| Octave/4.0.0-foss-2015g | ``-SA`` |
+| Octave/4.0.1-gimkl-2.11.5 | ``--A`` |
+| OpenBLAS/0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0 | ``-SA`` |
+| OpenBLAS/0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0 | ``-SA`` |
+| OpenBLAS/0.2.14-LAPACK-3.5.0 | ``-S-`` |
+| OpenBLAS/0.2.14-gompi-2015e-LAPACK-3.5.0 | ``-S-`` |
+| OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0 | ``-SA`` |
+| OpenBLAS/0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0 | ``--A`` |
+| OpenBLAS/0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0-gompi-2016a | ``--A`` |
+| OpenBLAS/0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0 | ``-SA`` |
+| OpenBLAS/0.2.19-GCC-5.4.0-2.26-LAPACK-3.6.0 | ``-S-`` |
+| OpenCL-builder/2015 | ``-S-`` |
+| OpenCL-runtime/15.1 | ``-S-`` |
+| OpenCV/2.4.9-intel-2015b | ``-S-`` |
+| OpenCV/3.0.0-intel-2015b | ``-S-`` |
+| OpenCoarrays/1.0.0-GNU-5.1.0-2.25 | ``-S-`` |
+| OpenCoarrays/1.0.1-GNU-5.1.0-2.25 | ``-S-`` |
+| OpenCoarrays/1.4.0-GCC-5.3.0-2.25 | ``-S-`` |
+| OpenCoarrays/1.4.0-GCC-5.3.1-snapshot-20160419-2.25 | ``-S-`` |
+| OpenDX/4.4.4-foss-2015g | ``-S-`` |
+| OpenFOAM/2.2.2-intel-2015b | ``-S-`` |
+| OpenFOAM/2.3.0-intel-2015b | ``-S-`` |
+| OpenFOAM/3.0.0-intel-2016.01 | ``-S-`` |
+| OpenMPI/1.10.1-GCC-4.9.3-2.25 | ``-S-`` |
+| OpenMPI/1.10.1-GNU-4.9.3-2.25 | ``-S-`` |
+| OpenMPI/1.10.2-GCC-4.9.3-2.25 | ``-SA`` |
+| OpenMPI/1.10.2-GCC-5.3.0-2.26 | ``-SA`` |
+| OpenMPI/1.8.6-GCC-4.4.7-system | ``-S-`` |
+| OpenMPI/1.8.6-GNU-5.1.0-2.25 | ``-S-`` |
+| OpenMPI/1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25 | ``-S-`` |
+| OpenMPI/1.8.8-GNU-4.9.3-2.25 | ``-SA`` |
+| OpenMPI/1.8.8-GNU-5.1.0-2.25 | ``-S-`` |
+| OpenMPI/1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25 | ``-SA`` |
+| PAPI/5.4.0-intel-2015b | ``-S-`` |
+| PAPI/5.4.0-mic | ``-S-`` |
+| PAPI/5.4.0-p-mic | ``-S-`` |
+| PAPI/5.4.3 | ``-SA`` |
+| PAPI/5.4.3-intel-2015b-mic | ``-S-`` |
+| PAPI/5.4.3-pic | ``-S-`` |
+| PCRE/8.36-foss-2015g | ``-S-`` |
+| PCRE/8.36-intel-2015b | ``-S-`` |
+| PCRE/8.36-intel-2016.01 | ``-S-`` |
+| PCRE/8.37 | ``-SA`` |
+| PCRE/8.37-foss-2015g | ``-SA`` |
+| PCRE/8.37-gimkl-2.11.5 | ``--A`` |
+| PCRE/8.37-intel-2016.01 | ``--A`` |
+| PCRE/8.39-intel-2017.00 | ``-S-`` |
+| PCRE2/10.22-intel-2017.00 | ``-S-`` |
+| PETSc/3.6.1-intel-2015b-Python-2.7.9 | ``-S-`` |
+| PETSc/3.6.1-intel-2016.01-Python-2.7.9 | ``-S-`` |
+| PETSc/3.6.3-intel-2015b-Python-2.7.11 | ``-S-`` |
+| PGI/15.7 | ``-S-`` |
+| PGI/16.10-GNU-4.9.3-2.25 | ``-S-`` |
+| PLUMED/2.1.3-foss-2015g | ``-S-`` |
+| PLUMED/2.2.1-intel-2015b | ``--A`` |
+| PLUMED/2.3b-foss-2015g | ``-S-`` |
+| PLUMED/2.3b-foss-2016a | ``--A`` |
+| PRACE/20150630-intel-2015b | ``-S-`` |
+| PRACE/prace | ``--A`` |
+| PROJ/4.8.0-foss-2015b | ``-S-`` |
+| PROJ/4.9.2-intel-2017.00 | ``-S-`` |
+| PROJ_4/4.9.2-foss-2015g | ``-S-`` |
+| PSBLAS-ext/1.0-4-GCC-4.9.3-2.25 | ``--A`` |
+| PSBLAS/3.3.4-3-GCC-4.9.3-2.25 | ``--A`` |
+| ParMETIS/4.0.3-intel-2015b | ``-S-`` |
+| ParMETIS/4.0.3-intel-2016.01 | ``-S-`` |
+| ParaView/4.3-OSPRay | ``-S-`` |
+| ParaView/5.0.0-binary | ``-S-`` |
+| PerfReports/5.0.1 | ``-S-`` |
+| PerformanceReports/5.1-43967 | ``-S-`` |
+| PerformanceReports/6.0.6 | ``-SA`` |
+| Perl/5.16.3-intel-2015b | ``-S-`` |
+| Perl/5.20.2-GNU-4.9.3-2.25-bare | ``-SA`` |
+| Perl/5.20.2-bare | ``-S-`` |
+| Perl/5.22.2-intel-2017.00 | ``-S-`` |
+| Perl/5.24.0-GCC-4.9.3-2.25-bare | ``--A`` |
+| PrgEnv-gnu/4.4.6 | ``--A`` |
+| PrgEnv-gnu/4.4.6-test | ``--A`` |
+| PrgEnv-gnu/4.8.1 | ``--A`` |
+| PrgEnv-intel/13.5.192 | ``--A`` |
+| PrgEnv-intel/14.0.1 | ``--A`` |
+| PrgEnv-intel/15.0.3 | ``--A`` |
+| PyQt/4.11.3-foss-2015g-Python-2.7.9 | ``-S-`` |
+| PyQt/4.11.4-foss-2015g-Python-2.7.9 | ``-S-`` |
+| PyYAML/3.11-intel-2015b-Python-2.7.9 | ``-S-`` |
+| Python/2.7.10-GCC-4.9.3-2.25-bare | ``-S-`` |
+| Python/2.7.10-GNU-4.9.3-2.25-bare | ``-S-`` |
+| Python/2.7.11-GCC-4.9.3-2.25-bare | ``-S-`` |
+| Python/2.7.11-foss-2016a | ``-S-`` |
+| Python/2.7.11-intel-2015b | ``-SA`` |
+| Python/2.7.11-intel-2016a | ``-S-`` |
+| Python/2.7.11-intel-2017.00 | ``-S-`` |
+| Python/2.7.8-intel-2015b | ``-S-`` |
+| Python/2.7.8-intel-2016.01 | ``-S-`` |
+| Python/2.7.9 | ``-SA`` |
+| Python/2.7.9-GNU-5.1.0-2.25 | ``-S-`` |
+| Python/2.7.9-foss-2015b | ``-S-`` |
+| Python/2.7.9-foss-2015g | ``-SA`` |
+| Python/2.7.9-gompi-2015e | ``-S-`` |
+| Python/2.7.9-ictce-7.3.5 | ``-S-`` |
+| Python/2.7.9-intel-2015b | ``-SA`` |
+| Python/2.7.9-intel-2016.01 | ``-SA`` |
+| Python/3.4.3-intel-2015b | ``-S-`` |
+| Python/3.5.1 | ``-S-`` |
+| Python/3.5.1-intel-2016.01 | ``-S-`` |
+| Python/3.5.1-intel-2017.00 | ``-S-`` |
+| Python/3.5.2 | ``-S-`` |
+| Python/3.5.2-foss-2016a | ``-SA`` |
+| Python/3.5.2-intel-2017.00 | ``-SA`` |
+| QCA/2.1.0-foss-2015g | ``-S-`` |
+| QEMU/2.1.2-GCC-4.4.7-system | ``-S-`` |
+| QEMU/2.1.2-GCC-4.4.7-system-VDE2 | ``-S-`` |
+| QGIS/2.12.3-foss-2015g | ``-S-`` |
+| Qt/4.8.6 | ``-SA`` |
+| Qt/4.8.6-foss-2015g | ``-S-`` |
+| QuantumESPRESSO/5.4.0-intel-2017.00 | ``-SA`` |
+| Qwt/6.1.2-foss-2015g | ``-S-`` |
+| R/3.0.1 | ``--A`` |
+| R/3.1.1 | ``--A`` |
+| R/3.1.1-intel-2015b | ``-S-`` |
+| R/3.2.3-foss-2015b | ``-S-`` |
+| R/3.2.3-intel-2016.01 | ``-S-`` |
+| RELION/1.3-intel-2015b | ``-S-`` |
+| RStudio/0.98.1103 | ``-S-`` |
+| Racket/6.1.1-GNU-5.1.0-2.25 | ``-S-`` |
+| Rstudio/0.97 | ``--A`` |
+| Ruby/2.1.5-intel-2015b | ``-S-`` |
+| Ruby/2.3.1 | ``-SA`` |
+| S4MPLE/1.0.0 | ``-S-`` |
+| SAMtools/1.3-foss-2015g | ``-S-`` |
+| SCOTCH/5.1.12b_esmumps-foss-2015b | ``-S-`` |
+| SCOTCH/6.0.0_esmumps-intel-2015b | ``-S-`` |
+| SCOTCH/6.0.3-intel-2015b | ``-S-`` |
+| SCOTCH/6.0.3-intel-2016.01 | ``-S-`` |
+| SCOTCH/6.0.4-intel-2015b | ``-S-`` |
+| SCOTCH/6.0.4-intel-2016.01 | ``-S-`` |
+| SCons/2.3.6-Python-2.7.9 | ``-S-`` |
+| SCons/2.3.6-foss-2015g-Python-2.7.9 | ``-SA`` |
+| SDE/7.41.0 | ``-S-`` |
+| SIONlib/1.6.1-intel-2015b-tools | ``-S-`` |
+| SIONlib/1.6.1-tools | ``-SA`` |
+| SIP/4.16.4-foss-2015g-Python-2.7.9 | ``-S-`` |
+| SIP/4.17-Python-2.7.9 | ``-S-`` |
+| SIP/4.17-foss-2015g-Python-2.7.9 | ``-S-`` |
+| SQLite/3.8.8.1-foss-2016a | ``--A`` |
+| SUMO/0.25.0-foss-2015g | ``-S-`` |
+| SUMO/0.26.0-foss-2015g | ``-S-`` |
+| SUMO/0.27.1-foss-2015g | ``-S-`` |
+| SWIG/2.0.12-Python-2.7.9 | ``-S-`` |
+| SWIG/2.0.12-intel-2015b-Python-2.7.9 | ``-S-`` |
+| SWIG/3.0.7-Python-2.7.9 | ``-S-`` |
+| ScaLAPACK/2.0.2-OpenBLAS-0.2.14-LAPACK-3.5.0 | ``-S-`` |
+| ScaLAPACK/2.0.2-gompi-2015b-OpenBLAS-0.2.14-LAPACK-3.5.0 | ``-S-`` |
+| ScaLAPACK/2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0 | ``-S-`` |
+| ScaLAPACK/2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0 | ``-SA`` |
+| ScaLAPACK/2.0.2-gompi-2016.04-OpenBLAS-0.2.18-LAPACK-3.6.0 | ``-SA`` |
+| ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0 | ``-SA`` |
+| Scalasca/2.3.1-intel-2015b | ``-S-`` |
+| ScientificPython/2.9.4-intel-2015b-Python-2.7.11 | ``-SA`` |
+| ScientificPython/2.9.4-intel-2015b-Python-2.7.9 | ``-SA`` |
+| ScientificPython/2.9.4-intel-2016.01-Python-2.7.9 | ``-SA`` |
+| Scipion/1.0.1-Java-8u112-intel-2017.00 | ``-S-`` |
+| Score-P/3.0-intel-2015b | ``-S-`` |
+| Serf/1.3.8-foss-2015g | ``-SA`` |
+| Siesta/4.1-b2-intel-2017.00 | ``-S-`` |
+| SnpEff/4.1_G | ``-S-`` |
+| SnuCL/1.3.3-gompi-2015e | ``-S-`` |
+| Spark/1.5.2 | ``-S-`` |
+| SpatiaLite/4.3.0a-foss-2015g | ``-S-`` |
+| Subversion/1.8.16-foss-2015g | ``-SA`` |
+| SuiteSparse/4.4.3-intel-2015b-ParMETIS-4.0.3 | ``-S-`` |
+| SuiteSparse/4.4.3-intel-2016.01-ParMETIS-4.0.3 | ``-S-`` |
+| SuiteSparse/4.4.5-intel-2015b-METIS-5.1.0 | ``-S-`` |
+| SuiteSparse/4.4.6-intel-2015b-ParMETIS-4.0.3 | ``-S-`` |
+| SuiteSparse/4.5.3-intel-2017.00-METIS-5.1.0 | ``-S-`` |
+| Szip/2.1 | ``-SA`` |
+| Szip/2.1-foss-2015b | ``-S-`` |
+| Szip/2.1-foss-2015g | ``-S-`` |
+| Szip/2.1-foss-2016a | ``-SA`` |
+| Szip/2.1-ictce-7.3.5 | ``-S-`` |
+| Szip/2.1-intel-2015b | ``-SA`` |
+| Szip/2.1-intel-2016.01 | ``-SA`` |
+| Szip/2.1-intel-2017.00 | ``-S-`` |
+| Tcl/8.6.3-foss-2016a | ``--A`` |
+| TotalView/8.15.4-6-linux-x86-64 | ``-S-`` |
+| Trimmomatic/0.35-Java-1.7.0_79 | ``-S-`` |
+| VASP/5.4.1-intel-2015b-24Jun15 | ``-SA`` |
+| VASP/5.4.1-intel-2017.00-24Jun15 | ``-SA`` |
+| VDE2/2.3.2-GCC-4.4.7-system | ``-S-`` |
+| VTune/2016_update1 | ``-SA`` |
+| Valgrind/3.11.0-foss-2015b | ``-S-`` |
+| Valgrind/3.11.0-intel-2015b | ``-S-`` |
+| Vampir/8.5.0 | ``-SA`` |
+| Vampir/9.0.0 | ``-S-`` |
+| VampirServer/8.5.0-intel-2015b | ``-S-`` |
+| VampirServer/9.0.0-intel-2015b | ``-S-`` |
+| VirtualGL/2.4.1 | ``-S-`` |
+| VisIt/2.10.0 | ``-S-`` |
+| Wine/1.7.29-GCC-4.4.7-system | ``-S-`` |
+| Wine/1.7.29-GNU-5.1.0-2.25 | ``-S-`` |
+| XZ/5.2.2 | ``-SA`` |
+| XZ/5.2.2-foss-2016a | ``-SA`` |
+| XZ/5.2.2-intel-2016.01 | ``-S-`` |
+| XZ/5.2.2-intel-2017.00 | ``-SA`` |
+| abinit/7.10.1-gcc-openmpi | ``--A`` |
+| abinit/7.10.1-icc-impi | ``--A`` |
+| abinit/7.6.2 | ``--A`` |
+| adams/2013.2 | ``--A`` |
+| adios/1.8.0 | ``--A`` |
+| advisor_xe/2013.5 | ``--A`` |
+| advisor_xe/2015.1.10.380555 | ``--A`` |
+| aislinn/20160105-Python-2.7.9-gompi-2015e | ``-S-`` |
+| almost/2.1.0-foss-2015b | ``-S-`` |
+| almost/2.1.0-foss-2015g | ``-SA`` |
+| almost/2.1.0-foss-2016a | ``--A`` |
+| almost/2.1.0-intel-2015b | ``-S-`` |
+| ansys/14.5.x | ``--A`` |
+| ansys/15.0.x | ``--A`` |
+| ansys/16.0.x | ``--A`` |
+| ant/1.9.3-Java-1.7.0_79 | ``-S-`` |
+| arpack-ng/3.3.0-foss-2016a | ``-SA`` |
+| arpack-ng/3.3.0-intel-2015b | ``-S-`` |
+| arpack-ng/3.3.0-intel-2017.00 | ``-S-`` |
+| arpack-ng/3.4.0-intel-2017.00 | ``-S-`` |
+| beopest/12.0.1 | ``--A`` |
+| beopest/12.2 | ``--A`` |
+| beopest/13.3 | ``--A`` |
+| binutils/2.25-GCC-4.9.3 | ``--A`` |
+| blender/2.71 | ``--A`` |
+| boost/1.56-gcc-openmpi | ``--A`` |
+| boost/1.56-icc-impi | ``--A`` |
+| bowtie2/2.2.3 | ``--A`` |
+| bullxde/2.0 | ``-S-`` |
+| bullxmpi-1.2.4.3 | ``--A`` |
+| bullxmpi/bullxmpi-1.2.4.3 | ``--A`` |
+| bullxmpi/bullxmpi_1.2.4.1 | ``--A`` |
+| bupc/2.16.2 | ``--A`` |
+| byacc/20120526 | ``-SA`` |
+| byacc/20120526-foss-2015b | ``-S-`` |
+| byacc/20120526-foss-2015g | ``-SA`` |
+| byacc/20120526-foss-2016a | ``--A`` |
+| byacc/20120526-intel-2015b | ``-SA`` |
+| byacc/20150711-intel-2015b | ``--A`` |
+| cURL/7.37.1 | ``-SA`` |
+| cURL/7.37.1-foss-2015g | ``-SA`` |
+| cURL/7.37.1-intel-2015b | ``-S-`` |
+| cURL/7.37.1-intel-2016.01 | ``-S-`` |
+| cURL/7.45.0-foss-2015b | ``-S-`` |
+| cURL/7.47.0-intel-2017.00 | ``-S-`` |
+| cURL/7.51.0 | ``--A`` |
+| cURL/7.51.0-intel-2017.00 | ``-S-`` |
+| cairo/1.12.18 | ``-SA`` |
+| cairo/1.12.18-foss-2015b | ``-S-`` |
+| chicken/4.8.0.6 | ``--A`` |
+| cmake/2.8.11 | ``--A`` |
+| cmake/2.8.11-mic | ``--A`` |
+| comsol/43b-COM | ``--A`` |
+| comsol/43b-EDU | ``--A`` |
+| comsol/44-COM | ``--A`` |
+| comsol/44-EDU | ``--A`` |
+| comsol/50-COM | ``--A`` |
+| comsol/50-EDU | ``--A`` |
+| cp2k-mpi/2.5.1-gcc | ``--A`` |
+| cube/4.2.3-gcc | ``--A`` |
+| cube/4.2.3-icc | ``--A`` |
+| cuda/6.0.37 | ``--A`` |
+| cuda/6.5.14 | ``--A`` |
+| cuda/7.5 | ``--A`` |
+| dataspaces/1.4.0 | ``--A`` |
+| dhi-mike/2014 | ``--A`` |
+| dhi-mike/2016 | ``--A`` |
+| dhi-mike/2016-SP2 | ``--A`` |
+| dhi-mike/default | ``--A`` |
+| digimat/5.0.1 | ``--A`` |
+| dytran/2013.0.1 | ``--A`` |
+| elmer/7.0-r6695-dbg | ``--A`` |
+| elmer/7.0-r6695-opt | ``--A`` |
+| eudev/3.1.5-foss-2016a | ``-S-`` |
+| eudev/3.1.5-intel-2016a | ``-S-`` |
+| expat/2.1.0 | ``-SA`` |
+| expat/2.1.0-foss-2015b | ``-S-`` |
+| expat/2.1.0-foss-2015g | ``-SA`` |
+| expat/2.1.0-intel-2015b | ``-S-`` |
+| expat/2.1.0-intel-2017.00 | ``-S-`` |
+| fastqc/0.11.2 | ``--A`` |
+| fds/5.5.3 | ``--A`` |
+| fds/5.5.3-omp | ``--A`` |
+| fds/6.svn | ``--A`` |
+| ffmpeg/2.4 | ``-SA`` |
+| ffmpeg/2.4-foss-2015g | ``-S-`` |
+| ffmpeg/2.4-intel-2015b | ``-S-`` |
+| fftw2-mpi/2.1.5-gcc | ``--A`` |
+| fftw2-mpi/2.1.5-icc | ``--A`` |
+| fftw2/2.1.5-gcc | ``--A`` |
+| fftw2/2.1.5-icc | ``--A`` |
+| fftw3-mpi/3.3.3-gcc | ``--A`` |
+| fftw3-mpi/3.3.3-icc | ``--A`` |
+| fftw3/3.3.3-gcc | ``--A`` |
+| fftw3/3.3.3-icc | ``--A`` |
+| fixesproto/5.0 | ``-SA`` |
+| fixesproto/5.0-foss-2015g | ``-S-`` |
+| fixesproto/5.0-foss-2016a | ``-S-`` |
+| fixesproto/5.0-intel-2016a | ``-S-`` |
+| flex/2.5.39-GCC-4.9.3 | ``--A`` |
+| flex/2.5.39-foss-2016a | ``--A`` |
+| fontconfig/2.11.1 | ``-SA`` |
+| fontconfig/2.11.1-foss-2015b | ``-S-`` |
+| fontconfig/2.11.1-intel-2015b | ``-S-`` |
+| fontconfig/2.11.94-intel-2017.00 | ``-S-`` |
+| fontsproto/2.1.3 | ``-SA`` |
+| fontsproto/2.1.3-foss-2015g | ``-S-`` |
+| fontsproto/2.1.3-foss-2016a | ``-S-`` |
+| fontsproto/2.1.3-intel-2016a | ``-S-`` |
+| foss/2015b | ``-S-`` |
+| foss/2015e | ``-S-`` |
+| foss/2015g | ``-SA`` |
+| foss/2016.04 | ``-SA`` |
+| foss/2016a | ``-SA`` |
+| freetype/2.5.3 | ``-SA`` |
+| freetype/2.5.3-foss-2015b | ``-S-`` |
+| freetype/2.5.3-foss-2015g | ``-S-`` |
+| freetype/2.5.3-intel-2015b | ``-S-`` |
+| freetype/2.5.5-intel-2015b | ``-S-`` |
+| freetype/2.6.2-intel-2016a | ``-S-`` |
+| freetype/2.6.2-intel-2017.00 | ``-S-`` |
+| freetype/2.6.3-foss-2016a | ``-S-`` |
+| freetype/2.6.3-intel-2016a | ``-S-`` |
+| gatk/2.6-4 | ``--A`` |
+| gcc/4.8.1 | ``--A`` |
+| gcc/4.9.0 | ``--A`` |
+| gcc/5.4.0 | ``--A`` |
+| gettext/0.19.4 | ``--A`` |
+| gettext/0.19.6-intel-2017.00 | ``--A`` |
+| gimkl/2.11.5 | ``--A`` |
+| gimpi/2.11.5 | ``--A`` |
+| git/2.11.0 | ``-S-`` |
+| git/2.11.0-GNU-4.9.3-2.25 | ``--A`` |
+| git/2.8.0-GNU-4.9.3-2.25 | ``-SA`` |
+| git/2.8.0-intel-2017.00 | ``-S-`` |
+| git/2.9.0 | ``-S-`` |
+| git/2.9.2 | ``-S-`` |
+| globus | ``--A`` |
+| globus/globus | ``-S-`` |
+| glproto/1.4.16-foss-2015g | ``-S-`` |
+| glproto/1.4.17-foss-2016a | ``-S-`` |
+| glproto/1.4.17-intel-2016a | ``-S-`` |
+| gnuplot/4.6.5 | ``--A`` |
+| gompi/2015b | ``-S-`` |
+| gompi/2015e | ``-S-`` |
+| gompi/2015g | ``-SA`` |
+| gompi/2016.04 | ``-SA`` |
+| gompi/2016a | ``-SA`` |
+| gperf/3.0.4-foss-2015g | ``-S-`` |
+| gperf/3.0.4-foss-2016a | ``-S-`` |
+| gperf/3.0.4-intel-2016a | ``-S-`` |
+| gpi2/1.0.2 | ``--A`` |
+| gpi2/1.1.0 | ``--A`` |
+| gpi2/1.1.1 | ``--A`` |
+| grace/5.1.23 | ``--A`` |
+| grace/5.1.25-intel-2015b | ``-S-`` |
+| gsl/1.16-gcc | ``--A`` |
+| gsl/1.16-icc | ``--A`` |
+| guile/1.8.8 | ``-SA`` |
+| guile/1.8.8-foss-2015b | ``-S-`` |
+| guile/1.8.8-foss-2015g | ``-S-`` |
+| guile/1.8.8-foss-2016a | ``--A`` |
+| guile/1.8.8-intel-2015b | ``-SA`` |
+| gupc/4.8.0.3 | ``--A`` |
+| gzip/1.6 | ``-SA`` |
+| gzip/1.6-foss-2015g | ``-SA`` |
+| gzip/1.6-foss-2016a | ``--A`` |
+| gzip/1.6-intel-2015b | ``-SA`` |
+| h5py/2.4.0-ictce-7.3.5-Python-2.7.9-serial | ``-S-`` |
+| hdf5-parallel/1.8.11 | ``--A`` |
+| hdf5-parallel/1.8.11-gcc | ``--A`` |
+| hdf5-parallel/1.8.13 | ``--A`` |
+| hdf5-parallel/1.8.13-gcc | ``--A`` |
+| hdf5-parallel/1.8.13-gcc49 | ``--A`` |
+| hdf5/1.8.11 | ``--A`` |
+| hdf5/1.8.13 | ``--A`` |
+| hpg-aligner/1.0.0 | ``--A`` |
+| hpg-fastq/1.0.0 | ``--A`` |
+| hpg-variant/1.0.0 | ``--A`` |
+| hwloc/1.11.0 | ``-SA`` |
+| hwloc/1.11.0-GNU-4.9.3-2.25 | ``-SA`` |
+| hwloc/1.11.0-GNU-5.1.0-2.25 | ``-SA`` |
+| hwloc/1.11.1-iccifort-2015.3.187-GNU-4.9.3-2.25 | ``-SA`` |
+| hwloc/1.11.2-GCC-4.9.3-2.25 | ``-SA`` |
+| hwloc/1.11.3-GCC-5.3.0-2.26 | ``-SA`` |
+| hwloc/1.5-GCC-4.4.7-system | ``-S-`` |
+| hypermesh/12.0.110 | ``--A`` |
+| hyperworks/13.0 | ``--A`` |
+| icc/2013.5.192 | ``-S-`` |
+| icc/2013.5.192-GCC-4.8.3 | ``-S-`` |
+| icc/2015.3.187 | ``-S-`` |
+| icc/2015.3.187-GNU-4.9.3-2.25 | ``-SA`` |
+| icc/2015.3.187-GNU-5.1.0-2.25 | ``-SA`` |
+| icc/2016.0.109-GCC-4.9.3 | ``-S-`` |
+| icc/2016.1.150 | ``-S-`` |
+| icc/2016.1.150-GCC-4.9.3 | ``-S-`` |
+| icc/2016.1.150-GCC-4.9.3-2.25 | ``-SA`` |
+| icc/2016.3.210-GCC-5.3.0-2.26 | ``-S-`` |
+| icc/2017.0.098-GCC-5.4.0-2.26 | ``-SA`` |
+| iccifort/2013.5.192 | ``-S-`` |
+| iccifort/2013.5.192-GCC-4.8.3 | ``-S-`` |
+| iccifort/2015.3.187 | ``-S-`` |
+| iccifort/2015.3.187-GNU-4.9.3-2.25 | ``-SA`` |
+| iccifort/2015.3.187-GNU-5.1.0-2.25 | ``-SA`` |
+| iccifort/2016.0.109-GCC-4.9.3 | ``-S-`` |
+| iccifort/2016.1.150 | ``-S-`` |
+| iccifort/2016.1.150-GCC-4.9.3 | ``-S-`` |
+| iccifort/2016.1.150-GCC-4.9.3-2.25 | ``-SA`` |
+| iccifort/2016.3.210-GCC-5.3.0-2.26 | ``-S-`` |
+| iccifort/2017.0.098-GCC-5.4.0-2.26 | ``-SA`` |
+| ictce/5.5.0 | ``-S-`` |
+| ictce/7.3.5 | ``-S-`` |
+| ictce/8.3.5 | ``-S-`` |
+| ifort/2013.5.192 | ``-S-`` |
+| ifort/2013.5.192-GCC-4.8.3 | ``-S-`` |
+| ifort/2015.3.187 | ``-S-`` |
+| ifort/2015.3.187-GNU-4.9.3-2.25 | ``-SA`` |
+| ifort/2015.3.187-GNU-5.1.0-2.25 | ``-SA`` |
+| ifort/2016.0.109-GCC-4.9.3 | ``-S-`` |
+| ifort/2016.1.150 | ``-S-`` |
+| ifort/2016.1.150-GCC-4.9.3 | ``-S-`` |
+| ifort/2016.1.150-GCC-4.9.3-2.25 | ``-SA`` |
+| ifort/2016.3.210-GCC-5.3.0-2.26 | ``-S-`` |
+| ifort/2017.0.098-GCC-5.4.0-2.26 | ``-SA`` |
+| iimpi/2016.00-GCC-4.9.3 | ``-S-`` |
+| iimpi/2016.01-GCC-4.9.3 | ``-S-`` |
+| iimpi/2016.01-GCC-4.9.3-2.25 | ``-SA`` |
+| iimpi/2016.03-GCC-5.3.0-2.26 | ``-S-`` |
+| iimpi/2017.00-GCC-5.4.0-2.26 | ``-SA`` |
+| iimpi/5.5.0 | ``-S-`` |
+| iimpi/5.5.0-GCC-4.8.3 | ``-S-`` |
+| iimpi/7.3.5 | ``-S-`` |
+| iimpi/7.3.5-GNU-5.1.0-2.25 | ``-SA`` |
+| iimpi/8.1.5-GCC-4.9.3-2.25 | ``-SA`` |
+| iimpi/8.3.5 | ``-S-`` |
+| imkl/11.0.5.192-iimpi-5.5.0 | ``-S-`` |
+| imkl/11.0.5.192-iimpi-5.5.0-GCC-4.8.3 | ``-S-`` |
+| imkl/11.2.3.187 | ``-S-`` |
+| imkl/11.2.3.187-gimpi-2.11.5 | ``--A`` |
+| imkl/11.2.3.187-iimpi-7.3.5 | ``-S-`` |
+| imkl/11.2.3.187-iimpi-7.3.5-GNU-5.1.0-2.25 | ``-SA`` |
+| imkl/11.2.3.187-iompi-2015.03 | ``-S-`` |
+| imkl/11.3.0.109-iimpi-2016.00-GCC-4.9.3 | ``-S-`` |
+| imkl/11.3.1.150-iimpi-2016.00-GCC-4.9.3 | ``-S-`` |
+| imkl/11.3.1.150-iimpi-2016.01-GCC-4.9.3-2.25 | ``-SA`` |
+| imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25 | ``-SA`` |
+| imkl/11.3.1.150-iimpi-8.3.5 | ``-S-`` |
+| imkl/11.3.3.210-iimpi-2016.03-GCC-5.3.0-2.26 | ``-S-`` |
+| imkl/2017.0.098-iimpi-2017.00-GCC-5.4.0-2.26 | ``-SA`` |
+| impi/2017-BETA.ENG | ``-S-`` |
+| impi/2017.0.098-iccifort-2017.0.098-GCC-5.4.0-2.26 | ``-SA`` |
+| impi/4.1.1.036 | ``--A`` |
+| impi/4.1.1.036-iccifort-2013.5.192 | ``-S-`` |
+| impi/4.1.1.036-iccifort-2013.5.192-GCC-4.8.3 | ``-S-`` |
+| impi/5.0.3.048 | ``-SA`` |
+| impi/5.0.3.048-GCC-4.9.3 | ``--A`` |
+| impi/5.0.3.048-iccifort-2015.3.187 | ``-S-`` |
+| impi/5.0.3.048-iccifort-2015.3.187-GNU-5.1.0-2.25 | ``-SA`` |
+| impi/5.1.1.109-iccifort-2016.0.109-GCC-4.9.3 | ``-S-`` |
+| impi/5.1.2.150-iccifort-2016.1.150 | ``-S-`` |
+| impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3 | ``-S-`` |
+| impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25 | ``-SA`` |
+| impi/5.1.3.181-iccifort-2016.3.210-GCC-5.3.0-2.26 | ``-S-`` |
+| inputproto/2.3 | ``-SA`` |
+| inputproto/2.3-foss-2015g | ``-S-`` |
+| inputproto/2.3-intel-2015b | ``-S-`` |
+| inputproto/2.3.1-foss-2016a | ``-S-`` |
+| inputproto/2.3.1-intel-2016a | ``-S-`` |
+| inspector_xe/2013.5 | ``--A`` |
+| inspector_xe/2015.1.2.379161 | ``--A`` |
+| intel/13.5.192 | ``--A`` |
+| intel/14.0.1 | ``--A`` |
+| intel/15.2.164 | ``--A`` |
+| intel/15.3.187 | ``--A`` |
+| intel/2014.06 | ``-S-`` |
+| intel/2015b | ``-SA`` |
+| intel/2015b-intel-2015b | ``-S-`` |
+| intel/2016.00 | ``-S-`` |
+| intel/2016.01 | ``-SA`` |
+| intel/2016.03-GCC-5.3 | ``-S-`` |
+| intel/2016a | ``-SA`` |
+| intel/2017.00 | ``-SA`` |
+| intelpcm/2.6 | ``--A`` |
+| ipm/0.983-icc-impi | ``--A`` |
+| ipp/13.5.192 | ``--A`` |
+| ipp/14.0.1 | ``--A`` |
+| ipp/15.2.164 | ``--A`` |
+| ipp/15.3.187 | ``--A`` |
+| ipp/9.0.1.150 | ``-S-`` |
+| itac/8.1.4.045 | ``--A`` |
+| itac/9.0.3.051 | ``--A`` |
+| itac/9.1.2.024 | ``-S-`` |
+| java/1.7 | ``--A`` |
+| kbproto/1.0.6 | ``-SA`` |
+| kbproto/1.0.6-foss-2015g | ``-S-`` |
+| kbproto/1.0.6-intel-2015b | ``-S-`` |
+| kbproto/1.0.7 | ``-S-`` |
+| kbproto/1.0.7-foss-2016a | ``-S-`` |
+| kbproto/1.0.7-intel-2016a | ``-S-`` |
+| lam/7.1.4-icc | ``--A`` |
+| lammps/28Jun14 | ``--A`` |
+| libGLU/9.0.0-foss-2015g | ``-S-`` |
+| libICE/1.0.9 | ``-SA`` |
+| libICE/1.0.9-foss-2015g | ``-S-`` |
+| libICE/1.0.9-intel-2015b | ``-S-`` |
+| libMesh/0.9.5-intel-2016.01 | ``-S-`` |
+| libSM/1.2.2 | ``-SA`` |
+| libSM/1.2.2-foss-2015g | ``-S-`` |
+| libSM/1.2.2-intel-2015b | ``-S-`` |
+| libX11/1.6.2-Python-2.7.8 | ``-S-`` |
+| libX11/1.6.2-Python-2.7.9 | ``-SA`` |
+| libX11/1.6.2-foss-2015g-Python-2.7.9 | ``-S-`` |
+| libX11/1.6.2-intel-2015b-Python-2.7.9 | ``-S-`` |
+| libX11/1.6.3-foss-2016a | ``-S-`` |
+| libX11/1.6.3-intel-2016a | ``-S-`` |
+| libXau/1.0.8 | ``-SA`` |
+| libXau/1.0.8-foss-2015g | ``-S-`` |
+| libXau/1.0.8-foss-2016a | ``-S-`` |
+| libXau/1.0.8-intel-2015b | ``-S-`` |
+| libXau/1.0.8-intel-2016a | ``-S-`` |
+| libXdamage/1.1.4-foss-2015g-Python-2.7.9 | ``-S-`` |
+| libXdamage/1.1.4-foss-2016a | ``-S-`` |
+| libXdamage/1.1.4-intel-2016a | ``-S-`` |
+| libXdmcp/1.1.2 | ``-SA`` |
+| libXdmcp/1.1.2-foss-2015g | ``-S-`` |
+| libXdmcp/1.1.2-foss-2016a | ``-S-`` |
+| libXdmcp/1.1.2-intel-2015b | ``-S-`` |
+| libXdmcp/1.1.2-intel-2016a | ``-S-`` |
+| libXext/1.3.2-Python-2.7.8 | ``-S-`` |
+| libXext/1.3.3 | ``-SA`` |
+| libXext/1.3.3-foss-2015g | ``-S-`` |
+| libXext/1.3.3-foss-2015g-Python-2.7.9 | ``-S-`` |
+| libXext/1.3.3-foss-2016a | ``-S-`` |
+| libXext/1.3.3-intel-2015b | ``-S-`` |
+| libXext/1.3.3-intel-2016a | ``-S-`` |
+| libXfixes/5.0.1 | ``-SA`` |
+| libXfixes/5.0.1-foss-2015g | ``-S-`` |
+| libXfixes/5.0.1-foss-2016a | ``-S-`` |
+| libXfixes/5.0.1-intel-2016a | ``-S-`` |
+| libXfont/1.5.1-Python-2.7.9 | ``-SA`` |
+| libXfont/1.5.1-foss-2015g-Python-2.7.9 | ``-S-`` |
+| libXfont/1.5.1-foss-2016a-freetype-2.6.3 | ``-S-`` |
+| libXfont/1.5.1-intel-2016a | ``-S-`` |
+| libXfont/1.5.1-intel-2016a-freetype-2.6.3 | ``-S-`` |
+| libXft/2.3.2-intel-2015b | ``-S-`` |
+| libXinerama/1.1.3-intel-2015b | ``-S-`` |
+| libXrender/0.9.8 | ``-S-`` |
+| libXrender/0.9.8-intel-2015b | ``-S-`` |
+| libXt/1.1.4-foss-2015g-libX11-1.6.2 | ``-S-`` |
+| libXt/1.1.4-intel-2015b-libX11-1.6.2 | ``-S-`` |
+| libXt/1.1.4-libX11-1.6.2 | ``-SA`` |
+| libXt/1.1.5-foss-2015g | ``-S-`` |
+| libctl/3.2.2-intel-2015b | ``-S-`` |
+| libdrm/2.4.27 | ``-SA`` |
+| libdrm/2.4.27-foss-2015g | ``-S-`` |
+| libdrm/2.4.67-intel-2016a | ``-S-`` |
+| libdrm/2.4.68-foss-2016a | ``-S-`` |
+| libdrm/2.4.68-intel-2016a | ``-S-`` |
+| libffi/3.0.13 | ``-SA`` |
+| libffi/3.0.13-foss-2015b | ``-S-`` |
+| libffi/3.0.13-foss-2015g | ``-S-`` |
+| libffi/3.0.13-intel-2015b | ``-SA`` |
+| libffi/3.1-GNU-5.1.0-2.25 | ``-S-`` |
+| libffi/3.1-foss-2015b | ``-S-`` |
+| libffi/3.1-intel-2015b | ``-SA`` |
+| libffi/3.1-intel-2016.01 | ``-SA`` |
+| libffi/3.2.1-foss-2016a | ``--A`` |
+| libffi/3.2.1-intel-2017.00 | ``-S-`` |
+| libfontenc/1.1.3 | ``-SA`` |
+| libfontenc/1.1.3-foss-2015g | ``-S-`` |
+| libfontenc/1.1.3-foss-2016a | ``-S-`` |
+| libfontenc/1.1.3-intel-2016a | ``-S-`` |
+| libgdiplus/3.12 | ``-SA`` |
+| libgdiplus/3.12-GCC-4.4.7-system | ``-S-`` |
+| libgdiplus/3.12-GNU-5.1.0-2.25 | ``-S-`` |
+| libgdiplus/3.12-intel-2016.01 | ``-S-`` |
+| libjpeg-turbo/1.3.1-foss-2015b | ``-S-`` |
+| libjpeg-turbo/1.3.1-intel-2015b | ``-S-`` |
+| libjpeg-turbo/1.4.0 | ``-SA`` |
+| libjpeg-turbo/1.4.0-foss-2015g | ``-S-`` |
+| libjpeg-turbo/1.4.0-intel-2015b | ``-S-`` |
+| libjpeg-turbo/1.4.1-foss-2015b | ``-S-`` |
+| libjpeg-turbo/1.4.2-intel-2017.00 | ``-S-`` |
+| libmatheval/1.1.11-intel-2015b | ``--A`` |
+| libmatheval/1.1.8 | ``-SA`` |
+| libmatheval/1.1.8-foss-2015b | ``-S-`` |
+| libmatheval/1.1.8-foss-2015g | ``-S-`` |
+| libmatheval/1.1.8-foss-2016a | ``--A`` |
+| libmatheval/1.1.8-intel-2015b | ``-SA`` |
+| libmesh/0.9.3-petsc-3.4.4-icc-impi-mkl-dbg | ``--A`` |
+| libmesh/0.9.3-petsc-3.4.4-icc-impi-mkl-dbg-2d | ``--A`` |
+| libmesh/0.9.3-petsc-3.4.4-icc-impi-mkl-opt | ``--A`` |
+| libpciaccess/0.13.1 | ``-SA`` |
+| libpciaccess/0.13.1-foss-2015g | ``-S-`` |
+| libpciaccess/0.13.4-foss-2016a | ``-S-`` |
+| libpciaccess/0.13.4-intel-2016a | ``-S-`` |
+| libpng/1.6.16-intel-2015b | ``-S-`` |
+| libpthread-stubs/0.3 | ``-SA`` |
+| libpthread-stubs/0.3-foss-2015g | ``-S-`` |
+| libpthread-stubs/0.3-foss-2016a | ``-S-`` |
+| libpthread-stubs/0.3-intel-2015b | ``-S-`` |
+| libpthread-stubs/0.3-intel-2016a | ``-S-`` |
+| libreadline/6.3-gimkl-2.11.5 | ``--A`` |
+| libunistring/0.9.3 | ``-SA`` |
+| libunistring/0.9.3-foss-2015b | ``-S-`` |
+| libunistring/0.9.3-foss-2015g | ``-S-`` |
+| libunistring/0.9.3-foss-2016a | ``--A`` |
+| libunistring/0.9.3-intel-2015b | ``-SA`` |
+| libunwind/1.1-GCC-5.4.0-2.26 | ``-S-`` |
+| libxc/2.2.0-foss-2015b | ``-S-`` |
+| libxc/2.2.0-gompi-2015b | ``-S-`` |
+| libxc/2.2.1-intel-2015b | ``-S-`` |
+| libxcb/1.10-Python-2.7.8 | ``-S-`` |
+| libxcb/1.11-Python-2.7.9 | ``-SA`` |
+| libxcb/1.11-foss-2015g-Python-2.7.9 | ``-S-`` |
+| libxcb/1.11-intel-2015b-Python-2.7.9 | ``-S-`` |
+| libxcb/1.11.1-foss-2016a | ``-S-`` |
+| libxcb/1.11.1-intel-2016a | ``-S-`` |
+| libxml2/2.9.2 | ``-S-`` |
+| libxml2/2.9.2-GCC-4.9.3-2.25 | ``-S-`` |
+| libxml2/2.9.2-GNU-4.9.3-2.25 | ``-S-`` |
+| libxml2/2.9.2-GNU-5.1.0-2.25 | ``-S-`` |
+| libxml2/2.9.2-foss-2015b | ``-S-`` |
+| libxml2/2.9.2-foss-2015g | ``-S-`` |
+| libxml2/2.9.2-foss-2015g-Python-2.7.9 | ``-S-`` |
+| libxml2/2.9.2-gompi-2015e | ``-S-`` |
+| libxml2/2.9.2-ictce-7.3.5 | ``-S-`` |
+| libxml2/2.9.2-intel-2015b | ``-SA`` |
+| libxml2/2.9.3-foss-2016a | ``-SA`` |
+| libxml2/2.9.3-intel-2016a | ``-SA`` |
+| libxml2/2.9.3-intel-2017.00 | ``-S-`` |
+| libxslt/1.1.28-intel-2015b | ``-S-`` |
+| libyaml/0.1.6-intel-2015b | ``-S-`` |
+| likwid/3.1.1-icc | ``--A`` |
+| likwid/3.1.1-mic | ``--A`` |
+| likwid/3.1.2-gcc | ``--A`` |
+| likwid/3.1.2-icc | ``--A`` |
+| likwid/3.1.2-mic | ``--A`` |
+| likwid/4.1.2-gcc | ``-S-`` |
+| likwid/4.1.2-intel | ``-S-`` |
+| llvm/3.6.0 | ``--A`` |
+| lmod/7.2.2 | ``-SA`` |
+| lsdyna/7.x.x | ``--A`` |
+| lsprepost/4.2 | ``--A`` |
+| lux/1.3.1 | ``--A`` |
+| lxml/3.4.4-intel-2015b-Python-2.7.9 | ``-S-`` |
+| magma/1.1.0-mic | ``--A`` |
+| magma/1.3.0-mic | ``--A`` |
+| make/3.82 | ``-SA`` |
+| make/3.82-intel-2015b | ``-S-`` |
+| makedepend/1.0.4 | ``-SA`` |
+| makedepend/1.0.4-foss-2015g | ``-S-`` |
+| makedepend/1.0.5-foss-2016a | ``-S-`` |
+| makedepend/1.0.5-intel-2016a | ``-S-`` |
+| marc/2011 | ``--A`` |
+| marc/2013.1 | ``--A`` |
+| matlab/R2013a-COM | ``--A`` |
+| matlab/R2013a-EDU | ``--A`` |
+| matlab/R2014a-COM | ``--A`` |
+| matlab/R2014a-EDU | ``--A`` |
+| matplotlib/1.4.3-intel-2015b-Python-2.7.9 | ``-S-`` |
+| maxwell/3.0 | ``--A`` |
+| memoryscape/3.4 | ``--A`` |
+| mercurial/2.9.1 | ``--A`` |
+| mkl/13.5.192 | ``--A`` |
+| mkl/14.0.1 | ``--A`` |
+| mkl/15.2.164 | ``--A`` |
+| mkl/15.3.187 | ``--A`` |
+| modflow-2005/1.11.00 | ``--A`` |
+| modflow-nwt/1.0.9 | ``--A`` |
+| modflow-nwt/1.0.9-aquaveo | ``--A`` |
+| molpro/2010.1-p45-intel | ``--A`` |
+| mono/3.12.1 | ``--A`` |
+| mono/3.2.3 | ``--A`` |
+| motif/2.3.4-foss-2015g-libX11-1.6.2 | ``-S-`` |
+| motif/2.3.4-intel-2015b-libX11-1.6.2 | ``-S-`` |
+| mpi.net/1.0.0 | ``--A`` |
+| mpi.net/1.0.0-impi | ``--A`` |
+| mpi.net/1.0.0-mono-3.12.1 | ``--A`` |
+| mpt/2.12 | ``-S-`` |
+| mvapich2/1.9-gcc | ``--A`` |
+| mvapich2/1.9-gcc46 | ``--A`` |
+| mvapich2/1.9-icc | ``--A`` |
+| mxml/2.9 | ``--A`` |
+| namd/2.8 | ``--A`` |
+| nastran/2013.1.1 | ``--A`` |
+| ncurses/5.9-GCC-4.9.3-2.25 | ``--A`` |
+| ncurses/5.9-gimkl-2.11.5 | ``--A`` |
+| netCDF-Fortran/4.4.0-intel-2016.01 | ``-S-`` |
+| netCDF/4.3.2-foss-2015g | ``-S-`` |
+| netCDF/4.3.2-intel-2015b | ``-S-`` |
+| netCDF/4.3.2-intel-2016.01 | ``-S-`` |
+| netCDF/4.3.3.1-foss-2015b | ``-S-`` |
+| netCDF/4.3.3.1-intel-2017.00 | ``-S-`` |
+| netCDF/4.4.0-intel-2017.00 | ``-S-`` |
+| netcdf-cxx/4.2 | ``--A`` |
+| netcdf-fortran/4.2 | ``--A`` |
+| netcdf-parallel/4.3.0 | ``--A`` |
+| netcdf/4.2.1.1 | ``--A`` |
+| netcdf/4.3.0 | ``--A`` |
+| ngsPipeline/1.0.0 | ``--A`` |
+| numactl/2.0.10 | ``-SA`` |
+| numactl/2.0.10-GNU-4.9.3-2.25 | ``-SA`` |
+| numactl/2.0.10-GNU-5.1.0-2.25 | ``-SA`` |
+| numactl/2.0.10-iccifort-2015.3.187-GNU-4.9.3-2.25 | ``-SA`` |
+| numactl/2.0.11 | ``-SA`` |
+| numactl/2.0.11-GCC-4.9.3-2.25 | ``-SA`` |
+| numactl/2.0.11-GCC-5.3.0-2.26 | ``-SA`` |
+| numactl/2.0.9 | ``--A`` |
+| numactl/2.0.9-GCC-4.4.7-system | ``-S-`` |
+| numpy/1.8.2-intel-2015b-Python-2.7.11 | ``-SA`` |
+| numpy/1.8.2-intel-2015b-Python-2.7.9 | ``-SA`` |
+| numpy/1.8.2-intel-2016.01-Python-2.7.9 | ``-SA`` |
+| numpy/1.9.1-intel-2015b-Python-2.7.9 | ``-S-`` |
+| nwchem/6.1.1 | ``--A`` |
+| nwchem/6.3-rev2-patch1 | ``--A`` |
+| nwchem/6.3-rev2-patch1-openmpi | ``--A`` |
+| nwchem/6.3-rev2-patch1-venus | ``--A`` |
+| opari2/1.1.2-gcc | ``--A`` |
+| opari2/1.1.2-icc | ``--A`` |
+| opencl-rt/4.5.0.8 | ``--A`` |
+| opencl-sdk/4.6.0.92 | ``--A`` |
+| openfoam/2.2.1-gcc481-openmpi1.6.5-DP | ``--A`` |
+| openfoam/2.2.1-gcc481-openmpi1.6.5-SP | ``--A`` |
+| openfoam/2.2.1-icc-impi4.1.1.036-DP | ``--A`` |
+| openfoam/2.2.1-icc-openmpi1.6.5-DP | ``--A`` |
+| openfoam/2.2.2-icc-openmpi1.8.1-DP | ``--A`` |
+| openmpi/1.6.5-gcc | ``--A`` |
+| openmpi/1.6.5-gcc46 | ``--A`` |
+| openmpi/1.6.5-icc | ``--A`` |
+| openmpi/1.8.1-gcc | ``--A`` |
+| openmpi/1.8.1-gcc46 | ``--A`` |
+| openmpi/1.8.1-gcc49 | ``--A`` |
+| openmpi/1.8.1-icc | ``--A`` |
+| openssh-x509/6.2p2 | ``--A`` |
+| oscar-modules/1.0.3 | ``-S-`` |
+| otf2/1.2.1-gcc | ``--A`` |
+| otf2/1.2.1-icc | ``--A`` |
+| otf2/1.4-gcc | ``--A`` |
+| otf2/1.4-icc | ``--A`` |
+| p4vasp/0.3.29-GNU-4.9.3-2.25 | ``-S-`` |
+| papi/5.3.0 | ``--A`` |
+| papi/5.3.2 | ``--A`` |
+| papi/5.3.2-mic | ``--A`` |
+| papi/5.4.0 | ``--A`` |
+| papi/5.4.0-mic | ``--A`` |
+| parallel/20141122 | ``--A`` |
+| parallel/20150322 | ``-S-`` |
+| parallel/20150322-GNU-5.1.0-2.25 | ``-S-`` |
+| paraview/4.0.1-gcc481-bullxmpi1.2.4.1-osmesa10.0 | ``--A`` |
+| perfboost/1.0 | ``-S-`` |
+| perfcatcher/1.0 | ``-S-`` |
+| perfsuite/1a5.3 | ``-S-`` |
+| pest/13.0 | ``--A`` |
+| petsc/3.5.3-icc15-impi-mkl-dbg | ``--A`` |
+| petsc/3.5.3-icc15-impi-mkl-opt | ``--A`` |
+| petsc/3.5.3-icc15-impi-mkl-threads-dbg | ``--A`` |
+| petsc/3.5.3-icc15-impi-mkl-threads-opt | ``--A`` |
+| petsc/3.7.3-icc16-impi5-mkl-dbg | ``--A`` |
+| petsc/3.7.3-icc16-impi5-mkl-opt | ``--A`` |
+| phono3py/1.11.7.8-intel-2015b-Python-2.7.9 | ``-S-`` |
+| phonopy/1.11.6.7-intel-2015b-Python-2.7.9 | ``-S-`` |
+| picard/1.117 | ``--A`` |
+| picard/1.119 | ``-S-`` |
+| picard/2.1.0 | ``-S-`` |
+| pigz/2.3.3-GCC-6.2.0-2.27 | ``-S-`` |
+| pixman/0.32.6 | ``-SA`` |
+| pixman/0.32.6-foss-2015b | ``-S-`` |
+| pixman/0.32.6-intel-2015b | ``-S-`` |
+| pkg-config/0.27.1 | ``-SA`` |
+| pkg-config/0.27.1-foss-2015b | ``-S-`` |
+| pkg-config/0.27.1-foss-2015g | ``-S-`` |
+| pkg-config/0.27.1-intel-2015b | ``-SA`` |
+| pkg-config/0.29 | ``-S-`` |
+| pkg-config/0.29-foss-2016a | ``-SA`` |
+| pkg-config/0.29-intel-2016a | ``-S-`` |
+| pkg-config/0.29.1-foss-2016a | ``-S-`` |
+| pkg-config/0.29.1-intel-2016a | ``-S-`` |
+| plasma/2.6.0 | ``--A`` |
+| prace | ``--A`` |
+| prace/20160107-intel-2016.01 | ``-S-`` |
+| python-meep/1.4.2-intel-2015b-Python-2.7.9-Meep-1.3 | ``-S-`` |
+| python/2.7.5 | ``--A`` |
+| python/2.7.6 | ``--A`` |
+| python/3.3.2 | ``--A`` |
+| python/3.3.5 | ``--A`` |
+| python/3.4.2 | ``--A`` |
+| qemu/2.1.0 | ``--A`` |
+| qemu/2.1.0-vde2 | ``--A`` |
+| qemu/2.1.2 | ``--A`` |
+| qemu/2.1.2-vde2 | ``--A`` |
+| racket/6.0.1 | ``--A`` |
+| relion/1.2 | ``--A`` |
+| relion/1.3 | ``--A`` |
+| renderproto/0.11 | ``-SA`` |
+| renderproto/0.11-intel-2015b | ``-S-`` |
+| ruby/2.0.0-p247 | ``--A`` |
+| samtools/0.1.19 | ``--A`` |
+| scalasca2/2.0-gcc-openmpi | ``--A`` |
+| scalasca2/2.0-icc-impi | ``--A`` |
+| scite/3.4.3 | ``--A`` |
+| scorep/1.2.3-gcc-openmpi | ``--A`` |
+| scorep/1.2.3-icc-impi | ``--A`` |
+| settarg/7.2.2 | ``-SA`` |
+| slepc/3.4.4-icc15-impi-mkl-dbg | ``--A`` |
+| slepc/3.4.4-icc15-impi-mkl-opt | ``--A`` |
+| slepc/3.7.2-icc16-impi5-mkl-dbg | ``--A`` |
+| slepc/3.7.2-icc16-impi5-mkl-opt | ``--A`` |
+| snpEff/3.6 | ``--A`` |
+| spGPU/master-GCC-4.9.3-2.25 | ``--A`` |
+| spatialindex/1.8.5-foss-2015g | ``-S-`` |
+| sympy/0.7.6-intel-2015b-Python-2.7.9 | ``-S-`` |
+| sympy/0.7.6-intel-2016.01-Python-2.7.9 | ``-S-`` |
+| sympy/0.7.6.1-intel-2015b-Python-2.7.11 | ``-S-`` |
+| szip/2.1 | ``--A`` |
+| tbb/13.5.192 | ``--A`` |
+| tbb/14.0.1 | ``--A`` |
+| tbb/15.2.164 | ``--A`` |
+| tbb/15.3.187 | ``--A`` |
+| tbb/4.3.5.187 | ``-S-`` |
+| tbb/4.4.2.152 | ``-SA`` |
+| tcl/8.5.15 | ``--A`` |
+| tcsh/6.18.01-intel-2015b | ``-S-`` |
+| tcsh/6.19.00 | ``-SA`` |
+| tk/8.5.15 | ``--A`` |
+| totalview/8.12 | ``--A`` |
+| totalview/8.13 | ``--A`` |
+| trilinos/11.2.3-gcc-openmpi-mkl-dbg | ``--A`` |
+| trilinos/11.2.3-gcc-openmpi-mkl-opt | ``--A`` |
+| trilinos/11.2.3-icc | ``--A`` |
+| turbovnc/1.2.2 | ``--A`` |
+| turbovnc/1.2.3 | ``-S-`` |
+| use.own | ``--A`` |
+| util-linux/2.26.1 | ``-SA`` |
+| util-linux/2.26.1-foss-2015g | ``-S-`` |
+| util-linux/2.28-intel-2016a | ``--A`` |
+| valgrind/3.9.0-impi | ``--A`` |
+| vampir/8.2 | ``--A`` |
+| vde2/2.3.2 | ``--A`` |
+| virtualgl/2.4 | ``--A`` |
+| vtune_xe/2013.15 | ``--A`` |
+| vtune_xe/2015.3.0.403110 | ``--A`` |
+| wien2k/13.1 | ``--A`` |
+| wien2k/14.2 | ``--A`` |
+| wine/1.7.29 | ``--A`` |
+| xbitmaps/1.1.1 | ``-SA`` |
+| xbitmaps/1.1.1-foss-2015g | ``-S-`` |
+| xbitmaps/1.1.1-intel-2015b | ``-S-`` |
+| xcb-proto/1.10-Python-2.7.8 | ``-S-`` |
+| xcb-proto/1.11 | ``-S-`` |
+| xcb-proto/1.11-Python-2.7.9 | ``-SA`` |
+| xcb-proto/1.11-foss-2015g-Python-2.7.9 | ``-S-`` |
+| xcb-proto/1.11-intel-2015b-Python-2.7.9 | ``-S-`` |
+| xdrfile/1.1.4-foss-2015g | ``-SA`` |
+| xdrfile/1.1.4-foss-2016a | ``--A`` |
+| xdrfile/1.1.4-intel-2015b | ``--A`` |
+| xextproto/7.3.0 | ``-SA`` |
+| xextproto/7.3.0-foss-2015g | ``-S-`` |
+| xextproto/7.3.0-foss-2016a | ``-S-`` |
+| xextproto/7.3.0-intel-2015b | ``-S-`` |
+| xextproto/7.3.0-intel-2016a | ``-S-`` |
+| xineramaproto/1.2.1 | ``-SA`` |
+| xineramaproto/1.2.1-intel-2015b | ``-S-`` |
+| xorg-macros/1.17 | ``-SA`` |
+| xorg-macros/1.17-foss-2015g | ``-S-`` |
+| xorg-macros/1.19.0-foss-2016a | ``-S-`` |
+| xorg-macros/1.19.0-intel-2016a | ``-S-`` |
+| xproto/7.0.26 | ``-SA`` |
+| xproto/7.0.26-foss-2015g | ``-S-`` |
+| xproto/7.0.26-intel-2015b | ``-S-`` |
+| xproto/7.0.28 | ``-S-`` |
+| xproto/7.0.28-foss-2016a | ``-S-`` |
+| xproto/7.0.28-intel-2016a | ``-S-`` |
+| xtrans/1.3.4 | ``--A`` |
+| xtrans/1.3.4-intel-2015b | ``-S-`` |
+| xtrans/1.3.5 | ``-SA`` |
+| xtrans/1.3.5-foss-2015g | ``-S-`` |
+| xtrans/1.3.5-foss-2016a | ``-S-`` |
+| xtrans/1.3.5-intel-2015b | ``-S-`` |
+| xtrans/1.3.5-intel-2016a | ``-S-`` |
+| zlib/1.2.5 | ``--A`` |
+| zlib/1.2.8-GCC-4.9.3 | ``--A`` |
diff --git a/docs.it4i/anselm-cluster-documentation/software/intel-xeon-phi.md b/docs.it4i/anselm-cluster-documentation/software/intel-xeon-phi.md
index 8ea1ba38a2798804b67e164d9e97eeed623bb5d8..80e76efecfacbe0a7158a13c0ca4658a695053ff 100644
--- a/docs.it4i/anselm-cluster-documentation/software/intel-xeon-phi.md
+++ b/docs.it4i/anselm-cluster-documentation/software/intel-xeon-phi.md
@@ -19,7 +19,7 @@ To set up the environment module "Intel" has to be loaded
$ module load intel/13.5.192
```
-Information about the hardware can be obtained by running the micinfo program on the host.
+Information about the hardware can be obtained by running the micinfo program on the host.
```bash
$ /usr/bin/micinfo
@@ -32,61 +32,61 @@ The output of the "micinfo" utility executed on one of the Anselm node is as fol
Created Mon Jul 22 00:23:50 2013
- Â Â Â Â Â Â Â System Info
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â HOST OSÂ Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â : Linux
-                OS Version             : 2.6.32-279.5.2.bl6.Bull.33.x86_64
-                Driver Version         : 6720-15
-                MPSS Version           : 2.1.6720-15
-                Host Physical Memory   : 98843 MB
+ System Info
+ HOST OS : Linux
+ OS Version : 2.6.32-279.5.2.bl6.Bull.33.x86_64
+ Driver Version : 6720-15
+ MPSS Version : 2.1.6720-15
+ Host Physical Memory : 98843 MB
Device No: 0, Device Name: mic0
- Â Â Â Â Â Â Â Version
-                Flash Version           : 2.1.03.0386
-                SMC Firmware Version    : 1.15.4830
-                SMC Boot Loader Version : 1.8.4326
-                uOS Version             : 2.6.38.8-g2593b11
-                Device Serial Number    : ADKC30102482
-
- Â Â Â Â Â Â Â Board
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Vendor IDÂ Â Â Â Â Â Â Â Â Â Â Â Â Â Â : 0x8086
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Device IDÂ Â Â Â Â Â Â Â Â Â Â Â Â Â Â : 0x2250
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Subsystem IDÂ Â Â Â Â Â Â Â Â Â Â Â : 0x2500
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Coprocessor Stepping IDÂ : 3
-                PCIe Width              : x16
-                PCIe Speed              : 5 GT/s
-                PCIe Max payload size   : 256 bytes
-                PCIe Max read req size  : 512 bytes
-                Coprocessor Model       : 0x01
-                Coprocessor Model Ext   : 0x00
-                Coprocessor Type        : 0x00
-                Coprocessor Family      : 0x0b
-                Coprocessor Family Ext  : 0x00
-                Coprocessor Stepping    : B1
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Board SKUÂ Â Â Â Â Â Â Â Â Â Â Â Â Â Â : B1PRQ-5110P/5120D
-                ECC Mode                : Enabled
-                SMC HW Revision         : Product 225W Passive CS
-
- Â Â Â Â Â Â Â Cores
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Total No of Active Cores : 60
-                Voltage                 : 1032000 uV
-                Frequency               : 1052631 kHz
-
- Â Â Â Â Â Â Â Thermal
-                Fan Speed Control       : N/A
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Fan RPMÂ Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â : N/A
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Fan PWMÂ Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â : N/A
-                Die Temp                : 49 C
-
- Â Â Â Â Â Â Â GDDR
-                GDDR Vendor             : Elpida
-                GDDR Version            : 0x1
-                GDDR Density            : 2048 Mb
-                GDDR Size               : 7936 MB
-                GDDR Technology         : GDDR5
-                GDDR Speed              : 5.000000 GT/s
-                GDDR Frequency          : 2500000 kHz
-                GDDR Voltage            : 1501000 uV
+ Version
+ Flash Version : 2.1.03.0386
+ SMC Firmware Version : 1.15.4830
+ SMC Boot Loader Version : 1.8.4326
+ uOS Version : 2.6.38.8-g2593b11
+ Device Serial Number : ADKC30102482
+
+ Board
+ Vendor ID : 0x8086
+ Device ID : 0x2250
+ Subsystem ID : 0x2500
+ Coprocessor Stepping ID : 3
+ PCIe Width : x16
+ PCIe Speed : 5 GT/s
+ PCIe Max payload size : 256 bytes
+ PCIe Max read req size : 512 bytes
+ Coprocessor Model : 0x01
+ Coprocessor Model Ext : 0x00
+ Coprocessor Type : 0x00
+ Coprocessor Family : 0x0b
+ Coprocessor Family Ext : 0x00
+ Coprocessor Stepping : B1
+ Board SKU : B1PRQ-5110P/5120D
+ ECC Mode : Enabled
+ SMC HW Revision : Product 225W Passive CS
+
+ Cores
+ Total No of Active Cores : 60
+ Voltage : 1032000 uV
+ Frequency : 1052631 kHz
+
+ Thermal
+ Fan Speed Control : N/A
+ Fan RPM : N/A
+ Fan PWM : N/A
+ Die Temp : 49 C
+
+ GDDR
+ GDDR Vendor : Elpida
+ GDDR Version : 0x1
+ GDDR Density : 2048 Mb
+ GDDR Size : 7936 MB
+ GDDR Technology : GDDR5
+ GDDR Speed : 5.000000 GT/s
+ GDDR Frequency : 2500000 kHz
+ GDDR Voltage : 1501000 uV
```
Offload Mode
@@ -113,16 +113,16 @@ A very basic example of code that employs offload programming technique is shown
int main(int argc, char* argv[])
{
- Â Â Â const int niter = 100000;
- Â Â Â double result = 0;
-
- Â #pragma offload target(mic)
- Â Â Â for (int i = 0; i < niter; ++i) {
- Â Â Â Â Â Â Â const double t = (i + 0.5) / niter;
- Â Â Â Â Â Â Â result += 4.0 / (t * t + 1.0);
- Â Â Â }
- Â Â Â result /= niter;
- Â Â Â std::cout << "Pi ~ " << result << 'n';
+ const int niter = 100000;
+ double result = 0;
+
+ #pragma offload target(mic)
+ for (int i = 0; i < niter; ++i) {
+ const double t = (i + 0.5) / niter;
+ result += 4.0 / (t * t + 1.0);
+ }
+ result /= niter;
+ std::cout << "Pi ~ " << result << 'n';
}
```
@@ -159,63 +159,63 @@ One way of paralelization a code for Xeon Phi is using OpenMP directives. The fo
// MIC function to add two vectors
__attribute__((target(mic))) add_mic(T *a, T *b, T *c, int size) {
- Â int i = 0;
- Â #pragma omp parallel for
- Â Â Â for (i = 0; i < size; i++)
- Â Â Â Â Â c[i] = a[i] + b[i];
+ int i = 0;
+ #pragma omp parallel for
+ for (i = 0; i < size; i++)
+ c[i] = a[i] + b[i];
}
// CPU function to add two vectors
void add_cpu (T *a, T *b, T *c, int size) {
- Â int i;
- Â for (i = 0; i < size; i++)
- Â Â Â c[i] = a[i] + b[i];
+ int i;
+ for (i = 0; i < size; i++)
+ c[i] = a[i] + b[i];
}
// CPU function to generate a vector of random numbers
void random_T (T *a, int size) {
- Â int i;
- Â for (i = 0; i < size; i++)
- Â Â Â a[i] = rand() % 10000; // random number between 0 and 9999
+ int i;
+ for (i = 0; i < size; i++)
+ a[i] = rand() % 10000; // random number between 0 and 9999
}
// CPU function to compare two vectors
int compare(T *a, T *b, T size ){
- Â int pass = 0;
- Â int i;
- Â for (i = 0; i < size; i++){
- Â Â Â if (a[i] != b[i]) {
- Â Â Â Â Â printf("Value mismatch at location %d, values %d and %dn",i, a[i], b[i]);
- Â Â Â Â Â pass = 1;
- Â Â Â }
- Â }
- Â if (pass == 0) printf ("Test passedn"); else printf ("Test Failedn");
- Â return pass;
+ int pass = 0;
+ int i;
+ for (i = 0; i < size; i++){
+ if (a[i] != b[i]) {
+ printf("Value mismatch at location %d, values %d and %dn",i, a[i], b[i]);
+ pass = 1;
+ }
+ }
+ if (pass == 0) printf ("Test passedn"); else printf ("Test Failedn");
+ return pass;
}
int main()
{
- Â int i;
- Â random_T(in1, SIZE);
- Â random_T(in2, SIZE);
+ int i;
+ random_T(in1, SIZE);
+ random_T(in2, SIZE);
- Â #pragma offload target(mic) in(in1,in2)Â inout(res)
- Â {
+ #pragma offload target(mic) in(in1,in2) inout(res)
+ {
- Â Â Â // Parallel loop from main function
- Â Â Â #pragma omp parallel for
- Â Â Â for (i=0; i<SIZE; i++)
- Â Â Â Â Â res[i] = in1[i] + in2[i];
+ // Parallel loop from main function
+ #pragma omp parallel for
+ for (i=0; i<SIZE; i++)
+ res[i] = in1[i] + in2[i];
- Â Â Â // or parallel loop is called inside the function
- Â Â Â add_mic(in1, in2, res, SIZE);
+ // or parallel loop is called inside the function
+ add_mic(in1, in2, res, SIZE);
- Â }
+ }
- Â //Check the results with CPU implementation
- Â T res_cpu[SIZE];
- Â add_cpu(in1, in2, res_cpu, SIZE);
- Â compare(res, res_cpu, SIZE);
+ //Check the results with CPU implementation
+ T res_cpu[SIZE];
+ add_cpu(in1, in2, res_cpu, SIZE);
+ compare(res, res_cpu, SIZE);
}
```
@@ -282,48 +282,48 @@ Following example show how to automatically offload an SGEMM (single precision -
int main(int argc, char **argv)
{
- Â Â Â Â Â Â Â float *A, *B, *C; /* Matrices */
+ float *A, *B, *C; /* Matrices */
- Â Â Â Â Â Â Â MKL_INT N = 2560; /* Matrix dimensions */
- Â Â Â Â Â Â Â MKL_INT LD = N; /* Leading dimension */
- Â Â Â Â Â Â Â int matrix_bytes; /* Matrix size in bytes */
- Â Â Â Â Â Â Â int matrix_elements; /* Matrix size in elements */
+ MKL_INT N = 2560; /* Matrix dimensions */
+ MKL_INT LD = N; /* Leading dimension */
+ int matrix_bytes; /* Matrix size in bytes */
+ int matrix_elements; /* Matrix size in elements */
- Â Â Â Â Â Â Â float alpha = 1.0, beta = 1.0; /* Scaling factors */
- Â Â Â Â Â Â Â char transa = 'N', transb = 'N'; /* Transposition options */
+ float alpha = 1.0, beta = 1.0; /* Scaling factors */
+ char transa = 'N', transb = 'N'; /* Transposition options */
- Â Â Â Â Â Â Â int i, j; /* Counters */
+ int i, j; /* Counters */
- Â Â Â Â Â Â Â matrix_elements = N * N;
- Â Â Â Â Â Â Â matrix_bytes = sizeof(float) * matrix_elements;
+ matrix_elements = N * N;
+ matrix_bytes = sizeof(float) * matrix_elements;
- Â Â Â Â Â Â Â /* Allocate the matrices */
- Â Â Â Â Â Â Â A = malloc(matrix_bytes); B = malloc(matrix_bytes); C = malloc(matrix_bytes);
+ /* Allocate the matrices */
+ A = malloc(matrix_bytes); B = malloc(matrix_bytes); C = malloc(matrix_bytes);
- Â Â Â Â Â Â Â /* Initialize the matrices */
- Â Â Â Â Â Â Â for (i = 0; i < matrix_elements; i++) {
- Â Â Â Â Â Â Â Â Â Â Â Â Â Â Â A[i] = 1.0; B[i] = 2.0; C[i] = 0.0;
- Â Â Â Â Â Â Â }
+ /* Initialize the matrices */
+ for (i = 0; i < matrix_elements; i++) {
+ A[i] = 1.0; B[i] = 2.0; C[i] = 0.0;
+ }
- Â Â Â Â Â Â Â printf("Computing SGEMM on the hostn");
- Â Â Â Â Â Â Â sgemm(&transa, &transb, &N, &N, &N, &alpha, A, &N, B, &N, &beta, C, &N);
+ printf("Computing SGEMM on the hostn");
+ sgemm(&transa, &transb, &N, &N, &N, &alpha, A, &N, B, &N, &beta, C, &N);
- Â Â Â Â Â Â Â printf("Enabling Automatic Offloadn");
- Â Â Â Â Â Â Â /* Alternatively, set environment variable MKL_MIC_ENABLE=1 */
- Â Â Â Â Â Â Â mkl_mic_enable();
+ printf("Enabling Automatic Offloadn");
+ /* Alternatively, set environment variable MKL_MIC_ENABLE=1 */
+ mkl_mic_enable();
- Â Â Â Â Â Â Â int ndevices = mkl_mic_get_device_count(); /* Number of MIC devices */
-        printf("Automatic Offload enabled: %d MIC devices presentn",  ndevices);
+ int ndevices = mkl_mic_get_device_count(); /* Number of MIC devices */
+ printf("Automatic Offload enabled: %d MIC devices presentn", ndevices);
- Â Â Â Â Â Â Â printf("Computing SGEMM with automatic workdivisionn");
- Â Â Â Â Â Â Â sgemm(&transa, &transb, &N, &N, &N, &alpha, A, &N, B, &N, &beta, C, &N);
+ printf("Computing SGEMM with automatic workdivisionn");
+ sgemm(&transa, &transb, &N, &N, &N, &alpha, A, &N, B, &N, &beta, C, &N);
- Â Â Â Â Â Â Â /* Free the matrix memory */
- Â Â Â Â Â Â Â free(A); free(B); free(C);
+ /* Free the matrix memory */
+ free(A); free(B); free(C);
- Â Â Â Â Â Â Â printf("Donen");
+ printf("Donen");
- Â Â Â return 0;
+ return 0;
}
```
@@ -349,10 +349,10 @@ The output of a code should look similar to following listing, where lines start
Enabling Automatic Offload
Automatic Offload enabled: 1 MIC devices present
Computing SGEMM with automatic workdivision
- [MKL] [MIC --] [AO Function]Â Â Â SGEMM
- [MKL] [MIC --] [AO SGEMM Workdivision]Â 0.00 1.00
- [MKL] [MIC 00] [AO SGEMM CPU Time]Â Â Â Â Â 0.463351 seconds
- [MKL] [MIC 00] [AO SGEMM MIC Time]Â Â Â Â Â 0.179608 seconds
+ [MKL] [MIC --] [AO Function] SGEMM
+ [MKL] [MIC --] [AO SGEMM Workdivision] 0.00 1.00
+ [MKL] [MIC 00] [AO SGEMM CPU Time] 0.463351 seconds
+ [MKL] [MIC 00] [AO SGEMM MIC Time] 0.179608 seconds
[MKL] [MIC 00] [AO SGEMM CPU->MIC Data] 52428800 bytes
[MKL] [MIC 00] [AO SGEMM MIC->CPU Data] 26214400 bytes
Done
@@ -479,23 +479,23 @@ After executing the complied binary file, following output should be displayed.
Number of available platforms: 1
Platform names:
- Â Â Â [0] Intel(R) OpenCL [Selected]
+ [0] Intel(R) OpenCL [Selected]
Number of devices available for each type:
- Â Â Â CL_DEVICE_TYPE_CPU: 1
- Â Â Â CL_DEVICE_TYPE_GPU: 0
- Â Â Â CL_DEVICE_TYPE_ACCELERATOR: 1
+ CL_DEVICE_TYPE_CPU: 1
+ CL_DEVICE_TYPE_GPU: 0
+ CL_DEVICE_TYPE_ACCELERATOR: 1
** Detailed information for each device ***
CL_DEVICE_TYPE_CPU[0]
- Â Â Â CL_DEVICE_NAME:Â Â Â Â Â Â Â Intel(R) Xeon(R) CPU E5-2470 0 @ 2.30GHz
- Â Â Â CL_DEVICE_AVAILABLE: 1
+ CL_DEVICE_NAME: Intel(R) Xeon(R) CPU E5-2470 0 @ 2.30GHz
+ CL_DEVICE_AVAILABLE: 1
...
CL_DEVICE_TYPE_ACCELERATOR[0]
- Â Â Â CL_DEVICE_NAME: Intel(R) Many Integrated Core Acceleration Card
- Â Â Â CL_DEVICE_AVAILABLE: 1
+ CL_DEVICE_NAME: Intel(R) Many Integrated Core Acceleration Card
+ CL_DEVICE_AVAILABLE: 1
...
```
@@ -579,23 +579,23 @@ An example of basic MPI version of "hello-world" example in C language, that can
#include <mpi.h>
int main (argc, argv)
- Â Â Â Â int argc;
- Â Â Â Â char *argv[];
+ int argc;
+ char *argv[];
{
- Â int rank, size;
+ int rank, size;
- Â int len;
- Â char node[MPI_MAX_PROCESSOR_NAME];
+ int len;
+ char node[MPI_MAX_PROCESSOR_NAME];
- Â MPI_Init (&argc, &argv);Â Â Â Â Â /* starts MPI */
- Â MPI_Comm_rank (MPI_COMM_WORLD, &rank);Â Â Â Â Â Â Â /* get current process id */
- Â MPI_Comm_size (MPI_COMM_WORLD, &size);Â Â Â Â Â Â Â /* get number of processes */
+ MPI_Init (&argc, &argv); /* starts MPI */
+ MPI_Comm_rank (MPI_COMM_WORLD, &rank); /* get current process id */
+ MPI_Comm_size (MPI_COMM_WORLD, &size); /* get number of processes */
- Â MPI_Get_processor_name(node,&len);
+ MPI_Get_processor_name(node,&len);
- Â printf( "Hello world from process %d of %d on host %s n", rank, size, node );
- Â MPI_Finalize();
- Â return 0;
+ printf( "Hello world from process %d of %d on host %s n", rank, size, node );
+ MPI_Finalize();
+ return 0;
}
```
@@ -722,8 +722,8 @@ The output should be again similar to:
Please note that the **"mpiexec.hydra"** requires a file the MIC filesystem. If the file is missing please contact the system administrators. A simple test to see if the file is present is to execute:
```bash
- Â Â $ ssh mic0 ls /bin/pmi_proxy
- Â /bin/pmi_proxy
+ $ ssh mic0 ls /bin/pmi_proxy
+ /bin/pmi_proxy
```
**Execution on host - MPI processes distributed over multiple accelerators on multiple nodes**
@@ -769,8 +769,8 @@ The launch the MPI program use:
```bash
$ mpiexec.hydra -genv LD_LIBRARY_PATH /apps/intel/impi/4.1.1.036/mic/lib/
-genv I_MPI_FABRICS_LIST tcp
- Â -genv I_MPI_FABRICS shm:tcp
- Â -genv I_MPI_TCP_NETMASK=10.1.0.0/16
+ -genv I_MPI_FABRICS shm:tcp
+ -genv I_MPI_TCP_NETMASK=10.1.0.0/16
-host cn204-mic0 -n 4 ~/mpi-test-mic
: -host cn205-mic0 -n 6 ~/mpi-test-mic
```
@@ -779,8 +779,8 @@ or using mpirun:
```bash
$ mpirun -genv LD_LIBRARY_PATH /apps/intel/impi/4.1.1.036/mic/lib/
-genv I_MPI_FABRICS_LIST tcp
- Â -genv I_MPI_FABRICS shm:tcp
- Â -genv I_MPI_TCP_NETMASK=10.1.0.0/16
+ -genv I_MPI_FABRICS shm:tcp
+ -genv I_MPI_TCP_NETMASK=10.1.0.0/16
-host cn204-mic0 -n 4 ~/mpi-test-mic
: -host cn205-mic0 -n 6 ~/mpi-test-mic
```
@@ -805,8 +805,8 @@ The same way MPI program can be executed on multiple hosts:
```bash
$ mpiexec.hydra -genv LD_LIBRARY_PATH /apps/intel/impi/4.1.1.036/mic/lib/
-genv I_MPI_FABRICS_LIST tcp
- Â -genv I_MPI_FABRICS shm:tcp
- Â -genv I_MPI_TCP_NETMASK=10.1.0.0/16
+ -genv I_MPI_FABRICS shm:tcp
+ -genv I_MPI_TCP_NETMASK=10.1.0.0/16
-host cn204 -n 4 ~/mpi-test
: -host cn205 -n 6 ~/mpi-test
```
@@ -822,7 +822,7 @@ In the previous section we have compiled two binary files, one for hosts "**mpi-
$ mpiexec.hydra
-genv I_MPI_FABRICS_LIST tcp
-genv I_MPI_FABRICS shm:tcp
- Â -genv I_MPI_TCP_NETMASK=10.1.0.0/16
+ -genv I_MPI_TCP_NETMASK=10.1.0.0/16
-genv LD_LIBRARY_PATH /apps/intel/impi/4.1.1.036/mic/lib/
-host cn205 -n 2 ~/mpi-test
: -host cn205-mic0 -n 2 ~/mpi-test-mic
@@ -851,7 +851,7 @@ An example of a machine file that uses 2 >hosts (**cn205** and **cn206**) and 2
cn206-mic0:2
```
-In addition if a naming convention is set in a way that the name of the binary for host is **"bin_name"** and the name of the binary for the accelerator is **"bin_name-mic"** then by setting up the environment variable **I_MPI_MIC_POSTFIX** to **"-mic"** user do not have to specify the names of booth binaries. In this case mpirun needs just the name of the host binary file (i.e. "mpi-test") and uses the suffix to get a name of the binary for accelerator (i..e. "mpi-test-mic").
+In addition if a naming convention is set in a way that the name of the binary for host is **"bin_name"** and the name of the binary for the accelerator is **"bin_name-mic"** then by setting up the environment variable **I_MPI_MIC_POSTFIX** to **"-mic"** user do not have to specify the names of booth binaries. In this case mpirun needs just the name of the host binary file (i.e. "mpi-test") and uses the suffix to get a name of the binary for accelerator (i..e. "mpi-test-mic").
```bash
$ export I_MPI_MIC_POSTFIX=-mic
@@ -864,8 +864,8 @@ To run the MPI code using mpirun and the machine file "hosts_file_mix" use:
-genv I_MPI_FABRICS shm:tcp
-genv LD_LIBRARY_PATH /apps/intel/impi/4.1.1.036/mic/lib/
-genv I_MPI_FABRICS_LIST tcp
- Â -genv I_MPI_FABRICS shm:tcp
- Â -genv I_MPI_TCP_NETMASK=10.1.0.0/16
+ -genv I_MPI_FABRICS shm:tcp
+ -genv I_MPI_TCP_NETMASK=10.1.0.0/16
-machinefile hosts_file_mix
~/mpi-test
```
@@ -901,4 +901,4 @@ Please note each host or accelerator is listed only per files. User has to speci
Optimization
------------
-For more details about optimization techniques please read Intel document [Optimization and Performance Tuning for Intel® Xeon Phi™ Coprocessors](http://software.intel.com/en-us/articles/optimization-and-performance-tuning-for-intel-xeon-phi-coprocessors-part-1-optimization "http://software.intel.com/en-us/articles/optimization-and-performance-tuning-for-intel-xeon-phi-coprocessors-part-1-optimization")
+For more details about optimization techniques please read Intel document [Optimization and Performance Tuning for Intel® Xeon Phi™ Coprocessors](http://software.intel.com/en-us/articles/optimization-and-performance-tuning-for-intel-xeon-phi-coprocessors-part-1-optimization "http://software.intel.com/en-us/articles/optimization-and-performance-tuning-for-intel-xeon-phi-coprocessors-part-1-optimization")
diff --git a/docs.it4i/colors.md b/docs.it4i/colors.md
new file mode 100644
index 0000000000000000000000000000000000000000..568ebd2e4d42ff5ab4514224e469a30c1d07cc6f
--- /dev/null
+++ b/docs.it4i/colors.md
@@ -0,0 +1,62 @@
+## Primary colors
+
+Click on a tile to change the primary color of the theme:
+
+<button data-md-color-primary="red">Red</button>
+<button data-md-color-primary="pink">Pink</button>
+<button data-md-color-primary="purple">Purple</button>
+<button data-md-color-primary="deep-purple">Deep Purple</button>
+<button data-md-color-primary="indigo">Indigo</button>
+<button data-md-color-primary="blue">Blue</button>
+<button data-md-color-primary="light-blue">Light Blue</button>
+<button data-md-color-primary="cyan">Cyan</button>
+<button data-md-color-primary="teal">Teal</button>
+<button data-md-color-primary="green">Green</button>
+<button data-md-color-primary="light-green">Light Green</button>
+<button data-md-color-primary="lime">Lime</button>
+<button data-md-color-primary="yellow">Yellow</button>
+<button data-md-color-primary="amber">Amber</button>
+<button data-md-color-primary="orange">Orange</button>
+<button data-md-color-primary="deep-orange">Deep Orange</button>
+<button data-md-color-primary="brown">Brown</button>
+<button data-md-color-primary="grey">Grey</button>
+<button data-md-color-primary="blue-grey">Blue Grey</button>
+
+<script>
+ var buttons = document.querySelectorAll("button[data-md-color-primary]");
+ Array.prototype.forEach.call(buttons, function(button) {
+ button.addEventListener("click", function() {
+ document.body.dataset.mdColorPrimary = this.dataset.mdColorPrimary;
+ })
+ })
+</script>
+
+## Accent colors
+
+Click on a tile to change the accent color of the theme:
+
+<button data-md-color-accent="red">Red</button>
+<button data-md-color-accent="pink">Pink</button>
+<button data-md-color-accent="purple">Purple</button>
+<button data-md-color-accent="deep-purple">Deep Purple</button>
+<button data-md-color-accent="indigo">Indigo</button>
+<button data-md-color-accent="blue">Blue</button>
+<button data-md-color-accent="light-blue">Light Blue</button>
+<button data-md-color-accent="cyan">Cyan</button>
+<button data-md-color-accent="teal">Teal</button>
+<button data-md-color-accent="green">Green</button>
+<button data-md-color-accent="light-green">Light Green</button>
+<button data-md-color-accent="lime">Lime</button>
+<button data-md-color-accent="yellow">Yellow</button>
+<button data-md-color-accent="amber">Amber</button>
+<button data-md-color-accent="orange">Orange</button>
+<button data-md-color-accent="deep-orange">Deep Orange</button>
+
+<script>
+ var buttons = document.querySelectorAll("button[data-md-color-accent]");
+ Array.prototype.forEach.call(buttons, function(button) {
+ button.addEventListener("click", function() {
+ document.body.dataset.mdColorAccent = this.dataset.mdColorAccent;
+ })
+ })
+</script>
diff --git a/docs.it4i/modules-anselm.md b/docs.it4i/modules-anselm.md
index 0228c7703745e279211ac599ee4fec88caee8f0e..b4f8e8406a6296a71e2f533018f3bf38ccd04eda 100644
--- a/docs.it4i/modules-anselm.md
+++ b/docs.it4i/modules-anselm.md
@@ -1,3 +1,371 @@
-| Name | Version |
-| ---- | ------: |
-| modulename | 1.0.1 |
\ No newline at end of file
+# List of Available Modules
+
+## Core
+
+|Module|Description|Available versions|
+|--|--|--|
+|**lmod**| |<nobr>7.2.2.lua</nobr>|
+|**settarg**| |<nobr>7.2.2.lua</nobr>|
+
+## All
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[almost](http://www-almost.ch.cam.ac.uk/site)**|all atom molecular simulation toolkit - is a fast and flexible molecular modeling environment that provides powerful and efficient algorithms for molecular simulation, homology modeling, de novo design and ab-initio calculations.|<nobr>2.1.0-foss-2015g</br>2.1.0-foss-2016a</nobr>|
+|**[Amber](http://ambermd.org)**|A set of molecular mechanical force fields for the simulation of biomolecules|<nobr>14</nobr>|
+|**[APR](http://apr.apache.org/)**|Apache Portable Runtime (APR) libraries.|<nobr>1.5.2-foss-2015g</br>1.5.2</nobr>|
+|**[APR-util](http://apr.apache.org/)**|Apache Portable Runtime (APR) util libraries.|<nobr>1.5.4</br>1.5.4-foss-2015g</nobr>|
+|**[Armadillo](http://arma.sourceforge.net/)**|Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions.|<nobr>7.500.0-foss-2016a-Python-3.5.2</nobr>|
+|**[arpack-ng](http://forge.scilab.org/index.php/p/arpack-ng/)**|ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.|<nobr>3.3.0-foss-2016a</nobr>|
+|**[ATLAS](http://math-atlas.sourceforge.net)**|ATLAS (Automatically Tuned Linear Algebra Software) is the application of the AEOS (Automated Empirical Optimization of Software) paradigm, with the present emphasis on the Basic Linear Algebra Subprograms (BLAS), a widely used, performance-critical, linear algebra kernel library.|<nobr>3.10.1-GCC-4.9.3-2.25-LAPACK-3.4.2</nobr>|
+|**[Autoconf](http://www.gnu.org/software/autoconf/)**|Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls.|<nobr>2.69</br>2.69-GNU-4.9.3-2.25</br>2.69-intel-2015b</br>2.69-intel-2017.00</br>2.69-foss-2016a</br>2.69-GNU-5.1.0-2.25</nobr>|
+|**[Automake](http://www.gnu.org/software/automake/automake.html)**|Automake: GNU Standards-compliant Makefile generator|<nobr>1.15-GNU-5.1.0-2.25</br>1.15-foss-2016a</br>1.15-GNU-4.9.3-2.25</br>1.15-intel-2015b</br>1.15</br>1.15-intel-2017.00</nobr>|
+|**[Autotools](http://autotools.io)**|This bundle collect the standard GNU build tools: Autoconf, Automake and libtool|<nobr>20150215-GNU-4.9.3-2.25</br>20150215-intel-2017.00</br>20150215-GNU-5.1.0-2.25</br>20150215-intel-2015b</br>20150215-foss-2016a</br>20150215</nobr>|
+|**[Bash](http://www.gnu.org/software/bash)**|Bash is an sh-compatible command language interpreter that executes commands read from the standard input or from a file. Bash also incorporates useful features from the Korn and C shells (ksh and csh).|<nobr>4.3</nobr>|
+|**[binutils](http://directory.fsf.org/project/binutils/)**|binutils: GNU binary utilities|<nobr>2.25</br>2.26-GCCcore-5.4.0</br>2.26</br>2.25-GCC-5.1.0-binutils-2.25</br>2.25-GCCcore-4.9.3</br>2.26-GCCcore-5.3.0</br>2.25-GCC-4.9.3</br>2.25-GCC-4.9.3-binutils-2.25</nobr>|
+|**[Bison](http://www.gnu.org/software/bison)**|Bison is a general-purpose parser generator that converts an annotated context-free grammar into a deterministic LR or generalized LR (GLR) parser employing LALR(1) parser tables.|<nobr>3.0.4-foss-2016a</br>3.0.4-GCC-4.9.3</br>3.0.4</br>2.7-foss-2015g</br>3.0.2</br>3.0.4-GCCcore-5.4.0</br>2.7</br>3.0.4-intel-2015b</br>2.5-intel-2015b</br>3.0.4-GCC-4.9.3-binutils-2.25</br>3.0.4-GCC-5.1.0-binutils-2.25</br>3.0.4-GCCcore-4.9.3</br>3.0.4-GCCcore-5.3.0</nobr>|
+|**[Boost](http://www.boost.org/)**|Boost provides free peer-reviewed portable C++ source libraries.|<nobr>1.58.0-foss-2015g-Python-2.7.9</br>1.60.0-intel-2016a</br>1.59.0-intel-2015b</br>1.60.0-foss-2015g-Python-2.7.9</br>1.61.0-foss-2016a-serial</br>1.60.0-foss-2015g-Python-2.7.9.lua</nobr>|
+|**[byacc](http://invisible-island.net/byacc/byacc.html)**|Berkeley Yacc (byacc) is generally conceded to be the best yacc variant available. In contrast to bison, it is written to avoid dependencies upon a particular compiler.|<nobr>20150711-intel-2015b</br>20120526</br>20120526-foss-2016a</br>20120526-foss-2015g</br>20120526-intel-2015b</nobr>|
+|**[bzip2](http://www.bzip.org/)**|bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression.|<nobr>1.0.6-intel-2017.00</br>1.0.6-intel-2016.01</br>1.0.6</br>1.0.6-foss-2016a</br>1.0.6-intel-2016a</br>1.0.6-intel-2015b</br>.1.0.6-foss-2015g.lua</br>1.0.6-foss-2015g</nobr>|
+|**[cairo](http://cairographics.org)**|Cairo is a 2D graphics library with support for multiple output devices. Currently supported output targets include the X Window System (via both Xlib and XCB), Quartz, Win32, image buffers, PostScript, PDF, and SVG file output. Experimental backends include OpenGL, BeOS, OS/2, and DirectFB|<nobr>1.12.18</nobr>|
+|**[CMake](http://www.cmake.org)**|CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software.|<nobr>3.5.2-intel-2016a</br>3.6.2.lua</br>3.4.1-foss-2016a</br>3.5.2-foss-2016a</br>3.3.1-GCC-4.9.3-2.25</br>3.4.1-intel-2015b</br>3.3.1-foss-2016a</br>3.3.1-foss-2015g</br>3.5.2</nobr>|
+|**[CUDA](https://developer.nvidia.com/cuda-toolkit)**|CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs.|<nobr>7.5.18</nobr>|
+|**[cURL](http://curl.haxx.se)**|libcurl is a free and easy-to-use client-side URL transfer library, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMTP, SMTPS, Telnet and TFTP. libcurl supports SSL certificates, HTTP POST, HTTP PUT, FTP uploading, HTTP form based upload, proxies, cookies, user+password authentication (Basic, Digest, NTLM, Negotiate, Kerberos), file transfer resume, http proxy tunneling and more.|<nobr>7.51.0</br>7.37.1-foss-2015g</br>7.37.1</nobr>|
+|**[Doxygen](http://www.doxygen.org)**|Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D.|<nobr>1.8.11</nobr>|
+|**[EasyBuild](http://hpcugent.github.com/easybuild/)**|EasyBuild is a software build and installation framework written in Python that allows you to install software in a structured, repeatable and robust way.|<nobr>2.6.0</br>2.8.1</br>3.0.0</br>2.7.0</br>3.0.2.lua</br>2.8.0</nobr>|
+|**[expat](http://expat.sourceforge.net/)**|Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags)|<nobr>2.1.0-foss-2015g</br>2.1.0</nobr>|
+|**[ffmpeg](https://www.ffmpeg.org/)**|A complete, cross-platform solution to record, convert and stream audio and video.|<nobr>2.4</nobr>|
+|**[FFTW](http://www.fftw.org)**|FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data.|<nobr>3.3.4-intel-2015b</br>3.3.4-gompi-2016.04</br>3.3.4-gompi-2016a</br>3.3.5-intel-2017.00</br>3.3.4-gompi-2015g</nobr>|
+|**[fixesproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X.org FixesProto protocol headers.|<nobr>5.0</nobr>|
+|**[flex](http://flex.sourceforge.net/)**|Flex (Fast Lexical Analyzer) is a tool for generating scanners. A scanner, sometimes called a tokenizer, is a program which recognizes lexical patterns in text.|<nobr>2.5.39-foss-2015g</br>2.5.39-GCC-5.1.0-binutils-2.25</br>2.6.0</br>2.5.39-GCC-4.9.3-binutils-2.25</br>2.5.39-GCC-4.9.3</br>2.6.0-GCCcore-5.3.0</br>2.5.35-intel-2015b</br>2.6.0-GCCcore-5.4.0</br>2.5.39</br>2.5.39-foss-2016a</br>2.5.39-GCCcore-4.9.3</br>2.5.39-intel-2015b</nobr>|
+|**[FLTK](http://www.fltk.org)**|FLTK is a cross-platform C++ GUI toolkit for UNIX/Linux (X11), Microsoft Windows, and MacOS X. FLTK provides modern GUI functionality without the bloat and supports 3D graphics via OpenGL and its built-in GLUT emulation.|<nobr>1.3.2</nobr>|
+|**[fontconfig](http://www.freedesktop.org/software/fontconfig)**|Fontconfig is a library designed to provide system-wide font configuration, customization and application access.|<nobr>2.11.1</nobr>|
+|**[fontsproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 font extension wire protocol|<nobr>2.1.3</nobr>|
+|**[Forge](http://www.allinea.com/products/develop-allinea-forge)**|Allinea Forge is the complete toolsuite for software development - with everything needed to debug, profile, optimize, edit and build C, C++ and FORTRAN applications on Linux for high performance - from single threads through to complex parallel HPC codes with MPI, OpenMP, threads or CUDA.|<nobr>6.0.6</br>5.7</br>6.1.2.lua</br>6.0.5</br>5.1-43967</nobr>|
+|**[foss]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.|<nobr>2016a</br>2016.04</br>2015g</nobr>|
+|**[freetype](http://freetype.org)**|FreeType 2 is a software font engine that is designed to be small, efficient, highly customizable, and portable while capable of producing high-quality output (glyph images). It can be used in graphics libraries, display servers, font conversion tools, text image generation tools, and many other products as well.|<nobr>2.5.3</nobr>|
+|**[GCC](http://gcc.gnu.org/)**|The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).|<nobr>4.9.3-binutils-2.25</br>5.1.0-binutils-2.25</br>5.3.0-2.26</br>4.9.3</br>4.9.3-2.25</br>5.3.0-binutils-2.25</nobr>|
+|**[GCCcore](http://gcc.gnu.org/)**|The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).|<nobr>5.3.0</br>4.9.3</br>5.4.0</nobr>|
+|**[GDAL](http://www.gdal.org/)**|GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. As a library, it presents a single abstract data model to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for data translation and processing.|<nobr>2.1.0-foss-2015g</br>1.9.2-foss-2015g</nobr>|
+|**gettext**| |<nobr>.0.19.2.lua</br>0.19.6-intel-2017.00</br>0.19.6-foss-2016a</br>0.19.4.lua</br>0.19.2</br>0.19.2-foss-2015g</nobr>|
+|**[gimkl]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, next to Intel MPI and Intel MKL (BLAS, (Sca)LAPACK, FFTW).|<nobr>2.11.5</nobr>|
+|**[gimpi]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, next to Intel MPI.|<nobr>2.11.5</nobr>|
+|**git**| |<nobr>2.11.0-GNU-4.9.3-2.25.lua</br>2.8.0-GNU-4.9.3-2.25</nobr>|
+|**[GLib](http://www.gtk.org/)**|GLib is one of the base libraries of the GTK+ project|<nobr>2.40.0</nobr>|
+|**[GMP](http://gmplib.org/)**|GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers.|<nobr>6.1.0-intel-2015b</br>5.0.5</br>6.1.0-foss-2016a</br>6.0.0a</br>6.0.0a-intel-2015b</br>6.1.0-intel-2017.00</br>5.0.5-foss-2015g</nobr>|
+|**[GNU](http://www.gnu.org/software/)**|Compiler-only toolchain with GCC and binutils.|<nobr>4.9.3-2.25</br>5.1.0-2.25</nobr>|
+|**[gompi]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support.|<nobr>2016a</br>2016.04</br>2015g</nobr>|
+|**[GROMACS](http://www.gromacs.org)**|GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.|<nobr>5.1.2-intel-2015b-hybrid-single-cuda</br>5.1.2-intel-2016a-hybrid</br>5.1.2-intel-2015b-hybrid-single-CUDA-7.5-PLUMED-2.2.1</br>5.1.2-intel-2015b-hybrid-single-CUDA-7.5-PLUMED-2.2.1-test</nobr>|
+|**[GSL](http://www.gnu.org/software/gsl/)**|The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting.|<nobr>2.1-intel-2015b</br>1.16-intel-2015b</br>1.16-intel-2016.01</nobr>|
+|**[guile](http://www.gnu.org/software/guile)**|Guile is the GNU Ubiquitous Intelligent Language for Extensions, the official extension language for the GNU operating system.|<nobr>1.8.8</br>1.8.8-intel-2015b</br>1.8.8-foss-2016a</nobr>|
+|**[gzip](http://www.gnu.org/software/gzip/)**|gzip (GNU zip) is a popular data compression program as a replacement for compress|<nobr>1.6-foss-2015g</br>1.6</br>1.6-foss-2016a</br>1.6-intel-2015b</nobr>|
+|**[HDF5](http://www.hdfgroup.org/HDF5/)**|HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.|<nobr>1.8.16-foss-2016a</br>1.8.16-intel-2016.01</br>1.8.16-intel-2015b</nobr>|
+|**[hwloc](http://www.open-mpi.org/projects/hwloc/)**|The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information as well as the locality of I/O devices such as network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently.|<nobr>1.11.0</br>1.11.3-GCC-5.3.0-2.26</br>1.11.1-iccifort-2015.3.187-GNU-4.9.3-2.25</br>1.11.0-GNU-4.9.3-2.25</br>1.11.2-GCC-4.9.3-2.25</br>1.11.0-GNU-5.1.0-2.25</nobr>|
+|**[icc](http://software.intel.com/en-us/intel-compilers/)**|C and C++ compiler from Intel|<nobr>2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-GCC-5.4.0-2.26</br>2016.1.150-GCC-4.9.3-2.25</br>2015.3.187-GNU-4.9.3-2.25</nobr>|
+|**[iccifort](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel C, C++ and Fortran compilers|<nobr>2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-GCC-5.4.0-2.26</br>2016.1.150-GCC-4.9.3-2.25</br>2015.3.187-GNU-4.9.3-2.25</nobr>|
+|**[ifort](http://software.intel.com/en-us/intel-compilers/)**|Fortran compiler from Intel|<nobr>2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-GCC-5.4.0-2.26</br>2016.1.150-GCC-4.9.3-2.25</br>2015.3.187-GNU-4.9.3-2.25</nobr>|
+|**[iimpi](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel C/C++ and Fortran compilers, alongside Intel MPI.|<nobr>8.1.5-GCC-4.9.3-2.25</br>7.3.5-GNU-5.1.0-2.25</br>2017.00-GCC-5.4.0-2.26</br>2016.01-GCC-4.9.3-2.25</nobr>|
+|**[imkl](http://software.intel.com/en-us/intel-mkl/)**|Intel Math Kernel Library is a library of highly optimized, extensively threaded math routines for science, engineering, and financial applications that require maximum performance. Core math functions include BLAS, LAPACK, ScaLAPACK, Sparse Solvers, Fast Fourier Transforms, Vector Math, and more.|<nobr>11.2.3.187-gimpi-2.11.5</br>11.3.1.150-iimpi-2016.01-GCC-4.9.3-2.25</br>2017.0.098-iimpi-2017.00-GCC-5.4.0-2.26</br>11.2.3.187-iimpi-7.3.5-GNU-5.1.0-2.25</br>11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25</nobr>|
+|**[impi](http://software.intel.com/en-us/intel-mpi-library/)**|The Intel(R) MPI Library for Linux* OS is a multi-fabric message passing library based on ANL MPICH2 and OSU MVAPICH2. The Intel MPI Library for Linux OS implements the Message Passing Interface, version 2 (MPI-2) specification.|<nobr>2017.0.098-iccifort-2017.0.098-GCC-5.4.0-2.26</br>5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25</br>5.0.3.048-iccifort-2015.3.187-GNU-5.1.0-2.25</br>5.0.3.048-GCC-4.9.3</nobr>|
+|**[inputproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X.org InputProto protocol headers.|<nobr>2.3</nobr>|
+|**[intel](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL.|<nobr>2017.00</br>2015b</br>2016.01</br>2016a</nobr>|
+|**[ISL](http://isl.gforge.inria.fr/)**|isl is a library for manipulating sets and relations of integer points bounded by linear constraints.|<nobr>0.15</nobr>|
+|**[Java](http://java.com/)**|Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.|<nobr>1.8.0_51</br>1.7.0_79.lua</br>1.7.0_79</nobr>|
+|**[JOE](http://joe-editor.sourceforge.net)**|JOE is a full featured terminal-based screen editor which is distributed under the GNU General Public License (GPL)|<nobr>4.2</nobr>|
+|**[kbproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X.org KBProto protocol headers.|<nobr>1.0.6</nobr>|
+|**[libdrm](http://dri.freedesktop.org)**|Direct Rendering Manager runtime library.|<nobr>2.4.27</nobr>|
+|**[libffi](http://sourceware.org/libffi/)**|The libffi library provides a portable, high level programming interface to various calling conventions. This allows a programmer to call any function specified by a call interface description at run-time.|<nobr>3.2.1-foss-2016a</br>3.0.13</br>3.1-intel-2015b</br>3.0.13-intel-2015b</br>3.1-intel-2016.01</nobr>|
+|**[libfontenc](http://www.freedesktop.org/wiki/Software/xlibs/)**|X11 font encoding library|<nobr>1.1.3</nobr>|
+|**[libgdiplus](https://github.com/mono/libgdiplus)**|An Open Source implementation of the GDI+ API.|<nobr>3.12</nobr>|
+|**[libICE](http://www.freedesktop.org/wiki/Software/xlibs)**|X Inter-Client Exchange library for freedesktop.org|<nobr>1.0.9</nobr>|
+|**[libjpeg-turbo](http://sourceforge.net/projects/libjpeg-turbo/)**|libjpeg-turbo is a fork of the original IJG libjpeg which uses SIMD to accelerate baseline JPEG compression and decompression. libjpeg is a library that implements JPEG image encoding, decoding and transcoding.|<nobr>1.4.0</nobr>|
+|**[libmatheval](http://www.gnu.org/software/libmatheval/)**|GNU libmatheval is a library (callable from C and Fortran) to parse and evaluate symbolic expressions input as text.|<nobr>1.1.8</br>1.1.8-foss-2016a</br>1.1.8-intel-2015b</br>1.1.11-intel-2015b</nobr>|
+|**[libpciaccess](http://cgit.freedesktop.org/xorg/lib/libpciaccess/)**|Generic PCI access library.|<nobr>0.13.1</nobr>|
+|**[libpng](http://www.libpng.org/pub/png/libpng.html)**|libpng is the official PNG reference library|<nobr>1.6.12</nobr>|
+|**[libpthread-stubs](http://xcb.freedesktop.org/)**|The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility.|<nobr>0.3</nobr>|
+|**[libreadline](http://cnswww.cns.cwru.edu/php/chet/readline/rltop.html)**|The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands.|<nobr>.6.3</br>6.3-intel-2016.01</br>6.3-foss-2015g</br>6.3-foss-2016a</br>6.3-intel-2017.00</br>6.3-gimkl-2.11.5</br>6.3-intel-2015b</br>6.3</nobr>|
+|**[libSM](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 Session Management library, which allows for applications to both manage sessions, and make use of session managers to save and restore their state for later use.|<nobr>1.2.2</nobr>|
+|**[LibTIFF](http://www.remotesensing.org/libtiff/)**|tiff: Library and tools for reading and writing TIFF data files|<nobr>4.0.3</nobr>|
+|**[libtool](http://www.gnu.org/software/libtool)**|GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface.|<nobr>2.4.2</br>2.4.6-foss-2016a</br>2.4.2-foss-2015g</br>2.4.6-intel-2017.00</br>2.4.6-intel-2015b</br>2.4.6-GNU-5.1.0-2.25</br>2.4.6</br>2.4.6-GNU-4.9.3-2.25</nobr>|
+|**[libunistring](http://www.gnu.org/software/libunistring/)**|This library provides functions for manipulating Unicode strings and for manipulating C strings according to the Unicode standard.|<nobr>0.9.3</br>0.9.3-foss-2016a</br>0.9.3-intel-2015b</nobr>|
+|**[libX11](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 client-side library|<nobr>1.6.2-Python-2.7.9</nobr>|
+|**[libXau](http://www.freedesktop.org/wiki/Software/xlibs)**|The libXau package contains a library implementing the X11 Authorization Protocol. This is useful for restricting client access to the display.|<nobr>1.0.8</nobr>|
+|**[libxcb](http://xcb.freedesktop.org/)**|The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility.|<nobr>1.11-Python-2.7.9</nobr>|
+|**[libXdmcp](http://www.freedesktop.org/wiki/Software/xlibs)**|The libXdmcp package contains a library implementing the X Display Manager Control Protocol. This is useful for allowing clients to interact with the X Display Manager.|<nobr>1.1.2</nobr>|
+|**[libXext](http://www.freedesktop.org/wiki/Software/xlibs)**|Common X Extensions library|<nobr>1.3.3</nobr>|
+|**[libXfixes](http://www.freedesktop.org/wiki/Software/xlibs)**|X Fixes extension library|<nobr>5.0.1</nobr>|
+|**[libXfont](http://www.freedesktop.org/wiki/Software/xlibs)**|X font libary|<nobr>1.5.1-Python-2.7.9</nobr>|
+|**[libxml2](http://xmlsoft.org/)**|Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform).|<nobr>2.9.3-intel-2016a</br>2.9.3-foss-2016a</br>2.9.2-intel-2015b</nobr>|
+|**[libXt](http://www.freedesktop.org/wiki/Software/xlibs)**|libXt provides the X Toolkit Intrinsics, an abstract widget library upon which other toolkits are based. Xt is the basis for many toolkits, including the Athena widgets (Xaw), and LessTif (a Motif implementation).|<nobr>1.1.4-libX11-1.6.2</nobr>|
+|**Lmod**| |<nobr>7.2.2.lua</br>7.0.6</br>6.4.2</nobr>|
+|**[Lua](http://www.lua.org/)**|Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping.|<nobr>.5.1.4-8</br>5.1.4-8.lua</nobr>|
+|**[M4](http://www.gnu.org/software/m4/m4.html)**|GNU M4 is an implementation of the traditional Unix macro processor. It is mostly SVR4 compatible although it has some extensions (for example, handling more than 9 positional parameters to macros). GNU M4 also has built-in functions for including files, running shell commands, doing arithmetic, etc.|<nobr>1.4.17</br>1.4.17-GCCcore-5.3.0</br>1.4.17-GCC-4.9.3</br>1.4.17-GCC-4.9.3-binutils-2.25</br>1.4.17-GCCcore-5.4.0</br>1.4.17-foss-2016a</br>1.4.16-intel-2015b</br>1.4.17-GNU-4.9.3-2.25</br>1.4.17-GCCcore-4.9.3</br>1.4.17-GNU-5.1.0-2.25</br>1.4.17-intel-2015b</br>1.4.17-intel-2017.00</br>1.4.17-GCC-5.1.0-binutils-2.25</nobr>|
+|**[make](http://www.gnu.org/software/make/make.html)**|make-3.82: GNU version of make utility|<nobr>3.82</nobr>|
+|**[makedepend](http://www.linuxfromscratch.org/blfs/view/svn/x/makedepend.html)**|The makedepend package contains a C-preprocessor like utility to determine build-time dependencies.|<nobr>1.0.4</nobr>|
+|**MATLAB**| |<nobr>2015b-EDU</br>2015a-EDU</br>2015b-COM</br>2015a-COM</nobr>|
+|**Maven**| |<nobr>3.3.9.lua</br>3.3.9</nobr>|
+|**[Mercurial](http://mercurial.selenic.com/)**|Mercurial is a free, distributed source control management tool. It efficiently handles projects of any size and offers an easy and intuitive interface.|<nobr>3.7.3-foss-2015g-Python-2.7.9</nobr>|
+|**[MLD2P4](http://www.mld2p4.it)**|MLD2P4 (Multi-Level Domain Decomposition Parallel Preconditioners Package based on PSBLAS) is a package of parallel algebraic multi-level preconditioners. It implements various versions of one-level additive and of multi-level additive and hybrid Schwarz algorithms. In the multi-level case, a purely algebraic approach is applied to generate coarse-level corrections, so that no geometric background is needed concerning the matrix to be preconditioned. The matrix is assumed to be square, real or complex, with a symmetric sparsity pattern.|<nobr>2.0-rc4-GCC-4.9.3-2.25</nobr>|
+|**[MPICH](http://www.mpich.org/)**|MPICH v3.x is an open source high-performance MPI 3.0 implementation. It does not support InfiniBand (use MVAPICH2 with InfiniBand devices).|<nobr>3.2-GCC-4.9.3-2.25</nobr>|
+|**[NASM](http://www.nasm.us/)**|NASM: General-purpose x86 assembler|<nobr>2.11.05</nobr>|
+|**[ncurses](http://www.gnu.org/software/ncurses/)**|The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses.|<nobr>5.9-intel-2016.01</br>5.9-intel-2015b</br>.6.0</br>5.9-gimkl-2.11.5</br>6.0-foss-2016a</br>5.9-foss-2015g</br>5.9</br>.6.0-intel-2016a.lua</br>5.9-GCC-4.9.3-2.25</br>6.0-intel-2016a</br>6.0-intel-2017.00</br>6.0</br>5.9-GNU-4.9.3-2.25</nobr>|
+|**[numactl](http://oss.sgi.com/projects/libnuma/)**|The numactl program allows you to run your application program on specific cpu's and memory nodes. It does this by supplying a NUMA memory policy to the operating system before running your program. The libnuma library provides convenient ways for you to add NUMA memory policies into your own program.|<nobr>2.0.10-GNU-5.1.0-2.25</br>2.0.11-GCC-5.3.0-2.26</br>2.0.11-GCC-4.9.3-2.25</br>2.0.10-iccifort-2015.3.187-GNU-4.9.3-2.25</br>2.0.11</br>2.0.10-GNU-4.9.3-2.25</br>2.0.10</nobr>|
+|**[numpy](http://www.numpy.org)**|NumPy is the fundamental package for scientific computing with Python. It contains among other things: a powerful N-dimensional array object, sophisticated (broadcasting) functions, tools for integrating C/C++ and Fortran code, useful linear algebra, Fourier transform, and random number capabilities. Besides its obvious scientific uses, NumPy can also be used as an efficient multi-dimensional container of generic data. Arbitrary data-types can be defined. This allows NumPy to seamlessly and speedily integrate with a wide variety of databases.|<nobr>1.8.2-intel-2015b-Python-2.7.9</br>1.8.2-intel-2015b-Python-2.7.11</br>1.8.2-intel-2016.01-Python-2.7.9</nobr>|
+|**[Octave](http://www.gnu.org/software/octave/)**|GNU Octave is a high-level interpreted language, primarily intended for numerical computations.|<nobr>3.8.2-gimkl-2.11.5</br>4.0.0-foss-2015g</br>4.0.1-gimkl-2.11.5</nobr>|
+|**[OPARI2](http://www.score-p.org)**|OPARI2, the successor of Forschungszentrum Juelich's OPARI, is a source-to-source instrumentation tool for OpenMP and hybrid codes. It surrounds OpenMP directives and runtime library calls with calls to the POMP2 measurement interface.|<nobr>2.0</nobr>|
+|**[OpenBLAS](http://xianyi.github.com/OpenBLAS/)**|OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.|<nobr>0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0</br>0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0</br>0.2.15-GCC-5.1.0-binutils-2.25-LAPACK-3.6.0-gompi-2016a</br>0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0</br>0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0</br>0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0</nobr>|
+|**[OpenMPI](http://www.open-mpi.org/)**|The Open MPI Project is an open source MPI-2 implementation.|<nobr>1.10.2-GCC-5.3.0-2.26</br>1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25</br>1.8.8-GNU-4.9.3-2.25</br>1.10.2-GCC-4.9.3-2.25</nobr>|
+|**[ORCA](http://cec.mpg.de/forum/)**|ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules. It features a wide variety of standard quantum chemical methods ranging from semiempirical methods to DFT to single- and multireference correlated ab initio methods. It can also treat environmental and relativistic effects.|<nobr>3_0_3-linux_x86-64</nobr>|
+|**[OTF2](http://www.score-p.org)**|The Open Trace Format 2 is a highly scalable, memory efficient event trace data format plus support library. It is the new standard trace format for Scalasca, Vampir, and TAU and is open for other tools.|<nobr>2.0</nobr>|
+|**[PAPI](http://icl.cs.utk.edu/projects/papi/)**|PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors. PAPI enables software engineers to see, in near real time, the relation between software performance and processor events. In addition Component PAPI provides access to a collection of components that expose performance measurement opportunites across the hardware and software stack.|<nobr>5.4.3</nobr>|
+|**[PCRE](http://www.pcre.org/)**|The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.|<nobr>8.37</br>8.37-intel-2016.01</br>8.37-gimkl-2.11.5</br>8.37-foss-2015g</nobr>|
+|**[PerformanceReports](http://www.allinea.com/products/allinea-performance-reports)**|Allinea Performance Reports are the most effective way to characterize and understand the performance of HPC application runs. One single-page HTML report elegantly answers a range of vital questions for any HPC site. - Is this application well-optimized for the system and the processors it is running on? - Does it benefit from running at this scale? - Are there I/O, networking or threading bottlenecks affecting performance? - Which hardware, software or configuration changes can we make to improve performance further. - How much energy did this application use?|<nobr>6.0.6</nobr>|
+|**Perl**| |<nobr>5.24.0-GCC-4.9.3-2.25-bare.lua</br>5.20.2-GNU-4.9.3-2.25-bare</nobr>|
+|**[pixman](http://www.pixman.org/)**|Pixman is a low-level software library for pixel manipulation, providing features such as image compositing and trapezoid rasterization. Important users of pixman are the cairo graphics library and the X server.|<nobr>0.32.6</nobr>|
+|**[pkg-config](http://www.freedesktop.org/wiki/Software/pkg-config/)**|pkg-config is a helper tool used when compiling applications and libraries. It helps you insert the correct compiler options on the command line so an application can use gcc -o test test.c `pkg-config --libs --cflags glib-2.0` for instance, rather than hard-coding values on where to find glib (or other libraries).|<nobr>0.27.1</br>0.27.1-intel-2015b</br>0.29-foss-2016a</nobr>|
+|**[PLUMED](http://www.plumed-code.org)**|PLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines. Free energy calculations can be performed as a function of many order parameters with a particular focus on biological problems, using state of the art methods such as metadynamics, umbrella sampling and Jarzynski-equation based steered MD. The software, written in C++, can be easily interfaced with both fortran and C/C++ codes.|<nobr>2.2.1-intel-2015b</br>2.3b-foss-2016a</nobr>|
+|**[PSBLAS](http://people.uniroma2.it/salvatore.filippone/psblas/)**|Most computationally intensive applications work on irregular and sparse domains that complicate their implementation on parallel machines. The major goal of the Parallel Sparse Basic Linear Algebra Subroutines (PSBLAS) project is to provide a framework to enable easy, efficient and portable implementations of iterative solvers for linear systems, while shielding the user from most details of their parallelization. The interface is designed keeping in view a Single Program Multiple Data programming model on distributed memory machines.|<nobr>3.3.4-3-GCC-4.9.3-2.25</nobr>|
+|**[PSBLAS-ext](http://people.uniroma2.it/salvatore.filippone/psblas/)**|PSBLAS - Extended formats and NVIDIA GPU support|<nobr>1.0-4-GCC-4.9.3-2.25</nobr>|
+|**[Python](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>3.5.2-foss-2016a</br>2.7.9-intel-2015b</br>2.7.9-foss-2015g</br>2.7.9-intel-2016.01</br>3.5.2-intel-2017.00</br>2.7.11-intel-2015b</br>2.7.9</nobr>|
+|**[Qt](http://qt-project.org/)**|Qt is a comprehensive cross-platform C++ application framework.|<nobr>4.8.6</nobr>|
+|**[QuantumESPRESSO](http://www.pwscf.org/)**|Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft).|<nobr>5.4.0-intel-2017.00</nobr>|
+|**[renderproto](http://www.freedesktop.org/wiki/Software/xlibs)**|Xrender protocol and ancillary headers|<nobr>0.11</nobr>|
+|**[Ruby](https://www.ruby-lang.org)**|Ruby is a dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write.|<nobr>2.3.1</nobr>|
+|**[ScaLAPACK](http://www.netlib.org/scalapack/)**|The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers.|<nobr>2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2016.04-OpenBLAS-0.2.18-LAPACK-3.6.0</br>2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0</nobr>|
+|**[ScientificPython](https://sourcesup.cru.fr/projects/scientific-py/)**|ScientificPython is a collection of Python modules for scientific computing. It contains support for geometry, mathematical functions, statistics, physical units, IO, visualization, and parallelization.|<nobr>2.9.4-intel-2016.01-Python-2.7.9</br>2.9.4-intel-2015b-Python-2.7.9</br>2.9.4-intel-2015b-Python-2.7.11</nobr>|
+|**[SCons](http://www.scons.org/)**|SCons is a software construction tool.|<nobr>2.3.6-foss-2015g-Python-2.7.9</nobr>|
+|**[Serf](http://serf.apache.org/)**|The serf library is a high performance C-based HTTP client library built upon the Apache Portable Runtime (APR) library|<nobr>1.3.8-foss-2015g</nobr>|
+|**[SIONlib](http://www.fz-juelich.de/ias/jsc/EN/Expertise/Support/Software/SIONlib/_node.html)**|SIONlib is a scalable I/O library for parallel access to task-local files. The library not only supports writing and reading binary data to or from several thousands of processors into a single or a small number of physical files, but also provides global open and close functions to access SIONlib files in parallel. This package provides a stripped-down installation of SIONlib for use with performance tools (e.g., Score-P), with renamed symbols to avoid conflicts when an application using SIONlib itself is linked against a tool requiring a different SIONlib version.|<nobr>1.6.1-tools</nobr>|
+|**[spGPU](https://github.com/davidebarbieri/spgpu)**|spGPU is a set of custom matrix storages and CUDA kernels for sparse linear algebra computing on GPU. It isn't a replacement for cuBLAS/cuSPARSE that should be used for a full featured linear algebra environment on GPU.|<nobr>master-GCC-4.9.3-2.25</nobr>|
+|**[SQLite](http://www.sqlite.org/)**|SQLite: SQL Database Engine in a C Library|<nobr>3.8.8.1-intel-2015b</br>3.8.8.1-foss-2015g</br>3.8.8.1-foss-2016a</br>3.9.2-intel-2017.00</br>3.8.8.1</br>3.9.2-intel-2015b</br>3.8.8.1-intel-2016.01</br>3.9.2-foss-2016a</nobr>|
+|**[Subversion](http://subversion.apache.org/)**|Subversion is an open source version control system.|<nobr>1.8.16-foss-2015g</nobr>|
+|**[Szip](http://www.hdfgroup.org/doc_resource/SZIP/)**|Szip compression software, providing lossless compression of scientific data|<nobr>2.1-intel-2015b</br>2.1-intel-2016.01</br>2.1-foss-2016a</br>2.1</nobr>|
+|**tbb**| |<nobr>4.4.2.152.lua</br>4.4.2.152</nobr>|
+|**[Tcl](http://www.tcl.tk/)**|Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more.|<nobr>8.6.4</br>8.6.4-intel-2017.00</br>8.6.3-intel-2016.01</br>8.6.3-foss-2016a</br>8.6.3-intel-2015b</br>8.6.4-foss-2016a</br>8.6.4-intel-2015b</br>8.6.3</br>8.6.3-foss-2015g</br>8.5.12</nobr>|
+|**[tcsh](http://www.tcsh.org)**|Tcsh is an enhanced, but completely compatible version of the Berkeley UNIX C shell (csh). It is a command language interpreter usable both as an interactive login shell and a shell script command processor. It includes a command-line editor, programmable word completion, spelling correction, a history mechanism, job control and a C-like syntax.|<nobr>6.19.00</nobr>|
+|**[Tk](http://www.tcl.tk/)**|Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages.|<nobr>8.6.4-foss-2016a-no-X11</br>8.6.4-intel-2017.00-no-X11</br>8.6.4-intel-2015b-no-X11</br>8.6.4-no-X11</br>8.5.12</nobr>|
+|**[util-linux](http://www.kernel.org/pub/linux/utils/util-linux)**|Set of Linux utilities|<nobr>2.26.1</br>2.28-intel-2016a.lua</nobr>|
+|**[Vampir](http://www.vampir.eu)**|The Vampir software tool provides an easy-to-use framework that enables developers to quickly display and analyze arbitrary program behavior at any level of detail. The tool suite implements optimized event analysis algorithms and customizable displays that enable fast and interactive rendering of very complex performance monitoring data.|<nobr>8.5.0</nobr>|
+|**VASP**| |<nobr>5.4.1-intel-2015b-24Jun15</br>5.4.1-intel-2017.00-24Jun15</nobr>|
+|**[VTune](http://software.intel.com/en-us/intel-vtune-amplifier-xe)**|Intel VTune Amplifier XE 2016 is the premier performance profiler for C, C++, C#, Fortran, Assembly and Java.|<nobr>2016_update1</nobr>|
+|**[xbitmaps](http://www.freedesktop.org/wiki/Software/xlibs)**|provides bitmaps for x|<nobr>1.1.1</nobr>|
+|**[xcb-proto](http://xcb.freedesktop.org/)**|The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility.|<nobr>1.11-Python-2.7.9</nobr>|
+|**[xdrfile](http://www.gromacs.org/Developer_Zone/Programming_Guide/XTC_Library)**|XTC library|<nobr>1.1.4-foss-2016a</br>1.1.4-foss-2015g</br>1.1.4-intel-2015b</nobr>|
+|**[xextproto](http://www.freedesktop.org/wiki/Software/xlibs)**|XExtProto protocol headers.|<nobr>7.3.0</nobr>|
+|**[xineramaproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X protocol and ancillary headers for xinerama|<nobr>1.2.1</nobr>|
+|**[xorg-macros](http://cgit.freedesktop.org/xorg/util/macros)**|X.org macros utilities.|<nobr>1.17</nobr>|
+|**[xproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X protocol and ancillary headers|<nobr>7.0.26</nobr>|
+|**[xtrans](http://www.freedesktop.org/wiki/Software/xlibs)**|xtrans includes a number of routines to make X implementations transport-independent; at time of writing, it includes support for UNIX sockets, IPv4, IPv6, and DECnet.|<nobr>1.3.5</br>1.3.4</nobr>|
+|**[XZ](http://tukaani.org/xz/)**|xz: XZ utilities|<nobr>5.2.2-foss-2016a</br>5.2.2-intel-2017.00</br>5.2.2.lua</nobr>|
+|**zlib**| |<nobr>.1.2.8-foss-2015g.lua</br>1.2.8-intel-2015b</br>1.2.8-GCC-5.1.0-binutils-2.25</br>1.2.8-foss-2016a</br>1.2.8-intel-2017.00</br>1.2.8-GCC-4.9.3-binutils-2.25</br>1.2.8-GCCcore-4.9.3</br>1.2.8-foss-2015g</br>1.2.8</br>1.2.8-intel-2016a</br>1.2.8-intel-2016.01</br>1.2.8-GCC-4.9.3</br>1.2.8-GCCcore-5.3.0</br>1.2.8-GCCcore-5.4.0</nobr>|
+
+## Bio
+
+|Module|Description|Available versions|
+|--|--|--|
+|**bowtie2**| |<nobr>2.2.3</nobr>|
+
+## Bullxde
+
+|Module|Description|Available versions|
+|--|--|--|
+|**bullxde**| |<nobr>2.0</nobr>|
+
+## Bullxmpi
+
+|Module|Description|Available versions|
+|--|--|--|
+|**bullxmpi**| |<nobr>bullxmpi-1.2.4.3</nobr>|
+
+## Chem
+
+|Module|Description|Available versions|
+|--|--|--|
+|**abinit**| |<nobr>7.10.1-icc-impi</br>7.10.1-gcc-openmpi</br>7.6.2</nobr>|
+|**cp2k-mpi**| |<nobr>2.5.1-gcc</nobr>|
+|**lammps**| |<nobr>28Jun14</nobr>|
+|**molpro**| |<nobr>2010.1-p45-intel</nobr>|
+|**namd**| |<nobr>2.8</nobr>|
+|**nwchem**| |<nobr>6.1.1</br>6.3-rev2-patch1-openmpi</br>6.3-rev2-patch1-venus</br>6.3-rev2-patch1</nobr>|
+
+## Compilers
+
+|Module|Description|Available versions|
+|--|--|--|
+|**bupc**| |<nobr>2.16.2</nobr>|
+|**chicken**| |<nobr>4.8.0.6</nobr>|
+|**gcc**| |<nobr>4.9.0</br>5.4.0</br>4.8.1</nobr>|
+|**gupc**| |<nobr>4.8.0.3</nobr>|
+|**intel**| |<nobr>13.5.192</br>15.3.187</br>14.0.1</br>15.2.164</nobr>|
+|**java**| |<nobr>1.7</nobr>|
+|**llvm**| |<nobr>3.6.0</nobr>|
+
+## Engineering
+
+|Module|Description|Available versions|
+|--|--|--|
+|**adams**| |<nobr>2013.2</nobr>|
+|**ansys**| |<nobr>15.0.x</br>16.0.x</br>14.5.x</nobr>|
+|**beopest**| |<nobr>12.0.1</br>13.3</br>12.2</nobr>|
+|**blender**| |<nobr>2.71</nobr>|
+|**Code_Saturne**| |<nobr>3.0.5</nobr>|
+|**comsol**| |<nobr>43b-EDU</br>44-EDU</br>50-EDU</br>50-COM</br>44-COM</br>43b-COM</nobr>|
+|**digimat**| |<nobr>5.0.1</nobr>|
+|**Discovery_Studio**| |<nobr>4.0</nobr>|
+|**dytran**| |<nobr>2013.0.1</nobr>|
+|**fds**| |<nobr>5.5.3</br>6.svn</br>5.5.3-omp</nobr>|
+|**hypermesh**| |<nobr>12.0.110</nobr>|
+|**hyperworks**| |<nobr>13.0</nobr>|
+|**lsdyna**| |<nobr>7.x.x</nobr>|
+|**lsprepost**| |<nobr>4.2</nobr>|
+|**lux**| |<nobr>1.3.1</nobr>|
+|**marc**| |<nobr>2011</br>2013.1</nobr>|
+|**matlab**| |<nobr>R2014a-COM</br>R2013a-COM</br>R2013a-EDU</br>R2014a-EDU</nobr>|
+|**maxwell**| |<nobr>3.0</nobr>|
+|**modflow-2005**| |<nobr>1.11.00</nobr>|
+|**modflow-nwt**| |<nobr>1.0.9-aquaveo</br>1.0.9</nobr>|
+|**nastran**| |<nobr>2013.1.1</nobr>|
+|**openfoam**| |<nobr>2.2.1-icc-openmpi1.6.5-DP</br>2.2.1-gcc481-openmpi1.6.5-SP</br>2.2.1-gcc481-openmpi1.6.5-DP</br>2.2.2-icc-openmpi1.8.1-DP</br>2.2.1-icc-impi4.1.1.036-DP</nobr>|
+|**paraview**| |<nobr>4.0.1-gcc481-bullxmpi1.2.4.1-osmesa10.0</nobr>|
+|**pest**| |<nobr>13.0</nobr>|
+|**wien2k**| |<nobr>13.1</br>14.2</nobr>|
+
+## Environments
+
+|Module|Description|Available versions|
+|--|--|--|
+|**bullxde**| |<nobr>2.0</nobr>|
+|**PrgEnv-gnu**| |<nobr>4.4.6</br>4.4.6-test</br>4.8.1</nobr>|
+|**PrgEnv-intel**| |<nobr>15.0.3</br>13.5.192</br>14.0.1</nobr>|
+
+## Libraries
+
+|Module|Description|Available versions|
+|--|--|--|
+|**adios**| |<nobr>1.8.0</nobr>|
+|**boost**| |<nobr>1.56-icc-impi</br>1.56-gcc-openmpi</nobr>|
+|**dataspaces**| |<nobr>1.4.0</nobr>|
+|**fftw2**| |<nobr>2.1.5-icc</br>2.1.5-gcc</nobr>|
+|**fftw2-mpi**| |<nobr>2.1.5-icc</br>2.1.5-gcc</nobr>|
+|**fftw3**| |<nobr>3.3.3-gcc</br>3.3.3-icc</nobr>|
+|**fftw3-mpi**| |<nobr>3.3.3-gcc</br>3.3.3-icc</nobr>|
+|**gpi2**| |<nobr>1.0.2</br>1.1.1</br>1.1.0</nobr>|
+|**gsl**| |<nobr>1.16-icc</br>1.16-gcc</nobr>|
+|**hdf5**| |<nobr>1.8.13</br>1.8.11</nobr>|
+|**hdf5-parallel**| |<nobr>1.8.11-gcc</br>1.8.13-gcc</br>1.8.13</br>1.8.13-gcc49</br>1.8.11</nobr>|
+|**ipp**| |<nobr>13.5.192</br>15.3.187</br>14.0.1</br>15.2.164</nobr>|
+|**libmesh**| |<nobr>0.9.3-petsc-3.4.4-icc-impi-mkl-dbg</br>0.9.3-petsc-3.4.4-icc-impi-mkl-dbg-2d</br>0.9.3-petsc-3.4.4-icc-impi-mkl-opt</nobr>|
+|**magma**| |<nobr>.common-mic</br>1.3.0-mic</br>1.1.0-mic</nobr>|
+|**mkl**| |<nobr>13.5.192</br>15.3.187</br>14.0.1</br>15.2.164</nobr>|
+|**mxml**| |<nobr>2.9</nobr>|
+|**netcdf**| |<nobr>4.2.1.1</br>4.3.0</nobr>|
+|**netcdf-cxx**| |<nobr>4.2</nobr>|
+|**netcdf-fortran**| |<nobr>4.2</nobr>|
+|**netcdf-parallel**| |<nobr>4.3.0</nobr>|
+|**opencl-rt**| |<nobr>4.5.0.8</nobr>|
+|**opencl-sdk**| |<nobr>4.6.0.92</nobr>|
+|**petsc**| |<nobr>3.5.3-icc15-impi-mkl-threads-dbg</br>3.5.3-icc15-impi-mkl-threads-opt</br>3.7.3-icc16-impi5-mkl-dbg</br>3.5.3-icc15-impi-mkl-opt</br>3.7.3-icc16-impi5-mkl-opt</br>3.5.3-icc15-impi-mkl-dbg</br>.common_help</br>.common_petsc_pre</br>.common_petsc_post</br>.common_functions</nobr>|
+|**plasma**| |<nobr>2.6.0</nobr>|
+|**slepc**| |<nobr>3.7.2-icc16-impi5-mkl-opt</br>3.7.2-icc16-impi5-mkl-dbg</br>3.4.4-icc15-impi-mkl-opt</br>3.4.4-icc15-impi-mkl-dbg</nobr>|
+|**szip**| |<nobr>2.1</nobr>|
+|**tbb**| |<nobr>13.5.192</br>15.3.187</br>14.0.1</br>15.2.164</nobr>|
+|**trilinos**| |<nobr>11.2.3-gcc-openmpi-mkl-dbg</br>11.2.3-icc</br>11.2.3-gcc-openmpi-mkl-opt</nobr>|
+|**zlib**| |<nobr>1.2.5</br>1.2.8</nobr>|
+
+## Mpi
+
+|Module|Description|Available versions|
+|--|--|--|
+|**bullxmpi**| |<nobr>bullxmpi_1.2.4.1</nobr>|
+|**impi**| |<nobr>5.0.3.048</br>4.1.1.036</nobr>|
+|**lam**| |<nobr>7.1.4-icc</nobr>|
+|**mvapich2**| |<nobr>1.9-gcc46</br>1.9-icc</br>1.9-gcc</nobr>|
+|**openmpi**| |<nobr>1.8.1-gcc46</br>1.8.1-gcc49</br>1.6.5-gcc</br>1.8.1-gcc</br>1.6.5-icc</br>1.6.5-gcc46</br>1.8.1-icc</nobr>|
+
+## Nvidia
+
+|Module|Description|Available versions|
+|--|--|--|
+|**cuda**| |<nobr>7.5</br>6.5.14</br>6.0.37</nobr>|
+
+## Omics
+
+|Module|Description|Available versions|
+|--|--|--|
+|**fastqc**| |<nobr>0.11.2</nobr>|
+|**gatk**| |<nobr>2.6-4</br>.2.6-4.swp</nobr>|
+|**hpg-aligner**| |<nobr>1.0.0</nobr>|
+|**hpg-fastq**| |<nobr>1.0.0</nobr>|
+|**hpg-variant**| |<nobr>1.0.0</nobr>|
+|**ngsPipeline**| |<nobr>.1.0.0.swp</br>1.0.0</nobr>|
+|**picard**| |<nobr>1.117</nobr>|
+|**samtools**| |<nobr>0.1.19</nobr>|
+|**snpEff**| |<nobr>3.6</nobr>|
+
+## Oscar-Modules
+
+|Module|Description|Available versions|
+|--|--|--|
+|**oscar-modules**| |<nobr>1.0.3</nobr>|
+
+## Prace
+
+|Module|Description|Available versions|
+|--|--|--|
+|**GLOBUS**| |<nobr>globus</nobr>|
+|**PRACE**| |<nobr>prace</nobr>|
+
+## Tools
+
+|Module|Description|Available versions|
+|--|--|--|
+|**advisor_xe**| |<nobr>2013.5</br>2015.1.10.380555</nobr>|
+|**cmake**| |<nobr>2.8.11</br>2.8.11-mic</nobr>|
+|**cube**| |<nobr>4.2.3-gcc</br>4.2.3-icc</nobr>|
+|**dhi-mike**| |<nobr>2016-SP2</br>2014</br>2016</br>default</nobr>|
+|**elmer**| |<nobr>7.0-r6695-dbg</br>7.0-r6695-opt</nobr>|
+|**gnuplot**| |<nobr>4.6.5</nobr>|
+|**grace**| |<nobr>5.1.23</nobr>|
+|**inspector_xe**| |<nobr>2015.1.2.379161</br>2013.5</nobr>|
+|**intelpcm**| |<nobr>2.6</nobr>|
+|**ipm**| |<nobr>0.983-icc-impi</nobr>|
+|**itac**| |<nobr>8.1.4.045</br>9.0.3.051</nobr>|
+|**likwid**| |<nobr>3.1.2-gcc</br>3.1.1-mic</br>3.1.2-icc</br>3.1.1-icc</br>3.1.2-mic</nobr>|
+|**memoryscape**| |<nobr>3.4</nobr>|
+|**mercurial**| |<nobr>2.9.1</nobr>|
+|**MIKE**| |<nobr>2016-SP2</br>2014</br>2016</br>default</nobr>|
+|**mono**| |<nobr>3.12.1</br>3.2.3</nobr>|
+|**mpi.net**| |<nobr>1.0.0-mono-3.12.1</br>1.0.0-impi</br>1.0.0</nobr>|
+|**numactl**| |<nobr>2.0.9</nobr>|
+|**octave**| |<nobr>.hg-20130730</br>.3.6.4</nobr>|
+|**opari2**| |<nobr>1.1.2-gcc</br>1.1.2-icc</nobr>|
+|**openssh-x509**| |<nobr>6.2p2</nobr>|
+|**oscar-modules**| |<nobr>1.0.3</nobr>|
+|**otf2**| |<nobr>1.4-icc</br>1.2.1-gcc</br>1.4-gcc</br>1.2.1-icc</nobr>|
+|**papi**| |<nobr>5.4.0-mic</br>5.3.0</br>5.3.2-mic</br>5.4.0</br>5.3.2</nobr>|
+|**parallel**| |<nobr>20141122</nobr>|
+|**python**| |<nobr>2.7.6</br>2.7.5</br>3.3.2</br>3.3.5</br>3.4.2</nobr>|
+|**R**| |<nobr>3.1.1</br>.old.3.0.1</br>3.0.1</nobr>|
+|**racket**| |<nobr>6.0.1</nobr>|
+|**relion**| |<nobr>1.3</br>1.2</nobr>|
+|**Rstudio**| |<nobr>0.97</nobr>|
+|**ruby**| |<nobr>2.0.0-p247</nobr>|
+|**scalasca2**| |<nobr>2.0-icc-impi</br>2.0-gcc-openmpi</nobr>|
+|**scite**| |<nobr>3.4.3</nobr>|
+|**scorep**| |<nobr>1.2.3-gcc-openmpi</br>1.2.3-icc-impi</nobr>|
+|**tcl**| |<nobr>8.5.15</nobr>|
+|**tk**| |<nobr>8.5.15</nobr>|
+|**totalview**| |<nobr>8.13</br>8.12</nobr>|
+|**turbovnc**| |<nobr>1.2.2</nobr>|
+|**valgrind**| |<nobr>3.9.0-impi</nobr>|
+|**vampir**| |<nobr>8.2</nobr>|
+|**virtualgl**| |<nobr>2.4</nobr>|
+|**vtune_xe**| |<nobr>2013.15</br>2015.3.0.403110</nobr>|
+
+## Virtualization
+
+|Module|Description|Available versions|
+|--|--|--|
+|**qemu**| |<nobr>2.1.2-vde2</br>2.1.2</br>2.1.0</br>2.1.0-vde2</nobr>|
+|**vde2**| |<nobr>2.3.2</nobr>|
+|**wine**| |<nobr>1.7.29</nobr>|
diff --git a/docs.it4i/modules-salomon-uv.md b/docs.it4i/modules-salomon-uv.md
index 3553cf37ac250455380087e155174d5298647c15..480df9881ffddd5046a6b2b0bf1e98e4866fd7a4 100644
--- a/docs.it4i/modules-salomon-uv.md
+++ b/docs.it4i/modules-salomon-uv.md
@@ -1,3 +1,165 @@
-| Name | Version |
-| ---- | ------: |
-| modulename | 3.0.3 |
+# List of Available UV Modules
+
+## Bio
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[FastQC](http://www.bioinformatics.babraham.ac.uk/projects/download.html)**|A quality control application for high throughput sequence data|<nobr>0.11.3</nobr>|
+|**[GATK](http://www.broadinstitute.org/gatk/)**|The Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyse next-generation resequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance. Its robust architecture, powerful processing engine and high-performance computing features make it capable of taking on projects of any size.|<nobr>2.6-5-Java-1.7.0_79</nobr>|
+|**[SnpEff](http://snpeff.sourceforge.net/)**|Genetic variant annotation and effect prediction toolbox.|<nobr>4.1_G</nobr>|
+
+## Cae
+
+|Module|Description|Available versions|
+|--|--|--|
+|**ANSYS**| |<nobr>16.1</br>17.0</nobr>|
+|**[OpenFOAM](http://www.openfoam.com/)**|OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics.|<nobr>2.2.2-intel-2015b</br>2.3.0-intel-2015b</nobr>|
+
+## Chem
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[ABINIT](http://www.abinit.org/)**|Abinit is a plane wave pseudopotential code for doing condensed phase electronic structure calculations using DFT.|<nobr>7.10.1-foss-2015b</br>7.10.1-intel-2015b</nobr>|
+|**[Libint](https://sourceforge.net/p/libint/)**|Libint library is used to evaluate the traditional (electron repulsion) and certain novel two-body matrix elements (integrals) over Cartesian Gaussian functions used in modern atomic and molecular theory.|<nobr>1.1.4-intel-2015b</nobr>|
+|**[libxc](http://www.tddft.org/programs/octopus/wiki/index.php/Libxc)**|Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals.|<nobr>2.2.1-intel-2015b</nobr>|
+
+## Compiler
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[GCC](http://gcc.gnu.org/)**|The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).|<nobr>4.9.3-binutils-2.25</br>5.1.0-binutils-2.25</br>4.4.7-system</br>4.9.3</br>6.2.0-2.27.lua</br>4.9.3-2.25.lua</nobr>|
+|**GCCcore**| |<nobr>5.4.0.lua</br>6.2.0.lua</br>4.9.3.lua</nobr>|
+|**[icc](http://software.intel.com/en-us/intel-compilers/)**|C and C++ compiler from Intel|<nobr>2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-GCC-5.4.0-2.26.lua</nobr>|
+|**[ifort](http://software.intel.com/en-us/intel-compilers/)**|Fortran compiler from Intel|<nobr>2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-GCC-5.4.0-2.26.lua</nobr>|
+|**LLVM**| |<nobr>3.9.0-intel-2017.00.lua</br>3.8.0-foss-2016a.lua</nobr>|
+
+## Data
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[GDAL](http://www.gdal.org/)**|GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. As a library, it presents a single abstract data model to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for data translation and processing.|<nobr>2.0.1-foss-2015b</nobr>|
+|**[HDF5](http://www.hdfgroup.org/HDF5/)**|HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.|<nobr>1.8.13-intel-2015b</br>1.8.16-intel-2015b</br>1.8.15-patch1-foss-2015b</br>1.8.16-foss-2016a.lua</nobr>|
+|**[netCDF](http://www.unidata.ucar.edu/software/netcdf/)**|NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.|<nobr>4.3.2-intel-2015b</br>4.3.3.1-foss-2015b</nobr>|
+
+## Devel
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Autoconf](http://www.gnu.org/software/autoconf/)**|Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls.|<nobr>2.69-GNU-4.9.3-2.25</br>2.69-GNU-5.1.0-2.25</br>2.69.lua</br>2.69-intel-2017.00.lua</br>2.69-foss-2016a.lua</nobr>|
+|**[Automake](http://www.gnu.org/software/automake/automake.html)**|Automake: GNU Standards-compliant Makefile generator|<nobr>1.15-GNU-4.9.3-2.25</br>1.15-GNU-5.1.0-2.25</br>1.15.lua</br>1.15-intel-2017.00.lua</br>1.15-foss-2016a.lua</nobr>|
+|**[Autotools](http://autotools.io)**|This bundle collect the standard GNU build tools: Autoconf, Automake and libtool|<nobr>20150215-GNU-4.9.3-2.25</br>20150215-GNU-5.1.0-2.25</br>20150215.lua</br>20150215-intel-2017.00.lua</br>20150215-foss-2016a.lua</nobr>|
+|**[Boost](http://www.boost.org/)**|Boost provides free peer-reviewed portable C++ source libraries.|<nobr>1.58.0-intel-2015b-Python-2.7.9</br>1.60.0-foss-2015g-Python-2.7.9.lua</nobr>|
+|**[CMake](http://www.cmake.org)**|CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software.|<nobr>3.0.0-intel-2015b</br>3.4.1-foss-2015b</br>3.6.2.lua</br>3.5.2-foss-2016a.lua</br>3.6.2-intel-2017.00.lua</nobr>|
+|**[Doxygen](http://www.doxygen.org)**|Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D.|<nobr>1.8.7-intel-2015b</br>1.8.10-foss-2015b</nobr>|
+|**[M4](http://www.gnu.org/software/m4/m4.html)**|GNU M4 is an implementation of the traditional Unix macro processor. It is mostly SVR4 compatible although it has some extensions (for example, handling more than 9 positional parameters to macros). GNU M4 also has built-in functions for including files, running shell commands, doing arithmetic, etc.|<nobr>1.4.17-GCC-4.9.3-binutils-2.25</br>1.4.17-GNU-4.9.3-2.25</br>1.4.17</br>1.4.17-GNU-5.1.0-2.25</br>1.4.17-intel-2015b</br>1.4.17-foss-2015b</br>1.4.17-GCCcore-5.4.0.lua</br>1.4.17-GCCcore-6.2.0.lua</br>1.4.17-intel-2017.00.lua</br>1.4.17-GCCcore-4.9.3.lua</br>1.4.17-foss-2016a.lua</nobr>|
+|**[make](http://www.gnu.org/software/make/make.html)**|make-3.82: GNU version of make utility|<nobr>3.82-intel-2015b</nobr>|
+|**[Maven](http://maven.apache.org/index.html)**|Binary maven install, Apache Maven is a software project management and comprehension tool. Based on the concept of a project object model (POM), Maven can manage a project's build, reporting and documentation from a central piece of information.|<nobr>3.3.9</nobr>|
+|**[ncurses](http://www.gnu.org/software/ncurses/)**|The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses.|<nobr>5.9-intel-2015b</br>5.9-foss-2015g</br>5.9-foss-2015b</br>6.0.lua</br>6.0</br>6.0-intel-2017.00.lua</br>6.0-foss-2016a.lua</nobr>|
+|**[SQLite](http://www.sqlite.org/)**|SQLite: SQL Database Engine in a C Library|<nobr>3.8.8.1-foss-2015g</br>3.8.8.1-intel-2015b</br>3.8.8.1-foss-2015b</br>3.9.2-intel-2017.00.lua</br>3.9.2-foss-2016a.lua</nobr>|
+
+## Lang
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Bison](http://www.gnu.org/software/bison)**|Bison is a general-purpose parser generator that converts an annotated context-free grammar into a deterministic LR or generalized LR (GLR) parser employing LALR(1) parser tables.|<nobr>3.0.4-GCC-4.9.3-binutils-2.25</br>3.0.2-intel-2015b</br>3.0.4-foss-2015b</br>3.0.4.lua</br>3.0.4-GCCcore-5.4.0.lua</br>3.0.4-GCCcore-6.2.0.lua</br>3.0.4-GCCcore-4.9.3.lua</nobr>|
+|**[flex](http://flex.sourceforge.net/)**|Flex (Fast Lexical Analyzer) is a tool for generating scanners. A scanner, sometimes called a tokenizer, is a program which recognizes lexical patterns in text.|<nobr>2.5.39-GCC-4.9.3-binutils-2.25</br>2.5.39-intel-2015b</br>2.5.37-intel-2015b</br>2.5.39-foss-2015b</br>2.6.0.lua</br>2.6.0-GCCcore-5.4.0.lua</br>2.6.0-GCCcore-6.2.0.lua</br>2.5.39-GCCcore-4.9.3.lua</nobr>|
+|**[Java](http://java.com/)**|Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.|<nobr>1.8.0_51</br>1.7.0_79</br>1.8.0_72</nobr>|
+|**[Lua](http://www.lua.org/)**|Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping.|<nobr>5.1.4-8</nobr>|
+|**[NASM](http://www.nasm.us/)**|NASM: General-purpose x86 assembler|<nobr>2.11.08-foss-2015b</nobr>|
+|**[Perl](http://www.perl.org/)**|Larry Wall's Practical Extraction and Report Language|<nobr>5.16.3-intel-2015b</br>5.22.2-intel-2017.00.lua</nobr>|
+|**[Python](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>2.7.9-intel-2015b</br>2.7.9-foss-2015g</br>2.7.9-foss-2015b</br>3.5.2-intel-2017.00.lua</br>3.5.2-foss-2016a.lua</br>2.7.11-foss-2016a.lua</nobr>|
+|**[R](http://www.r-project.org/)**|R is a free software environment for statistical computing and graphics.|<nobr>3.1.1-intel-2015b</br>3.2.3-foss-2015b</nobr>|
+|**[Tcl](http://www.tcl.tk/)**|Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more.|<nobr>8.5.12-intel-2015b</br>8.6.3-foss-2015g</br>8.6.3-intel-2015b</br>8.6.3-foss-2015b</br>8.6.4-foss-2015b</br>8.6.4-intel-2017.00.lua</br>8.6.4-foss-2016a.lua</nobr>|
+
+## Lib
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[libffi](http://sourceware.org/libffi/)**|The libffi library provides a portable, high level programming interface to various calling conventions. This allows a programmer to call any function specified by a call interface description at run-time.|<nobr>3.1-intel-2015b</br>3.0.13-foss-2015b</br>3.2.1-GCC-4.4.7-system</nobr>|
+|**[libjpeg-turbo](http://sourceforge.net/libjpeg-turbo/)**|libjpeg-turbo is a fork of the original IJG libjpeg which uses SIMD to accelerate baseline JPEG compression and decompression. libjpeg is a library that implements JPEG image encoding, decoding and transcoding.|<nobr>1.4.1-foss-2015b</nobr>|
+|**[libpng](http://www.libpng.org/pub/png/libpng.html)**|libpng is the official PNG reference library|<nobr>1.6.9-intel-2015b</br>1.6.17-foss-2015b</nobr>|
+|**[libreadline](http://cnswww.cns.cwru.edu/php/chet/readline/rltop.html)**|The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands.|<nobr>6.3-foss-2015g</br>6.3-intel-2015b</br>6.2-intel-2015b</br>6.3-foss-2015b</br>6.3</br>6.3-intel-2017.00.lua</br>6.3-foss-2016a.lua</nobr>|
+|**[libtool](http://www.gnu.org/software/libtool)**|GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface.|<nobr>2.4.6-GNU-4.9.3-2.25</br>2.4.6-GNU-5.1.0-2.25</br>2.4.6.lua</br>2.4.6-intel-2017.00.lua</br>2.4.6-foss-2016a.lua</nobr>|
+|**[libxml2](http://xmlsoft.org/)**|Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform).|<nobr>2.9.2-GCC-4.4.7-system</br>2.9.2-foss-2015b</br>2.9.3-intel-2017.00.lua</nobr>|
+|**[PROJ](http://trac.osgeo.org/proj/)**|Program proj is a standard Unix filter function which converts geographic longitude and latitude coordinates into cartesian coordinates|<nobr>4.8.0-foss-2015b</nobr>|
+|**[tbb](http://software.intel.com/en-us/articles/intel-tbb/)**|Intel Threading Building Blocks 4.0 (Intel TBB) is a widely used, award-winning C++ template library for creating reliable, portable, and scalable parallel applications. Use Intel TBB for a simple and rapid way of developing robust task-based parallel applications that scale to available processor cores, are compatible with multiple environments, and are easier to maintain. Intel TBB is the most proficient way to implement future-proof parallel applications that tap into the power and performance of multicore and manycore hardware platforms.|<nobr>4.4.2.152</nobr>|
+|**[zlib](http://www.zlib.net/)**|zlib is designed to be a free, general-purpose, legally unencumbered -- that is, not covered by any patents -- lossless data-compression library for use on virtually any computer hardware and operating system.|<nobr>1.2.8-GCC-4.9.3-binutils-2.25</br>1.2.8</br>1.2.8-GCC-5.1.0-binutils-2.25</br>1.2.8-intel-2015b</br>1.2.8-foss-2015g</br>1.2.7-intel-2015b</br>1.2.8-foss-2015b</br>1.2.8-GCC-4.4.7-system</br>1.2.8.lua</br>1.2.8-GCCcore-5.4.0.lua</br>1.2.8-GCCcore-6.2.0.lua</br>1.2.8-intel-2017.00.lua</br>1.2.8-GCCcore-4.9.3.lua</br>1.2.8-foss-2016a.lua</nobr>|
+
+## Math
+
+|Module|Description|Available versions|
+|--|--|--|
+|**GMP**| |<nobr>6.1.0-intel-2017.00.lua</br>6.1.0-foss-2016a.lua</nobr>|
+|**[SCOTCH](http://gforge.inria.fr/projects/scotch/)**|Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning.|<nobr>6.0.3-intel-2015b</br>6.0.0_esmumps-intel-2015b</nobr>|
+
+## Mpi
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[impi](http://software.intel.com/en-us/intel-mpi-library/)**|The Intel(R) MPI Library for Linux* OS is a multi-fabric message passing library based on ANL MPICH2 and OSU MVAPICH2. The Intel MPI Library for Linux OS implements the Message Passing Interface, version 2 (MPI-2) specification.|<nobr>5.0.3.048-iccifort-2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-iccifort-2017.0.098-GCC-5.4.0-2.26.lua</nobr>|
+|**[OpenMPI](http://www.open-mpi.org/)**|The Open MPI Project is an open source MPI-2 implementation.|<nobr>1.8.8-GNU-4.9.3-2.25</br>1.8.6-GNU-5.1.0-2.25</br>1.8.6-GCC-4.4.7-system</br>1.10.1-GNU-4.9.3-2.25</br>1.10.2-GCC-4.9.3-2.25.lua</nobr>|
+
+## Numlib
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[FFTW](http://www.fftw.org)**|FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data.|<nobr>3.3.4-gompi-2015b</br>3.3.4-gompi-2015e</br>3.3.4-gompi-2015g</br>3.3.4-intel-2015b</br>3.3.5-intel-2017.00.lua</br>3.3.4-gompi-2016a.lua</br>3.3.5-foss-2016a.lua</nobr>|
+|**[imkl](http://software.intel.com/en-us/intel-mkl/)**|Intel Math Kernel Library is a library of highly optimized, extensively threaded math routines for science, engineering, and financial applications that require maximum performance. Core math functions include BLAS, LAPACK, ScaLAPACK, Sparse Solvers, Fast Fourier Transforms, Vector Math, and more.|<nobr>11.2.3.187-iimpi-7.3.5-GNU-5.1.0-2.25</br>2017.0.098-iimpi-2017.00-GCC-5.4.0-2.26.lua</nobr>|
+|**[OpenBLAS](http://xianyi.github.com/OpenBLAS/)**|OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.|<nobr>0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0</br>0.2.14-gompi-2015e-LAPACK-3.5.0</br>0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0</br>0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0.lua</nobr>|
+|**[ScaLAPACK](http://www.netlib.org/scalapack/)**|The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers.|<nobr>2.0.2-gompi-2015b-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0.lua</nobr>|
+
+## Phys
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[VASP](http://www.vasp.at)**|The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials modelling, e.g. electronic structure calculations and quantum-mechanical molecular dynamics, from first principles.|<nobr>5.4.1-intel-2015b-24Jun15-UV</nobr>|
+
+## System
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[hwloc](http://www.open-mpi.org/projects/hwloc/)**|The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information as well as the locality of I/O devices such as network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently.|<nobr>1.11.0-GNU-4.9.3-2.25</br>1.11.0-GNU-5.1.0-2.25</br>1.11.2-GCC-4.9.3-2.25.lua</nobr>|
+
+## Toolchain
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[foss]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.|<nobr>2015b</br>2015e</br>2015g</br>2016a.lua</nobr>|
+|**[GNU](http://www.gnu.org/software/)**|Compiler-only toolchain with GCC and binutils.|<nobr>4.9.3-2.25</br>5.1.0-2.25</nobr>|
+|**[gompi]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support.|<nobr>2015g</br>2015b</br>2015e</br>2016a.lua</nobr>|
+|**[iccifort](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel C, C++ and Fortran compilers|<nobr>2015.3.187-GNU-5.1.0-2.25</br>2017.0.098-GCC-5.4.0-2.26.lua</nobr>|
+|**[iimpi](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel C/C++ and Fortran compilers, alongside Intel MPI.|<nobr>7.3.5-GNU-5.1.0-2.25</br>2017.00-GCC-5.4.0-2.26.lua</nobr>|
+|**[intel](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL.|<nobr>2015b</br>2017.00.lua</nobr>|
+|**[PRACE](http://www.prace-ri.eu/PRACE-Common-Production)**|The PRACE Common Production Environment (PCPE) is a set of software tools and libraries that are planned to be available on all PRACE execution sites. The PCPE also defines a set of environment variables that try to make compilation on all sites as homogeneous and simple as possible.|<nobr>20150630-intel-2015b</nobr>|
+
+## Tools
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Bash](http://www.gnu.org/software/bash)**|Bash is an sh-compatible command language interpreter that executes commands read from the standard input or from a file. Bash also incorporates useful features from the Korn and C shells (ksh and csh).|<nobr>4.2-intel-2015b</nobr>|
+|**[binutils](http://directory.fsf.org/project/binutils/)**|binutils: GNU binary utilities|<nobr>2.25-GCC-4.9.3-binutils-2.25</br>2.25</br>2.25-GCC-5.1.0-binutils-2.25</br>2.26.lua</br>2.26-GCCcore-5.4.0.lua</br>2.27.lua</br>2.27-GCCcore-6.2.0.lua</br>2.25-GCCcore-4.9.3.lua</nobr>|
+|**[bzip2](http://www.bzip.org/)**|bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression.|<nobr>1.0.6-intel-2015b</br>1.0.6-foss-2015g</br>1.0.6-foss-2015b</br>1.0.6-intel-2017.00.lua</br>1.0.6-foss-2016a.lua</nobr>|
+|**[cURL](http://curl.haxx.se)**|libcurl is a free and easy-to-use client-side URL transfer library, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMTP, SMTPS, Telnet and TFTP. libcurl supports SSL certificates, HTTP POST, HTTP PUT, FTP uploading, HTTP form based upload, proxies, cookies, user+password authentication (Basic, Digest, NTLM, Negotiate, Kerberos), file transfer resume, http proxy tunneling and more.|<nobr>7.37.1-intel-2015b</br>7.45.0-foss-2015b</br>7.37.1.lua</br>7.51.0-intel-2017.00.lua</nobr>|
+|**[EasyBuild](http://hpcugent.github.com/easybuild/)**|EasyBuild is a software build and installation framework written in Python that allows you to install software in a structured, repeatable and robust way.|<nobr>3.0.2</nobr>|
+|**[expat](http://expat.sourceforge.net/)**|Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags)|<nobr>2.1.0-foss-2015b</br>2.1.0.lua</br>2.1.0-intel-2017.00.lua</nobr>|
+|**git**| |<nobr>2.8.0-intel-2017.00.lua</br>2.11.0-intel-2017.00.lua</nobr>|
+|**[gzip](http://www.gnu.org/software/gzip/)**|gzip (GNU zip) is a popular data compression program as a replacement for compress|<nobr>1.6-foss-2015g</nobr>|
+|**MATLAB**| |<nobr>2015a-COM</br>2015a-EDU</nobr>|
+|**[Mercurial](http://mercurial.selenic.com/)**|Mercurial is a free, distributed source control management tool. It efficiently handles projects of any size and offers an easy and intuitive interface.|<nobr>3.7.3-foss-2015g-Python-2.7.9</nobr>|
+|**[numactl](http://oss.sgi.com/projects/libnuma/)**|The numactl program allows you to run your application program on specific cpu's and memory nodes. It does this by supplying a NUMA memory policy to the operating system before running your program. The libnuma library provides convenient ways for you to add NUMA memory policies into your own program.|<nobr>2.0.10-GNU-4.9.3-2.25</br>2.0.10-GNU-5.1.0-2.25</br>2.0.11-GCC-4.9.3-2.25.lua</nobr>|
+|**pigz**| |<nobr>2.3.3-GCC-6.2.0-2.27.lua</nobr>|
+|**[QEMU](http://wiki.qemu.org/Main_Page)**|QEMU is a generic and open source machine emulator and virtualizer.|<nobr>2.1.2-foss-2015b</br>2.1.2-GCC-4.4.7-system</br>2.1.2-GCC-4.4.7-system-VDE2</nobr>|
+|**[Szip](http://www.hdfgroup.org/doc_resource/SZIP/)**|Szip compression software, providing lossless compression of scientific data|<nobr>2.1-intel-2015b</br>2.1-foss-2015b</br>2.1-foss-2016a.lua</nobr>|
+|**[tcsh](http://www.tcsh.org)**|Tcsh is an enhanced, but completely compatible version of the Berkeley UNIX C shell (csh). It is a command language interpreter usable both as an interactive login shell and a shell script command processor. It includes a command-line editor, programmable word completion, spelling correction, a history mechanism, job control and a C-like syntax.|<nobr>6.18.01-intel-2015b</nobr>|
+|**[VDE2](http://vde.sourceforge.net)**|VDE is an ethernet compliant virtual network that can be spawned over a set of physical computer over the Internet. VDE is part of virtualsquare project.|<nobr>2.3.2-GCC-4.4.7-system</nobr>|
+|**[VTune](http://software.intel.com/en-us/intel-vtune-amplifier-xe)**|Intel VTune Amplifier XE 2016 is the premier performance profiler for C, C++, C#, Fortran, Assembly and Java.|<nobr>2016_update1</nobr>|
+|**XZ**| |<nobr>5.2.2-intel-2017.00.lua</br>5.2.2-foss-2016a.lua</nobr>|
+
+## Vis
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[gettext](http://www.gnu.org/software/gettext/)**|GNU `gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation|<nobr>0.19.2-intel-2015b</br>0.19.2-foss-2015b</br>0.19.4-GCC-4.4.7-system</br>0.19.2.lua</br>0.19.7-intel-2017.00.lua</br>0.19.6-foss-2016a.lua</nobr>|
+|**[GLib](http://www.gtk.org/)**|GLib is one of the base libraries of the GTK+ project|<nobr>2.40.0-intel-2015b</br>2.40.0-foss-2015b</br>2.40.0-GCC-4.4.7-system</nobr>|
+|**[Tk](http://www.tcl.tk/)**|Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages.|<nobr>8.5.12-intel-2015b</br>8.6.3-foss-2015b-no-X11</br>8.6.4-foss-2015b-no-X11</br>8.6.4-intel-2017.00-no-X11.lua</br>8.6.4-foss-2016a-no-X11.lua</nobr>|
+|**[VisIt](https://wci.llnl.gov/simulation/computer-codes/visit)**|VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool|<nobr>2.10.0</nobr>|
diff --git a/docs.it4i/modules-salomon.md b/docs.it4i/modules-salomon.md
index 3553cf37ac250455380087e155174d5298647c15..72ccd2439153233cd3be2206a06be9d3a922eb60 100644
--- a/docs.it4i/modules-salomon.md
+++ b/docs.it4i/modules-salomon.md
@@ -1,3 +1,376 @@
-| Name | Version |
-| ---- | ------: |
-| modulename | 3.0.3 |
+# List of Available Modules
+
+## Core
+
+|Module|Description|Available versions|Clusters|
+|--|--|--|--|
+|**lmod**| |<nobr>7.2.2.lua</nobr>|AS|
+|**settarg**| |<nobr>7.2.2.lua</nobr>|AU|
+
+## Bio
+
+|Module|Description|Available versions|Clusters|
+|--|--|--|--|
+|**[almost](http://www-almost.ch.cam.ac.uk/site)**|all atom molecular simulation toolkit - is a fast and flexible molecular modeling environment that provides powerful and efficient algorithms for molecular simulation, homology modeling, de novo design and ab-initio calculations.|<nobr>2.1.0-intel-2015b</br>2.1.0-foss-2015b</br>2.1.0-foss-2015g</nobr>|AS-</br>--S</br>A--|
+|**[Amber](http://ambermd.org)**|A set of molecular mechanical force fields for the simulation of biomolecules|<nobr>14</nobr>|-SU|
+|**[BCFtools](http://www.htslib.org/)**|Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants|<nobr>1.3-foss-2015g</nobr>|ASU|
+|**[BWA](http://bio-bwa.sourceforge.net/)**|Burrows-Wheeler Aligner (BWA) is an efficient program that aligns relatively short nucleotide sequences against a long reference sequence such as the human genome.|<nobr>0.7.5a-foss-2015g</nobr>|--U|
+|**[FastQC](http://www.bioinformatics.babraham.ac.uk/projects/fastqc/)**|FastQC is a quality control application for high throughput sequence data. It reads in sequence data in a variety of formats and can either provide an interactive application to review the results of several different QC checks, or create an HTML based report which can be integrated into a pipeline.|<nobr>0.11.3</nobr>|---|
+
+## Cae
+
+|Module|Description|Available versions|
+|--|--|--|
+|**Adams**| |<nobr>2013.2</nobr>|
+|**ANSYS**| |<nobr>16.1</br>17.0</nobr>|
+|**COMSOL**| |<nobr>51-COM</br>51-EDU</nobr>|
+|**Digimat**| |<nobr>5.0.1-COM</br>5.0.1-EDU</nobr>|
+|**[FreeFem++](http://www.freefem.org)**|FreeFem++ is a partial differential equation solver. It has its own language. freefem scripts can solve multiphysics non linear systems in 2D and 3D. Problems involving PDE (2d, 3d) from several branches of physics such as fluid-structure interactions require interpolations of data on several meshes and their manipulation within one program. FreeFem++ includes a fast 2^d-tree-based interpolation algorithm and a language for the manipulation of data on multiple meshes (as a follow up of bamg (now a part of FreeFem++ ). FreeFem++ is written in C++ and the FreeFem++ language is a C++ idiom. It runs on Macs, Windows, Unix machines. FreeFem++ replaces the older freefem and freefem+.|<nobr>3.45-intel-2015b</nobr>|
+|**HyperWorks**| |<nobr>13.0</nobr>|
+|**Marc**| |<nobr>2013.1.0</nobr>|
+|**[OpenFOAM](http://www.openfoam.com/)**|OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics.|<nobr>2.3.0-intel-2015b</br>2.2.2-intel-2015b</br>3.0.0-intel-2016.01</nobr>|
+
+## Chem
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[ABINIT](http://www.abinit.org/)**|Abinit is a plane wave pseudopotential code for doing condensed phase electronic structure calculations using DFT.|<nobr>7.10.1-foss-2015b</br>7.10.1-intel-2015b</nobr>|
+|**[CP2K](http://www.cp2k.org/)**|CP2K is a freely available (GPL) program, written in Fortran 95, to perform atomistic and molecular simulations of solid state, liquid, molecular and biological systems. It provides a general framework for different methods such as e.g. density functional theory (DFT) using a mixed Gaussian and plane waves approach (GPW), and classical pair and many-body potentials.|<nobr>2.6.0-intel-2015b</nobr>|
+|**[LAMMPS](http://lammps.sandia.gov)**|LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. Has potentials for solid-state materials (metals, semiconductors) and soft matter (biomolecules, polymers) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale.|<nobr>28Jun14-intel-2015b</nobr>|
+|**[libctl](http://ab-initio.mit.edu/libctl)**|libctl is a free Guile-based library implementing flexible control files for scientific simulations.|<nobr>3.2.2-intel-2015b</nobr>|
+|**[Libint](https://sourceforge.net/p/libint/)**|Libint library is used to evaluate the traditional (electron repulsion) and certain novel two-body matrix elements (integrals) over Cartesian Gaussian functions used in modern atomic and molecular theory.|<nobr>1.1.4-gompi-2015b</br>1.1.4-foss-2015b</br>1.1.4-intel-2015b</nobr>|
+|**[libxc](http://www.tddft.org/programs/octopus/wiki/index.php/Libxc)**|Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals.|<nobr>2.2.0-gompi-2015b</br>2.2.0-foss-2015b</br>2.2.1-intel-2015b</nobr>|
+|**Molpro**| |<nobr>2010.1-patch-57-intel2015b</nobr>|
+|**[NAMD](http://www.ks.uiuc.edu/Research/namd/)**|NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems.|<nobr>2.9-mpi</nobr>|
+|**[NWChem](http://www.nwchem-sw.org)**|NWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters. NWChem software can handle: biomolecules, nanostructures, and solid-state; from quantum to classical, and all combinations; Gaussian basis functions or plane-waves; scaling from one to thousands of processors; properties and relativity.|<nobr>6.3.revision2-2013-10-17-Python-2.7.8</br>6.5.revision26243-intel-2015b-2014-09-10-Python-2.7.8</nobr>|
+|**[ORCA](http://cec.mpg.de/forum/)**|ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules. It features a wide variety of standard quantum chemical methods ranging from semiempirical methods to DFT to single- and multireference correlated ab initio methods. It can also treat environmental and relativistic effects.|<nobr>3_0_3-linux_x86-64</nobr>|
+|**[QuantumESPRESSO](http://www.pwscf.org/)**|Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft).|<nobr>5.4.0-intel-2017.00</nobr>|
+|**[S4MPLE](http://infochim.u-strasbg.fr/spip.php?rubrique152)**|S4MPLE (Sampler For Multiple Protein-Ligand Entities) is a flexible molecular modeling tool, supporting empirical force field-driven conformational sampling and geometry optimization heuristics using a hybrid genetic algorithm (GA).|<nobr>1.0.0</nobr>|
+|**Scipion**| |<nobr>1.0.1-Java-8u112-intel-2017.00</nobr>|
+|**[xdrfile](http://www.gromacs.org/Developer_Zone/Programming_Guide/XTC_Library)**|XTC library|<nobr>1.1.4-foss-2015g</nobr>|
+
+## Compiler
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[BerkeleyUPC](http://upc.lbl.gov)**|The goal of the Berkeley UPC compiler group is to develop a portable, high performance implementation of UPC for large-scale multiprocessors, PC clusters, and clusters of shared memory multiprocessors.|<nobr>2.16.2-gompi-2015b</nobr>|
+|**[Clang](http://clang.llvm.org/)**|C, C++, Objective-C compiler, based on LLVM. Does not include C++ standard library -- use libstdc++ from GCC.|<nobr>3.7.0-GNU-5.1.0-2.25</nobr>|
+|**[GCC](http://gcc.gnu.org/)**|The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).|<nobr>4.9.2-binutils-2.25</br>4.8.3</br>5.1.0-binutils-2.25</br>4.4.7-system</br>4.9.3-binutils-2.25</br>4.7.4</br>5.2.0</br>4.9.3</br>5.3.0-binutils-2.25</br>5.3.0-2.25</br>5.3.1-snapshot-20160419-2.25</br>4.9.3-2.25</br>5.3.0-2.26</br>4.9.2</br>5.4.0-2.26</br>6.2.0-2.27.lua</nobr>|
+|**[GCCcore](http://gcc.gnu.org/)**|The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...).|<nobr>4.9.3</br>5.3.0</br>5.3.1-snapshot-20160419</br>5.4.0</br>6.2.0.lua</nobr>|
+|**[icc](http://software.intel.com/en-us/intel-compilers/)**|C and C++ compiler from Intel|<nobr>2013.5.192</br>2013.5.192-GCC-4.8.3</br>2015.3.187</br>2015.3.187-GNU-5.1.0-2.25</br>2016.0.109-GCC-4.9.3</br>2016.1.150-GCC-4.9.3</br>2016.1.150</br>2016.3.210-GCC-5.3.0-2.26</br>2015.3.187-GNU-4.9.3-2.25</br>2016.1.150-GCC-4.9.3-2.25</br>2017.0.098-GCC-5.4.0-2.26</nobr>|
+|**[ifort](http://software.intel.com/en-us/intel-compilers/)**|Fortran compiler from Intel|<nobr>2013.5.192</br>2013.5.192-GCC-4.8.3</br>2015.3.187</br>2015.3.187-GNU-5.1.0-2.25</br>2016.0.109-GCC-4.9.3</br>2016.1.150-GCC-4.9.3</br>2016.1.150-GCC-4.9.3-2.25</br>2016.1.150</br>2016.3.210-GCC-5.3.0-2.26</br>2015.3.187-GNU-4.9.3-2.25</br>2017.0.098-GCC-5.4.0-2.26</nobr>|
+|**[LLVM](http://llvm.org/)**|The LLVM Core libraries provide a modern source- and target-independent optimizer, along with code generation support for many popular CPUs (as well as some less common ones!) These libraries are built around a well specified code representation known as the LLVM intermediate representation ("LLVM IR"). The LLVM Core libraries are well documented, and it is particularly easy to invent your own language (or port an existing compiler) to use LLVM as an optimizer and code generator.|<nobr>3.7.1-foss-2015g</br>3.7.1-intel-2016a</br>3.8.0-foss-2016a</br>3.8.0-intel-2016a</br>3.9.0-intel-2017.00</nobr>|
+|**[OpenCoarrays](http://www.opencoarrays.org/)**|A transport layer for coarray Fortran compilers.|<nobr>1.4.0-GCC-5.3.0-2.25</br>1.4.0-GCC-5.3.1-snapshot-20160419-2.25</nobr>|
+|**PGI**| |<nobr>15.7</br>16.10-GNU-4.9.3-2.25</nobr>|
+
+## Data
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[GDAL](http://www.gdal.org/)**|GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. As a library, it presents a single abstract data model to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for data translation and processing.|<nobr>1.9.2-foss-2015g</br>2.1.0-foss-2015g</br>2.0.1-foss-2015b</br>2.1.0-GNU-5.1.0-2.25-intel-2015b</br>2.1.0-GNU-5.1.0-2.25</br>2.1.0-intel-2015b</br>2.0.2-intel-2017.00</nobr>|
+|**[h5py](http://www.h5py.org/)**|HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data.|<nobr>2.4.0-ictce-7.3.5-Python-2.7.9-serial</nobr>|
+|**[HDF5](http://www.hdfgroup.org/HDF5/)**|HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.|<nobr>1.8.13-intel-2015b</br>1.8.13-intel-2015b-no-mpi</br>1.8.14-ictce-7.3.5-serial</br>1.8.13-intel-2016.01</br>1.8.13-foss-2015g</br>1.8.16-intel-2015b</br>1.8.16-intel-2015b-threadsafe</br>1.8.16-foss-2015g</br>1.10.0-patch1-intel-2016.01-mic</br>1.8.15-patch1-foss-2015b</br>1.8.16-foss-2016a</br>1.8.16-intel-2017.00</nobr>|
+|**[netCDF](http://www.unidata.ucar.edu/software/netcdf/)**|NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.|<nobr>4.3.2-intel-2015b</br>4.3.2-intel-2016.01</br>4.3.2-foss-2015g</br>4.3.3.1-foss-2015b</br>4.4.0-intel-2017.00</br>4.3.3.1-intel-2017.00</nobr>|
+|**[netCDF-Fortran](http://www.unidata.ucar.edu/software/netcdf/)**|NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.|<nobr>4.4.0-intel-2016.01</nobr>|
+
+## Debugger
+
+|Module|Description|Available versions|
+|--|--|--|
+|**aislinn**| |<nobr>20160105-Python-2.7.9-gompi-2015e</nobr>|
+|**DDT**| |<nobr>4.2</br>5.0.1</nobr>|
+|**[Forge](http://www.allinea.com/products/develop-allinea-forge)**|Allinea Forge is the complete toolsuite for software development - with everything needed to debug, profile, optimize, edit and build C, C++ and FORTRAN applications on Linux for high performance - from single threads through to complex parallel HPC codes with MPI, OpenMP, threads or CUDA.|<nobr>5.1-43967</br>6.0.6</br>6.0.5</br>6.1.2.lua</nobr>|
+|**[PerformanceReports](http://www.allinea.com/products/allinea-performance-reports)**|Allinea Performance Reports are the most effective way to characterize and understand the performance of HPC application runs. One single-page HTML report elegantly answers a range of vital questions for any HPC site. - Is this application well-optimized for the system and the processors it is running on? - Does it benefit from running at this scale? - Are there I/O, networking or threading bottlenecks affecting performance? - Which hardware, software or configuration changes can we make to improve performance further. - How much energy did this application use?|<nobr>5.1-43967</br>6.0.6</nobr>|
+|**TotalView**| |<nobr>8.15.4-6-linux-x86-64</nobr>|
+|**[Valgrind](http://valgrind.org/downloads/)**|Valgrind: Debugging and profiling tools|<nobr>3.11.0-foss-2015b</br>3.11.0-intel-2015b</nobr>|
+
+## Devel
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[ant](http://ant.apache.org/)**|Apache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications.|<nobr>1.9.3-Java-1.7.0_79</nobr>|
+|**[Autoconf](http://www.gnu.org/software/autoconf/)**|Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls.|<nobr>2.69-GNU-5.1.0-2.25</br>2.69-GNU-4.9.3-2.25</br>2.69-foss-2015g</br>2.69-intel-2015b</br>2.69-GCC-4.9.3-2.25</br>2.69-intel-2016.01</br>2.69</br>2.69-intel-2017.00</br>2.69-intel-2016a</br>2.69-foss-2016a</nobr>|
+|**[Automake](http://www.gnu.org/software/automake/automake.html)**|Automake: GNU Standards-compliant Makefile generator|<nobr>1.15-GNU-5.1.0-2.25</br>1.15-GNU-4.9.3-2.25</br>1.15-intel-2015b</br>1.15-GCC-4.9.3-2.25</br>1.15-foss-2015g</br>1.15-intel-2016.01</br>1.15</br>1.15-intel-2017.00</br>1.15-intel-2016a</br>1.15-foss-2016a</nobr>|
+|**[Autotools](http://autotools.io)**|This bundle collect the standard GNU build tools: Autoconf, Automake and libtool|<nobr>20150215-GNU-5.1.0-2.25</br>20150215-GNU-4.9.3-2.25</br>20150215-intel-2015b</br>20150215-GCC-4.9.3-2.25</br>20150215-intel-2016.01</br>20150215</br>20150215-intel-2017.00</br>20150215-intel-2016a</br>20150215-foss-2016a</nobr>|
+|**[Boost](http://www.boost.org/)**|Boost provides free peer-reviewed portable C++ source libraries.|<nobr>1.58.0-Python-2.7.9</br>1.58.0-intel-2015b-Python-2.7.9</br>1.58.0-ictce-7.3.5-Python-2.7.9</br>1.58.0-gompi-2015e-Python-2.7.9</br>1.58.0-foss-2015g-Python-2.7.9</br>1.58.0-intel-2016.01-Python-2.7.9</br>1.59.0-intel-2015b-Python-2.7.11</br>1.59.0-intel-2016.01</br>1.60.0-foss-2015g-Python-2.7.9</br>1.60.0-intel-2015b-Python-2.7.11</br>1.61.0-foss-2016a</br>1.61.0-foss-2016a-serial</nobr>|
+|**[CMake](http://www.cmake.org)**|CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software.|<nobr>3.0.0-intel-2015b</br>3.0.0-ictce-7.3.5</br>3.3.1-GNU-5.1.0-2.25</br>3.3.1-GNU-4.9.3-2.25</br>3.3.1-foss-2015g</br>3.0.0-intel-2016.01</br>3.3.1-intel-2016.01</br>3.0.0-foss-2015g</br>3.4.1-intel-2015b</br>3.3.1-GCC-5.3.0-2.25</br>3.3.1-GCC-5.3.1-snapshot-20160419-2.25</br>3.3.2-intel-2016.01</br>3.3.2-GNU-4.9.3-2.25</br>3.4.1-GCCcore-4.9.3</br>3.4.1-foss-2015b</br>3.5.2</br>3.5.2-GCC-4.9.3-2.25</br>3.5.2-intel-2017.00</br>3.5.2-foss-2016a</br>3.4.3-intel-2016a</br>3.5.1-intel-2016a</br>3.6.2.lua</nobr>|
+|**[Doxygen](http://www.doxygen.org)**|Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D.|<nobr>1.8.7-intel-2015b</br>1.8.7-intel-2016.01</br>1.8.7-foss-2015g</br>1.8.10-foss-2015b</br>1.8.11</br>1.8.10-intel-2017.00</br>1.8.11-intel-2017.00</nobr>|
+|**[fontsproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 font extension wire protocol|<nobr>2.1.3-foss-2015g</br>2.1.3</br>2.1.3-intel-2016a</br>2.1.3-foss-2016a</nobr>|
+|**[glproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X protocol and ancillary headers|<nobr>1.4.16-foss-2015g</br>1.4.17-intel-2016a</br>1.4.17-foss-2016a</nobr>|
+|**[gperf](http://www.gnu.org/software/gperf/)**|GNU gperf is a perfect hash function generator. For a given list of strings, it produces a hash function and hash table, in form of C or C++ code, for looking up a value depending on the input string. The hash function is perfect, which means that the hash table has no collisions, and the hash table lookup needs a single string comparison only.|<nobr>3.0.4-foss-2015g</br>3.0.4-intel-2016a</br>3.0.4-foss-2016a</nobr>|
+|**[guile](http://www.gnu.org/software/guile)**|Guile is the GNU Ubiquitous Intelligent Language for Extensions, the official extension language for the GNU operating system.|<nobr>1.8.8-intel-2015b</br>1.8.8-foss-2015b</br>1.8.8-foss-2015g</br>1.8.8</nobr>|
+|**[JUnit](http://sourceforge.net/projects/junit)**|A programmer-oriented testing framework for Java.|<nobr>4.11-Java-1.7.0_79</nobr>|
+|**[libSM](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 Session Management library, which allows for applications to both manage sessions, and make use of session managers to save and restore their state for later use.|<nobr>1.2.2-intel-2015b</br>1.2.2-foss-2015g</br>1.2.2</nobr>|
+|**[M4](http://www.gnu.org/software/m4/m4.html)**|GNU M4 is an implementation of the traditional Unix macro processor. It is mostly SVR4 compatible although it has some extensions (for example, handling more than 9 positional parameters to macros). GNU M4 also has built-in functions for including files, running shell commands, doing arithmetic, etc.|<nobr>1.4.17</br>1.4.17-GNU-5.1.0-2.25</br>1.4.17-foss-2015b</br>1.4.17-intel-2015b</br>1.4.16-intel-2015b</br>1.4.17-GCC-4.9.3-binutils-2.25</br>1.4.17-GNU-4.9.3-2.25</br>1.4.17-GCCcore-4.9.3</br>1.4.17-intel-2016.01</br>1.4.16-foss-2015g</br>1.4.17-foss-2015g</br>1.4.17-GCC-5.1.0-binutils-2.25</br>1.4.17-GCCcore-5.3.0</br>1.4.17-GCCcore-5.3.1-snapshot-20160419</br>1.4.17-GCC-4.9.3-2.25</br>1.4.17-GCCcore-5.4.0</br>1.4.17-intel-2017.00</br>1.4.17-intel-2016a</br>1.4.17-foss-2016a</br>1.4.17-GCCcore-6.2.0.lua</nobr>|
+|**[make](http://www.gnu.org/software/make/make.html)**|make-3.82: GNU version of make utility|<nobr>3.82-intel-2015b</br>3.82</nobr>|
+|**[makedepend](http://www.linuxfromscratch.org/blfs/view/svn/x/makedepend.html)**|The makedepend package contains a C-preprocessor like utility to determine build-time dependencies.|<nobr>1.0.4-foss-2015g</br>1.0.4</br>1.0.5-intel-2016a</br>1.0.5-foss-2016a</nobr>|
+|**[Maven](http://maven.apache.org/index.html)**|Binary maven install, Apache Maven is a software project management and comprehension tool. Based on the concept of a project object model (POM), Maven can manage a project's build, reporting and documentation from a central piece of information.|<nobr>3.3.9</nobr>|
+|**[ncurses](http://www.gnu.org/software/ncurses/)**|The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses.|<nobr>5.9-intel-2015b</br>5.9-ictce-5.5.0</br>5.9-GNU-5.1.0-2.25</br>5.9-ictce-7.3.5</br>5.9-foss-2015b</br>5.9-gompi-2015e</br>5.9-foss-2015g</br>5.9-GNU-4.9.3-2.25</br>5.9-intel-2016.01</br>5.9-GCC-5.3.0-2.25</br>5.9-GCC-5.3.1-snapshot-20160419-2.25</br>6.0-GCCcore-4.9.3</br>6.0-foss-2015g</br>6.0-foss-2015b</br>6.0-intel-2016.01</br>6.0</br>5.9</br>6.0-intel-2016a</br>6.0-intel-2017.00</br>6.0-foss-2016a</br>.6.0</nobr>|
+|**[PCRE](http://www.pcre.org/)**|The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.|<nobr>8.36-intel-2015b</br>8.36-foss-2015g</br>8.37-foss-2015g</br>8.36-intel-2016.01</br>8.37</br>8.39-intel-2017.00</nobr>|
+|**[PCRE2](http://www.pcre.org/)**|The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.|<nobr>10.22-intel-2017.00</nobr>|
+|**[pkg-config](http://www.freedesktop.org/wiki/Software/pkg-config/)**|pkg-config is a helper tool used when compiling applications and libraries. It helps you insert the correct compiler options on the command line so an application can use gcc -o test test.c `pkg-config --libs --cflags glib-2.0` for instance, rather than hard-coding values on where to find glib (or other libraries).|<nobr>0.27.1-intel-2015b</br>0.27.1-foss-2015b</br>0.27.1-foss-2015g</br>0.27.1</br>0.29</br>0.29-intel-2016a</br>0.29-foss-2016a</br>0.29.1-intel-2016a</br>0.29.1-foss-2016a</nobr>|
+|**[python-meep](https://code.launchpad.net/python-meep)**|Python wrapper for the Meep FDTD solver.|<nobr>1.4.2-intel-2015b-Python-2.7.9-Meep-1.3</nobr>|
+|**[Qt](http://qt-project.org/)**|Qt is a comprehensive cross-platform C++ application framework.|<nobr>4.8.6-foss-2015g</br>4.8.6</nobr>|
+|**[renderproto](http://www.freedesktop.org/wiki/Software/xlibs)**|Xrender protocol and ancillary headers|<nobr>0.11-intel-2015b</br>0.11</nobr>|
+|**[SCons](http://www.scons.org/)**|SCons is a software construction tool.|<nobr>2.3.6-Python-2.7.9</br>2.3.6-foss-2015g-Python-2.7.9</nobr>|
+|**[Spark](http://spark.apache.org)**|Spark is Hadoop MapReduce done in memory|<nobr>1.5.2</nobr>|
+|**[SQLite](http://www.sqlite.org/)**|SQLite: SQL Database Engine in a C Library|<nobr>3.8.8.1-intel-2015b</br>3.8.8.1-ictce-7.3.5</br>3.8.8.1-foss-2015b</br>3.8.8.1-GNU-5.1.0-2.25</br>3.8.8.1-gompi-2015e</br>3.8.8.1-intel-2016.01</br>3.10.1-foss-2015g</br>3.9.2-intel-2015b</br>3.8.8.1-foss-2015g</br>3.8.10.2-GNU-4.9.3-2.25</br>3.8.10.2-GCC-4.9.3-2.25</br>3.9.2-foss-2015g</br>3.9.2-intel-2016.01</br>3.8.8.1</br>3.9.2-GCC-4.9.3-2.25</br>3.9.2-intel-2017.00</br>3.9.2-intel-2016a</br>3.9.2-foss-2016a</nobr>|
+|**[SWIG](http://www.swig.org/)**|SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.|<nobr>3.0.7-Python-2.7.9</br>2.0.12-Python-2.7.9</br>2.0.12-intel-2015b-Python-2.7.9</nobr>|
+|**[xbitmaps](http://www.freedesktop.org/wiki/Software/xlibs)**|provides bitmaps for x|<nobr>1.1.1-intel-2015b</br>1.1.1-foss-2015g</br>1.1.1</nobr>|
+|**[xcb-proto](http://xcb.freedesktop.org/)**|The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility.|<nobr>1.10-Python-2.7.8</br>1.11-intel-2015b-Python-2.7.9</br>1.11-foss-2015g-Python-2.7.9</br>1.11-Python-2.7.9</br>1.11</nobr>|
+|**[xextproto](http://www.freedesktop.org/wiki/Software/xlibs)**|XExtProto protocol headers.|<nobr>7.3.0-intel-2015b</br>7.3.0-foss-2015g</br>7.3.0</br>7.3.0-intel-2016a</br>7.3.0-foss-2016a</nobr>|
+|**[xineramaproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X protocol and ancillary headers for xinerama|<nobr>1.2.1-intel-2015b</br>1.2.1</nobr>|
+|**[xorg-macros](http://cgit.freedesktop.org/xorg/util/macros)**|X.org macros utilities.|<nobr>1.17-foss-2015g</br>1.17</br>1.19.0-intel-2016a</br>1.19.0-foss-2016a</nobr>|
+|**[xproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X protocol and ancillary headers|<nobr>7.0.26-foss-2015g</br>7.0.26-intel-2015b</br>7.0.26</br>7.0.28</br>7.0.28-intel-2016a</br>7.0.28-foss-2016a</nobr>|
+|**[xtrans](http://www.freedesktop.org/wiki/Software/xlibs)**|xtrans includes a number of routines to make X implementations transport-independent; at time of writing, it includes support for UNIX sockets, IPv4, IPv6, and DECnet.|<nobr>1.3.4-intel-2015b</br>1.3.5-intel-2015b</br>1.3.5-foss-2015g</br>1.3.5</br>1.3.5-intel-2016a</br>1.3.5-foss-2016a</nobr>|
+
+## Geo
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[DCW](http://gmt.soest.hawaii.edu/projects/gmt)**|country polygons for GMT|<nobr>1.1.2</nobr>|
+|**[GMT](http://gmt.soest.hawaii.edu/)**|GMT is an open source collection of about 80 command-line tools for manipulating geographic and Cartesian data sets (including filtering, trend fitting, gridding, projecting, etc.) and producing PostScript illustrations ranging from simple x-y plots via contour maps to artificially illuminated surfaces and 3D perspective views; the GMT supplements add another 40 more specialized and discipline-specific tools.|<nobr>5.2.1-foss-2015g</nobr>|
+|**[PROJ_4](http://proj.osgeo.org)**|PROJ.4 - Cartographic Projections Library originally written by Gerald Evenden then of the USGS.|<nobr>4.9.2-foss-2015g</nobr>|
+
+## Lang
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Bison](http://www.gnu.org/software/bison)**|Bison is a general-purpose parser generator that converts an annotated context-free grammar into a deterministic LR or generalized LR (GLR) parser employing LALR(1) parser tables.|<nobr>2.7-foss-2015b</br>3.0.2-intel-2015b</br>2.7-GNU-5.1.0-2.25</br>2.7-intel-2015b</br>2.5-intel-2015b</br>3.0.4-GCC-4.9.3-binutils-2.25</br>2.7-foss-2015g</br>3.0.4-GCCcore-4.9.3</br>3.0.2-intel-2016.01</br>3.0.2-foss-2015g</br>3.0.4-GCC-5.1.0-binutils-2.25</br>3.0.4</br>3.0.4-GCCcore-5.3.0</br>3.0.4-GCCcore-5.3.1-snapshot-20160419</br>3.0.4-intel-2016.01</br>3.0.4-foss-2015b</br>3.0.2</br>2.7</br>3.0.4-GCCcore-5.4.0</br>3.0.4-intel-2017.00</br>3.0.4-intel-2016a</br>3.0.4-foss-2016a</br>3.0.4-GCCcore-6.2.0.lua</nobr>|
+|**[byacc](http://invisible-island.net/byacc/byacc.html)**|Berkeley Yacc (byacc) is generally conceded to be the best yacc variant available. In contrast to bison, it is written to avoid dependencies upon a particular compiler.|<nobr>20120526-intel-2015b</br>20120526-foss-2015b</br>20120526-foss-2015g</br>20120526</nobr>|
+|**[flex](http://flex.sourceforge.net/)**|Flex (Fast Lexical Analyzer) is a tool for generating scanners. A scanner, sometimes called a tokenizer, is a program which recognizes lexical patterns in text.|<nobr>2.5.38-GCC-4.8.3</br>2.5.39-intel-2015b</br>2.5.37-intel-2015b</br>2.5.35-intel-2015b</br>2.5.39-foss-2015b</br>2.5.39-GCC-4.9.3-binutils-2.25</br>2.5.39-foss-2015g</br>2.5.39-GCCcore-4.9.3</br>2.5.39-intel-2016.01</br>2.5.39-GCC-5.1.0-binutils-2.25</br>2.5.39</br>2.5.39-GCCcore-5.3.0</br>2.5.39-GCCcore-5.3.1-snapshot-20160419</br>2.6.0</br>2.6.0-GCCcore-5.3.0</br>2.6.0-GCCcore-5.4.0</br>2.5.39-intel-2017.00</br>2.6.0-intel-2016a</br>2.6.0-foss-2016a</br>2.6.0-GCCcore-6.2.0.lua</nobr>|
+|**[Java](http://java.com/)**|Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.|<nobr>1.7.0_79</br>1.8.0_51</br>1.8.0_72</br>1.8.0_112.lua</nobr>|
+|**[libgdiplus](https://github.com/mono/libgdiplus)**|An Open Source implementation of the GDI+ API.|<nobr>3.12-GNU-5.1.0-2.25</br>3.12-GCC-4.4.7-system</br>3.12-intel-2016.01</br>3.12</nobr>|
+|**[Lua](http://www.lua.org/)**|Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping.|<nobr>.5.1.4-8</br>5.1.4-8.lua</nobr>|
+|**[Mono](http://www.mono-project.com)**|Mono is an open source implementation of Microsoft's .NET Framework based on the ECMA standards for C# and the Common Language Runtime.|<nobr>4.0.3.20-GNU-5.1.0-2.25</br>3.12.1</br>3.12.1-GCC-4.4.7-system</br>4.2.2.10-intel-2016.01</nobr>|
+|**[NASM](http://www.nasm.us/)**|NASM: General-purpose x86 assembler|<nobr>2.11.05-foss-2015b</br>2.11.06-intel-2015b</br>2.11.05-intel-2015b</br>2.11.05-foss-2015g</br>2.11.08-foss-2015b</br>2.11.05</br>2.11.08-intel-2017.00</nobr>|
+|**[OpenCL-builder](https://software.intel.com/en-us/intel-opencl)**|OpenCLâ„¢ is the first open, royalty-free standard for cross-platform, parallel programming of modern processors found in personal computers, servers and handheld/embedded devices. OpenCL (Open Computing Language) greatly improves speed and responsiveness for a wide spectrum of applications in numerous market categories from gaming and entertainment to scientific and medical software. This is builder (formerly runtime) package.|<nobr>2015</nobr>|
+|**[OpenCL-runtime](https://software.intel.com/en-us/intel-opencl)**|OpenCLâ„¢ is the first open, royalty-free standard for cross-platform, parallel programming of modern processors found in personal computers, servers and handheld/embedded devices. OpenCL (Open Computing Language) greatly improves speed and responsiveness for a wide spectrum of applications in numerous market categories from gaming and entertainment to scientific and medical software.|<nobr>15.1</nobr>|
+|**[Perl](http://www.perl.org/)**|Larry Wall's Practical Extraction and Report Language|<nobr>5.16.3-intel-2015b</br>5.20.2-bare</br>5.20.2-GNU-4.9.3-2.25-bare</br>5.22.2-intel-2017.00</nobr>|
+|**[Python](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>2.7.8-intel-2015b</br>2.7.9-intel-2015b</br>2.7.9-ictce-7.3.5</br>2.7.9-foss-2015b</br>2.7.9-GNU-5.1.0-2.25</br>2.7.9-gompi-2015e</br>2.7.9-foss-2015g</br>2.7.9-intel-2016.01</br>2.7.8-intel-2016.01</br>2.7.11-intel-2015b</br>2.7.10-GNU-4.9.3-2.25-bare</br>2.7.10-GCC-4.9.3-2.25-bare</br>3.5.1-intel-2016.01</br>2.7.9</br>3.5.1</br>2.7.11-GCC-4.9.3-2.25-bare</br>3.5.1-intel-2017.00</br>3.5.2-intel-2017.00</br>2.7.11-intel-2016a</br>3.5.2-foss-2016a</br>2.7.11-foss-2016a</br>2.7.11-intel-2017.00</br>3.5.2.lua</br>3.4.3-intel-2015b</nobr>|
+|**[R](http://www.r-project.org/)**|R is a free software environment for statistical computing and graphics.|<nobr>3.1.1-intel-2015b</br>3.2.3-intel-2016.01</br>3.2.3-foss-2015b</nobr>|
+|**[Racket](http://racket-lang.org)**|Racket is a full-spectrum programming language. It goes beyond Lisp and Scheme with dialects that support objects, types, laziness, and more.|<nobr>6.1.1-GNU-5.1.0-2.25</nobr>|
+|**[Ruby](https://www.ruby-lang.org)**|Ruby is a dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write.|<nobr>2.1.5-intel-2015b</br>2.3.1</nobr>|
+|**[SIP](http://www.riverbankcomputing.com/software/sip/)**|SIP is a tool that makes it very easy to create Python bindings for C and C++ libraries.|<nobr>4.16.4-foss-2015g-Python-2.7.9</br>4.17-foss-2015g-Python-2.7.9</br>4.17-Python-2.7.9</nobr>|
+|**[SnuCL](http://snucl.snu.ac.kr)**|An OpenCL Framework for Heterogeneous Clusters|<nobr>1.3.3-gompi-2015e</nobr>|
+|**[Tcl](http://www.tcl.tk/)**|Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more.|<nobr>8.6.3-intel-2015b</br>8.5.12-intel-2015b</br>8.6.3-ictce-7.3.5</br>8.6.3-foss-2015b</br>8.6.3-GNU-5.1.0-2.25</br>8.6.3-gompi-2015e</br>8.6.3-foss-2015g</br>8.6.3-intel-2016.01</br>8.6.4-intel-2015b</br>8.6.4-GNU-4.9.3-2.25</br>8.6.4-GCC-4.9.3-2.25</br>8.6.4-foss-2015b</br>8.6.4-foss-2015g</br>8.6.4-intel-2016.01</br>8.6.4</br>8.6.3</br>8.5.12</br>8.6.4-intel-2017.00</br>8.6.4-intel-2016a</br>8.6.4-foss-2016a</nobr>|
+
+## Lib
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[FOX](http://fox-toolkit.org)**|FOX is a C++ based Toolkit for developing Graphical User Interfaces easily and effectively. It offers a wide, and growing, collection of Controls, and provides state of the art facilities such as drag and drop, selection, as well as OpenGL widgets for 3D graphical manipulation.|<nobr>1.6.51-foss-2015g</nobr>|
+|**[libdrm](http://dri.freedesktop.org)**|Direct Rendering Manager runtime library.|<nobr>2.4.27-foss-2015g</br>2.4.27</br>2.4.67-intel-2016a</br>2.4.68-intel-2016a</br>2.4.68-foss-2016a</nobr>|
+|**[libffi](http://sourceware.org/libffi/)**|The libffi library provides a portable, high level programming interface to various calling conventions. This allows a programmer to call any function specified by a call interface description at run-time.|<nobr>3.1-intel-2015b</br>3.1-GNU-5.1.0-2.25</br>3.0.13-intel-2015b</br>3.1-foss-2015b</br>3.0.13-foss-2015b</br>3.0.13-foss-2015g</br>3.1-intel-2016.01</br>3.0.13</br>3.2.1-intel-2017.00</nobr>|
+|**[libfontenc](http://www.freedesktop.org/wiki/Software/xlibs/)**|X11 font encoding library|<nobr>1.1.3-foss-2015g</br>1.1.3</br>1.1.3-intel-2016a</br>1.1.3-foss-2016a</nobr>|
+|**[libjpeg-turbo](http://sourceforge.net/libjpeg-turbo/)**|libjpeg-turbo is a fork of the original IJG libjpeg which uses SIMD to accelerate baseline JPEG compression and decompression. libjpeg is a library that implements JPEG image encoding, decoding and transcoding.|<nobr>1.3.1-foss-2015b</br>1.3.1-intel-2015b</br>1.4.0-intel-2015b</br>1.4.0-foss-2015g</br>1.4.1-foss-2015b</br>1.4.0</br>1.4.2-intel-2017.00</nobr>|
+|**[libmatheval](http://www.gnu.org/software/libmatheval/)**|GNU libmatheval is a library (callable from C and Fortran) to parse and evaluate symbolic expressions input as text.|<nobr>1.1.8-intel-2015b</br>1.1.8-foss-2015b</br>1.1.8-foss-2015g</br>1.1.8</nobr>|
+|**[libMesh](http://libmesh.github.io/)**|The libMesh library provides a framework for the numerical simulation of partial differential equations using arbitrary unstructured discretizations on serial and parallel platforms. A major goal of the library is to provide support for adaptive mesh refinement (AMR) computations in parallel while allowing a research scientist to focus on the physics they are modeling.|<nobr>0.9.5-intel-2016.01</nobr>|
+|**[libpng](http://www.libpng.org/pub/png/libpng.html)**|libpng is the official PNG reference library|<nobr>1.6.9-intel-2015b</br>1.6.9-ictce-5.5.0</br>1.6.12-intel-2015b</br>1.6.12-foss-2015b</br>1.6.12-intel-2016.01</br>1.6.12-foss-2015g</br>1.6.21-foss-2015g</br>1.6.21-foss-2015b</br>1.6.17-foss-2015b</br>1.6.12</br>1.6.21-intel-2016a</br>1.6.21-foss-2016a</br>1.6.21-intel-2017.00</br>1.6.16-intel-2015b.lua</nobr>|
+|**[libpthread-stubs](http://xcb.freedesktop.org/)**|The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility.|<nobr>0.3-intel-2015b</br>0.3-foss-2015g</br>0.3</br>0.3-intel-2016a</br>0.3-foss-2016a</nobr>|
+|**[libreadline](http://cnswww.cns.cwru.edu/php/chet/readline/rltop.html)**|The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands.|<nobr>6.2-intel-2015b</br>6.2-ictce-5.5.0</br>6.3-intel-2015b</br>6.3-GNU-5.1.0-2.25</br>6.3-ictce-7.3.5</br>6.3-foss-2015b</br>6.3-gompi-2015e</br>6.3-foss-2015g</br>6.3-intel-2016.01</br>6.3-GNU-4.9.3-2.25</br>6.3-GCCcore-4.9.3</br>6.3</br>6.3-intel-2017.00</br>6.3-intel-2016a</br>6.3-foss-2016a</br>.6.3</nobr>|
+|**[LibTIFF](http://www.remotesensing.org/libtiff/)**|tiff: Library and tools for reading and writing TIFF data files|<nobr>4.0.3-intel-2015b</br>4.0.3</nobr>|
+|**[libtool](http://www.gnu.org/software/libtool)**|GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface.|<nobr>2.4.6-GNU-5.1.0-2.25</br>2.4.2-intel-2015b</br>2.4.2-foss-2015b</br>2.4.6-GNU-4.9.3-2.25</br>2.4.2-foss-2015g</br>2.4.6-intel-2015b</br>2.4.6-GCC-4.9.3-2.25</br>2.4.6-foss-2015g</br>2.4.6-intel-2016.01</br>2.4.6</br>2.4.2</br>2.4.6-intel-2017.00</br>2.4.6-intel-2016a</br>2.4.6-foss-2016a</nobr>|
+|**[libunistring](http://www.gnu.org/software/libunistring/)**|This library provides functions for manipulating Unicode strings and for manipulating C strings according to the Unicode standard.|<nobr>0.9.3-intel-2015b</br>0.9.3-foss-2015b</br>0.9.3-foss-2015g</br>0.9.3</nobr>|
+|**[libunwind](http://www.nongnu.org/libunwind/)**|The primary goal of libunwind is to define a portable and efficient C programming interface (API) to determine the call-chain of a program. The API additionally provides the means to manipulate the preserved (callee-saved) state of each call-frame and to resume execution at any point in the call-chain (non-local goto). The API supports both local (same-process) and remote (across-process) operation. As such, the API is useful in a number of applications|<nobr>1.1-GCC-5.4.0-2.26</nobr>|
+|**[libxcb](http://xcb.freedesktop.org/)**|The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility.|<nobr>1.10-Python-2.7.8</br>1.11-intel-2015b-Python-2.7.9</br>1.11-foss-2015g-Python-2.7.9</br>1.11-Python-2.7.9</br>1.11.1-intel-2016a</br>1.11.1-foss-2016a</nobr>|
+|**[libxml2](http://xmlsoft.org/)**|Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform).|<nobr>2.9.2-intel-2015b</br>2.9.2-ictce-7.3.5</br>2.9.2-foss-2015b</br>2.9.2-GNU-5.1.0-2.25</br>2.9.2-gompi-2015e</br>2.9.2-foss-2015g</br>2.9.2-foss-2015g-Python-2.7.9</br>2.9.2-GNU-4.9.3-2.25</br>2.9.2-GCC-4.9.3-2.25</br>2.9.2</br>2.9.3-intel-2017.00</br>2.9.3-foss-2016a</br>2.9.3-intel-2016a</nobr>|
+|**libxslt**| |<nobr>1.1.28-intel-2015b.lua</nobr>|
+|**libyaml**| |<nobr>0.1.6-intel-2015b.lua</nobr>|
+|**lxml**| |<nobr>3.4.4-intel-2015b-Python-2.7.9.lua</nobr>|
+|**[OpenCoarrays](http://www.opencoarrays.org)**|OpenCoarrays is an open-source software project for developing, porting and tuning transport layers that support coarray Fortran compilers.|<nobr>1.0.0-GNU-5.1.0-2.25</br>1.0.1-GNU-5.1.0-2.25</nobr>|
+|**[PROJ](http://trac.osgeo.org/proj/)**|Program proj is a standard Unix filter function which converts geographic longitude and latitude coordinates into cartesian coordinates|<nobr>4.8.0-foss-2015b</br>4.9.2-intel-2017.00</nobr>|
+|**PyYAML**| |<nobr>3.11-intel-2015b-Python-2.7.9.lua</nobr>|
+|**[QCA](http://delta.affinix.com/qca/)**|QCA aims to provide a straightforward and cross-platform crypto API, using Qt datatypes and conventions. QCA separates the API from the implementation, using plugins known as Providers|<nobr>2.1.0-foss-2015g</nobr>|
+|**[QGIS](http://www.qgis.org)**|A Free and Open Source Geographic Information System|<nobr>2.12.3-foss-2015g</nobr>|
+|**[Qwt](http://qwt.sourceforge.net/index.html)**|The Qwt library contains GUI Components and utility classes which are primarily useful for programs with a technical background. Beside a framework for 2D plots it provides scales, sliders, dials, compasses, thermometers, wheels and knobs to control or display values, arrays, or ranges of type double.|<nobr>6.1.2-foss-2015g</nobr>|
+|**[SIONlib](http://www.fz-juelich.de/ias/jsc/EN/Expertise/Support/Software/SIONlib/_node.html)**|SIONlib is a scalable I/O library for parallel access to task-local files. The library not only supports writing and reading binary data to or from several thousands of processors into a single or a small number of physical files, but also provides global open and close functions to access SIONlib files in parallel. This package provides a stripped-down installation of SIONlib for use with performance tools (e.g., Score-P), with renamed symbols to avoid conflicts when an application using SIONlib itself is linked against a tool requiring a different SIONlib version.|<nobr>1.6.1-tools</br>1.6.1-intel-2015b-tools</nobr>|
+|**[spatialindex](https://libspatialindex.github.io/index.html)**|The purpose of this library is to provide: * An extensible framework that will support robust spatial indexing methods. * Support for sophisticated spatial queries. Range, point location, nearest neighbor and k-nearest neighbor as well as parametric queries (defined by spatial constraints) should be easy to deploy and run. * Easy to use interfaces for inserting, deleting and updating information.|<nobr>1.8.5-foss-2015g</nobr>|
+|**[SpatiaLite](https://www.gaia-gis.it/fossil/libspatialite/index)**|SpatiaLite is an open source library intended to extend the SQLite core to support fully fledged Spatial SQL capabilities.|<nobr>4.3.0a-foss-2015g</nobr>|
+|**[tbb](http://software.intel.com/en-us/articles/intel-tbb/)**|Intel Threading Building Blocks 4.0 (Intel TBB) is a widely used, award-winning C++ template library for creating reliable, portable, and scalable parallel applications. Use Intel TBB for a simple and rapid way of developing robust task-based parallel applications that scale to available processor cores, are compatible with multiple environments, and are easier to maintain. Intel TBB is the most proficient way to implement future-proof parallel applications that tap into the power and performance of multicore and manycore hardware platforms.|<nobr>4.3.5.187</br>4.4.2.152</nobr>|
+|**[zlib](http://www.zlib.net/)**|zlib is designed to be a free, general-purpose, legally unencumbered -- that is, not covered by any patents -- lossless data-compression library for use on virtually any computer hardware and operating system.|<nobr>1.2.8-GCC-5.1.0-binutils-2.25</br>1.2.7-foss-2015b</br>1.2.8-foss-2015b</br>1.2.7-intel-2015b</br>1.2.7-ictce-5.5.0</br>1.2.8-intel-2015b</br>1.2.8-GNU-5.1.0-2.25</br>1.2.8-ictce-7.3.5</br>1.2.8-gompi-2015e</br>1.2.8-GCC-4.9.3-binutils-2.25</br>1.2.8-foss-2015g</br>1.2.8-GCCcore-4.9.3</br>1.2.8-intel-2016.01</br>1.2.8-GCCcore-5.3.0</br>1.2.8-GCCcore-5.3.1-snapshot-20160419</br>1.2.8-GNU-4.9.3-2.25</br>1.2.8-GCC-4.9.3-2.25</br>1.2.8</br>1.2.8-GNU-5.1.0-2.25-intel-2015b</br>1.2.8-GCCcore-5.4.0</br>1.2.8-intel-2017.00</br>1.2.8-intel-2016a</br>1.2.8-foss-2016a</br>.1.2.8-intel-2017.00</br>1.2.8-GCCcore-6.2.0.lua</nobr>|
+
+## Math
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[FIAT](https://bitbucket.org/fenics-project/fiat)**|The FInite element Automatic Tabulator FIAT supports generation of arbitrary order instances of the Lagrange elements on lines, triangles, and tetrahedra. It is also capable of generating arbitrary order instances of Jacobi-type quadrature rules on the same element shapes.|<nobr>1.6.0-intel-2015b-Python-2.7.9</br>1.6.0-intel-2016.01-Python-2.7.9</br>1.6.0-intel-2015b-Python-2.7.11</nobr>|
+|**[GEOS](http://trac.osgeo.org/geos)**|GEOS (Geometry Engine - Open Source) is a C++ port of the Java Topology Suite (JTS)|<nobr>3.5.0-foss-2015g</nobr>|
+|**[GMP](http://gmplib.org/)**|GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers.|<nobr>5.0.5-intel-2015b</br>5.0.5-foss-2015b</br>6.0.0a-foss-2015b</br>6.0.0a-GNU-5.1.0-2.25</br>5.0.5-foss-2015g</br>6.1.0-intel-2015b</br>6.0.0a-GNU-4.9.3-2.25</br>6.1.0-GCC-4.9.3-2.25</br>6.1.0-intel-2016.01</br>5.0.5</br>6.0.0a</br>6.1.0-intel-2017.00</br>6.1.0-intel-2016a</br>6.1.0-foss-2016a</br>6.1.1-intel-2017.00</nobr>|
+|**[Harminv](http://ab-initio.mit.edu/wiki/index.php/Harminv)**|Harminv is a free program (and accompanying library) to solve the problem of harmonic inversion - given a discrete-time, finite-length signal that consists of a sum of finitely-many sinusoids (possibly exponentially decaying) in a given bandwidth, it determines the frequencies, decay constants, amplitudes, and phases of those sinusoids.|<nobr>1.4-intel-2015b</nobr>|
+|**[ISL](http://isl.gforge.inria.fr/)**|isl is a library for manipulating sets and relations of integer points bounded by linear constraints.|<nobr>0.14-GNU-5.1.0-2.25</br>0.15-GNU-4.9.3-2.25</br>0.15-GCC-4.9.3-2.25</br>0.15</nobr>|
+|**[METIS](http://glaros.dtc.umn.edu/gkhome/metis/metis/overview)**|METIS is a set of serial programs for partitioning graphs, partitioning finite element meshes, and producing fill reducing orderings for sparse matrices. The algorithms implemented in METIS are based on the multilevel recursive-bisection, multilevel k-way, and multi-constraint partitioning schemes.|<nobr>5.1.0-intel-2015b</br>5.1.0-intel-2016.01</br>5.1.0-intel-2016.01-32bitIDX</br>5.1.0-intel-2017.00</nobr>|
+|**MPC**| |<nobr>1.0.2-intel-2017.00.lua</nobr>|
+|**[MPFR](http://www.mpfr.org)**|The MPFR library is a C library for multiple-precision floating-point computations with correct rounding.|<nobr>3.1.5-intel-2017.00</nobr>|
+|**[numpy](http://www.numpy.org)**|NumPy is the fundamental package for scientific computing with Python. It contains among other things: a powerful N-dimensional array object, sophisticated (broadcasting) functions, tools for integrating C/C++ and Fortran code, useful linear algebra, Fourier transform, and random number capabilities. Besides its obvious scientific uses, NumPy can also be used as an efficient multi-dimensional container of generic data. Arbitrary data-types can be defined. This allows NumPy to seamlessly and speedily integrate with a wide variety of databases.|<nobr>1.9.1-intel-2015b-Python-2.7.9</br>1.8.2-intel-2015b-Python-2.7.9</br>1.8.2-intel-2016.01-Python-2.7.9</br>1.8.2-intel-2015b-Python-2.7.11</nobr>|
+|**[Octave](http://www.gnu.org/software/octave/)**|GNU Octave is a high-level interpreted language, primarily intended for numerical computations.|<nobr>3.8.2-intel-2015b</br>4.0.0-foss-2015g</br>3.8.2-foss-2015g</nobr>|
+|**[ParMETIS](http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview)**|ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices. ParMETIS extends the functionality provided by METIS and includes routines that are especially suited for parallel AMR computations and large scale numerical simulations. The algorithms implemented in ParMETIS are based on the parallel multilevel k-way graph-partitioning, adaptive repartitioning, and parallel multi-constrained partitioning schemes.|<nobr>4.0.3-intel-2015b</br>4.0.3-intel-2016.01</nobr>|
+|**[ScientificPython](https://sourcesup.cru.fr/projects/scientific-py/)**|ScientificPython is a collection of Python modules for scientific computing. It contains support for geometry, mathematical functions, statistics, physical units, IO, visualization, and parallelization.|<nobr>2.9.4-intel-2015b-Python-2.7.9</br>2.9.4-intel-2016.01-Python-2.7.9</br>2.9.4-intel-2015b-Python-2.7.11</nobr>|
+|**[SCOTCH](http://gforge.inria.fr/projects/scotch/)**|Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning.|<nobr>5.1.12b_esmumps-foss-2015b</br>6.0.0_esmumps-intel-2015b</br>6.0.3-intel-2015b</br>6.0.3-intel-2016.01</br>6.0.4-intel-2015b</br>6.0.4-intel-2016.01</nobr>|
+|**[sympy](http://sympy.org/)**|SymPy is a Python library for symbolic mathematics. It aims to become a full-featured computer algebra system (CAS) while keeping the code as simple as possible in order to be comprehensible and easily extensible. SymPy is written entirely in Python and does not require any external libraries.|<nobr>0.7.6-intel-2015b-Python-2.7.9</br>0.7.6-intel-2016.01-Python-2.7.9</br>0.7.6.1-intel-2015b-Python-2.7.11</nobr>|
+
+## Mpi
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[impi](http://software.intel.com/en-us/intel-mpi-library/)**|The Intel(R) MPI Library for Linux* OS is a multi-fabric message passing library based on ANL MPICH2 and OSU MVAPICH2. The Intel MPI Library for Linux OS implements the Message Passing Interface, version 2 (MPI-2) specification.|<nobr>4.1.1.036-iccifort-2013.5.192-GCC-4.8.3</br>4.1.1.036-iccifort-2013.5.192</br>5.0.3.048-iccifort-2015.3.187-GNU-5.1.0-2.25</br>5.0.3.048-iccifort-2015.3.187</br>5.0.3.048</br>5.1.1.109-iccifort-2016.0.109-GCC-4.9.3</br>5.1.2.150-iccifort-2016.1.150-GCC-4.9.3</br>5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25</br>5.1.2.150-iccifort-2016.1.150</br>2017-BETA.ENG</br>5.1.3.181-iccifort-2016.3.210-GCC-5.3.0-2.26</br>2017.0.098-iccifort-2017.0.098-GCC-5.4.0-2.26</nobr>|
+|**[MPI_NET](http://www.osl.iu.edu/research/mpi.net/)**|MPI.NET is a high-performance, easy-to-use implementation of the Message Passing Interface (MPI) for Microsoft's .NET environment|<nobr>1.2.0-gompi-2015e</br>1.2.0-intel-2016.01</nobr>|
+|**[MPICH](http://www.mpich.org/)**|MPICH v3.x is an open source high-performance MPI 3.0 implementation. It does not support InfiniBand (use MVAPICH2 with InfiniBand devices).|<nobr>3.2-GCC-5.3.0-2.25</br>3.2-GCC-5.3.1-snapshot-20160419-2.25</nobr>|
+|**mpt**| |<nobr>2.12</nobr>|
+|**[MVAPICH2](http://mvapich.cse.ohio-state.edu/overview/mvapich2/)**|This is an MPI 3.0 implementation. It is based on MPICH2 and MVICH.|<nobr>2.1-GNU-5.1.0-2.25</br>2.1-GCC-4.4.7-system</br>2.1-iccifort-2015.3.187-GNU-5.1.0-2.25</nobr>|
+|**[OpenMPI](http://www.open-mpi.org/)**|The Open MPI Project is an open source MPI-2 implementation.|<nobr>1.8.6-GNU-5.1.0-2.25</br>1.8.6-iccifort-2015.3.187-GNU-5.1.0-2.25</br>1.8.8-GNU-5.1.0-2.25</br>1.8.6-GCC-4.4.7-system</br>1.8.8-GNU-4.9.3-2.25</br>1.8.8-iccifort-2015.3.187-GNU-4.9.3-2.25</br>1.10.1-GCC-4.9.3-2.25</br>1.10.2-GCC-5.3.0-2.26</br>1.10.1-GNU-4.9.3-2.25</br>1.10.2-GCC-4.9.3-2.25</nobr>|
+
+## Numlib
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Armadillo](http://arma.sourceforge.net/)**|Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions.|<nobr>7.500.0-foss-2016a-Python-3.5.2</nobr>|
+|**[arpack-ng](http://forge.scilab.org/index.php/p/arpack-ng/)**|ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.|<nobr>3.3.0-intel-2015b</br>3.3.0-intel-2017.00</br>3.3.0-foss-2016a</br>3.4.0-intel-2017.00</nobr>|
+|**[FFTW](http://www.fftw.org)**|FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data.|<nobr>3.3.4-gompi-2015b</br>3.3.4-intel-2015b</br>2.1.5-gompi-2015b</br>2.1.5-iimpi-7.3.5-GNU-5.1.0-2.25</br>3.3.4-gompi-2015e</br>3.3.4-gompi-2015g</br>3.3.4-intel-2016.01</br>3.3.4-gompi-2016.04</br>3.3.5-intel-2016.01</br>3.3.4-gompi-2016a</br>3.3.5-foss-2016a</br>3.3.5-gompi-2016a</br>3.3.5-intel-2016a</br>3.3.5-intel-2017.00</nobr>|
+|**[GSL](http://www.gnu.org/software/gsl/)**|The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting.|<nobr>1.16-intel-2015b</nobr>|
+|**[Hypre](https://computation.llnl.gov/casc/linear_solvers/sls_hypre.html)**|Hypre is a library for solving large, sparse linear systems of equations on massively parallel computers. The problems of interest arise in the simulation codes being developed at LLNL and elsewhere to study physical phenomena in the defense, environmental, energy, and biological sciences.|<nobr>2.10.0b-intel-2015b</br>2.10.0b-intel-2016.01</br>2.10.1-intel-2015b</nobr>|
+|**[imkl](http://software.intel.com/en-us/intel-mkl/)**|Intel Math Kernel Library is a library of highly optimized, extensively threaded math routines for science, engineering, and financial applications that require maximum performance. Core math functions include BLAS, LAPACK, ScaLAPACK, Sparse Solvers, Fast Fourier Transforms, Vector Math, and more.|<nobr>11.0.5.192-iimpi-5.5.0</br>11.0.5.192-iimpi-5.5.0-GCC-4.8.3</br>11.2.3.187-iimpi-7.3.5</br>11.2.3.187-iimpi-7.3.5-GNU-5.1.0-2.25</br>11.2.3.187</br>11.3.0.109-iimpi-2016.00-GCC-4.9.3</br>11.3.1.150-iimpi-2016.00-GCC-4.9.3</br>11.3.1.150-iimpi-8.3.5</br>11.3.1.150-iimpi-2016.01-GCC-4.9.3-2.25</br>11.3.3.210-iimpi-2016.03-GCC-5.3.0-2.26</br>11.2.3.187-iompi-2015.03</br>11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25</br>2017.0.098-iimpi-2017.00-GCC-5.4.0-2.26</nobr>|
+|**[LAPACKE](http://www.netlib.org/lapack/lapacke.html)**|LAPACKE C Interface to LAPACK header files and library|<nobr>3.5.0-LAPACK-3.5.0</nobr>|
+|**[OpenBLAS](http://xianyi.github.com/OpenBLAS/)**|OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.|<nobr>0.2.14-LAPACK-3.5.0</br>0.2.14-GNU-5.1.0-2.25-LAPACK-3.5.0</br>0.2.14-gompi-2015e-LAPACK-3.5.0</br>0.2.14-GNU-4.9.3-2.25-LAPACK-3.5.0</br>0.2.18-GCC-5.3.0-2.26-LAPACK-3.6.0</br>0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0</br>0.2.19-GCC-5.4.0-2.26-LAPACK-3.6.0</nobr>|
+|**[PETSc](http://www.mcs.anl.gov/petsc)**|PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations.|<nobr>3.6.1-intel-2015b-Python-2.7.9</br>3.6.1-intel-2016.01-Python-2.7.9</br>3.6.3-intel-2015b-Python-2.7.11</nobr>|
+|**[ScaLAPACK](http://www.netlib.org/scalapack/)**|The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers.|<nobr>2.0.2-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015b-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015e-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2015g-OpenBLAS-0.2.14-LAPACK-3.5.0</br>2.0.2-gompi-2016.04-OpenBLAS-0.2.18-LAPACK-3.6.0</br>2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0</nobr>|
+|**[SuiteSparse](http://www.cise.ufl.edu/research/sparse/SuiteSparse/)**|SuiteSparse is a collection of libraries manipulate sparse matrices.|<nobr>4.4.3-intel-2015b-ParMETIS-4.0.3</br>4.4.3-intel-2016.01-ParMETIS-4.0.3</br>4.4.6-intel-2015b-ParMETIS-4.0.3</br>4.4.5-intel-2015b-METIS-5.1.0</br>4.5.3-intel-2017.00-METIS-5.1.0</nobr>|
+
+## Perf
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Advisor](https://software.intel.com/intel-advisor-xe)**|Vectorization Optimization and Thread Prototyping - Vectorize & thread code or performance “dies†- Easy workflow + data + tips = faster code faster - Prioritize, Prototype & Predict performance gain|<nobr>2016_update2</br>2017</nobr>|
+|**[Cube](http://www.scalasca.org/software/cube-4.x/download.html)**|Cube, which is used as performance report explorer for Scalasca and Score-P, is a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource. Each dimension can be represented as a tree, where non-leaf nodes of the tree can be collapsed or expanded to achieve the desired level of granularity.|<nobr>4.3.4-intel-2015b</nobr>|
+|**[ipp](http://software.intel.com/en-us/articles/intel-ipp/)**|Intel Integrated Performance Primitives (Intel IPP) is an extensive library of multicore-ready, highly optimized software functions for multimedia, data processing, and communications applications. Intel IPP offers thousands of optimized functions covering frequently used fundamental algorithms.|<nobr>9.0.1.150</nobr>|
+|**MAP**| |<nobr>4.2</br>5.0.1</nobr>|
+|**[OPARI2](http://www.score-p.org)**|OPARI2, the successor of Forschungszentrum Juelich's OPARI, is a source-to-source instrumentation tool for OpenMP and hybrid codes. It surrounds OpenMP directives and runtime library calls with calls to the POMP2 measurement interface.|<nobr>1.1.4-intel-2015b</br>2.0</nobr>|
+|**[OTF2](http://www.score-p.org)**|The Open Trace Format 2 is a highly scalable, memory efficient event trace data format plus support library. It will become the new standard trace format for Scalasca, Vampir, and Tau and is open for other tools.|<nobr>1.4-intel-2015b</br>2.0</br>2.0-intel-2015b-mic</nobr>|
+|**[PAPI](http://icl.cs.utk.edu/projects/papi/)**|PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors. PAPI enables software engineers to see, in near real time, the relation between software performance and processor events. In addition Component PAPI provides access to a collection of components that expose performance measurement opportunites across the hardware and software stack.|<nobr>5.4.0-intel-2015b</br>5.4.3</br>5.4.3-pic</br>5.4.3-intel-2015b-mic</br>5.4.0-p-mic</nobr>|
+|**perfboost**| |<nobr>1.0</nobr>|
+|**perfcatcher**| |<nobr>1.0</nobr>|
+|**PerfReports**| |<nobr>5.0.1</nobr>|
+|**perfsuite**| |<nobr>1a5.3</nobr>|
+|**[Vampir](http://www.vampir.eu)**|The Vampir software tool provides an easy-to-use framework that enables developers to quickly display and analyze arbitrary program behavior at any level of detail. The tool suite implements optimized event analysis algorithms and customizable displays that enable fast and interactive rendering of very complex performance monitoring data.|<nobr>8.5.0</br>9.0.0</nobr>|
+|**[VampirServer](http://www.vampir.eu)**|The Vampir software tool provides an easy-to-use framework that enables developers to quickly display and analyze arbitrary program behavior at any level of detail. The tool suite implements optimized event analysis algorithms and customizable displays that enable fast and interactive rendering of very complex performance monitoring data.|<nobr>8.5.0-intel-2015b</br>9.0.0-intel-2015b</nobr>|
+
+## Phys
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[Meep](http://ab-initio.mit.edu/wiki/index.php/Meep)**|Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems.|<nobr>1.3-intel-2015b</nobr>|
+|**[phono3py](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>1.11.7.8-intel-2015b-Python-2.7.9</nobr>|
+|**[phonopy](http://python.org/)**|Python is a programming language that lets you work more quickly and integrate your systems more effectively.|<nobr>1.11.6.7-intel-2015b-Python-2.7.9</nobr>|
+|**Siesta**| |<nobr>4.1-b2-intel-2017.00</nobr>|
+|**VASP**| |<nobr>5.4.1-intel-2015b-24Jun15</br>5.4.1-intel-2017.00-24Jun15</nobr>|
+
+## System
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[eudev](https://wiki.gentoo.org/wiki/Project:Eudev)**|eudev is a fork of systemd-udev with the goal of obtaining better compatibility with existing software such as OpenRC and Upstart, older kernels, various toolchains and anything else required by users and various distributions.|<nobr>3.1.5-intel-2016a</br>3.1.5-foss-2016a</nobr>|
+|**[hwloc](http://www.open-mpi.org/projects/hwloc/)**|The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information as well as the locality of I/O devices such as network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently.|<nobr>1.11.0-GNU-5.1.0-2.25</br>1.5-GCC-4.4.7-system</br>1.11.0-GNU-4.9.3-2.25</br>1.11.1-iccifort-2015.3.187-GNU-4.9.3-2.25</br>1.11.3-GCC-5.3.0-2.26</br>1.11.2-GCC-4.9.3-2.25</br>1.11.0</nobr>|
+|**[libpciaccess](http://cgit.freedesktop.org/xorg/lib/libpciaccess/)**|Generic PCI access library.|<nobr>0.13.1-foss-2015g</br>0.13.1</br>0.13.4-intel-2016a</br>0.13.4-foss-2016a</nobr>|
+
+## Toolchain
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[foss]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.|<nobr>2015e</br>2015g</br>2015b</br>2016.04</br>2016a</nobr>|
+|**[GNU](http://www.gnu.org/software/)**|Compiler-only toolchain with GCC and binutils.|<nobr>5.1.0-2.25</br>5.1.0-2.25-intel-2015b</br>4.9.3-2.25</nobr>|
+|**[gompi]((none))**|GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support.|<nobr>2015e</br>2015g</br>2015b</br>2016.04</br>2016a</nobr>|
+|**[iccifort](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel C, C++ and Fortran compilers|<nobr>2013.5.192</br>2013.5.192-GCC-4.8.3</br>2015.3.187</br>2015.3.187-GNU-5.1.0-2.25</br>2016.0.109-GCC-4.9.3</br>2016.1.150-GCC-4.9.3</br>2016.1.150-GCC-4.9.3-2.25</br>2016.1.150</br>2016.3.210-GCC-5.3.0-2.26</br>2015.3.187-GNU-4.9.3-2.25</br>2017.0.098-GCC-5.4.0-2.26</nobr>|
+|**[ictce](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL.|<nobr>5.5.0</br>7.3.5</br>8.3.5</nobr>|
+|**[iimpi](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel C/C++ and Fortran compilers, alongside Intel MPI.|<nobr>5.5.0</br>5.5.0-GCC-4.8.3</br>7.3.5</br>7.3.5-GNU-5.1.0-2.25</br>2016.00-GCC-4.9.3</br>2016.01-GCC-4.9.3</br>2016.01-GCC-4.9.3-2.25</br>8.3.5</br>2016.03-GCC-5.3.0-2.26</br>8.1.5-GCC-4.9.3-2.25</br>2017.00-GCC-5.4.0-2.26</nobr>|
+|**[intel](http://software.intel.com/en-us/intel-cluster-toolkit-compiler/)**|Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL.|<nobr>2014.06</br>2015b-intel-2015b</br>2016.00</br>2016.01</br>2015b</br>2016.03-GCC-5.3</br>2016a</br>2017.00</nobr>|
+|**[PRACE](http://www.prace-ri.eu/PRACE-Common-Production)**|The PRACE Common Production Environment (PCPE) is a set of software tools and libraries that are planned to be available on all PRACE execution sites. The PCPE also defines a set of environment variables that try to make compilation on all sites as homogeneous and simple as possible.|<nobr>20150630-intel-2015b</nobr>|
+|**[prace](http://www.prace-ri.eu/PRACE-Common-Production)**|**** PRACE Common Production Environment (PCPE) **** Initialisation of the PRACE common production environment. This allows you to assume that the following tools/libraries are available by default in your PATH/environment. * Fortran, C, C++ Compilers * MPI * BLAS, LAPACK, BLACS, ScaLAPACK * FFTW * HDF5, NetCDF The compiler commands on are: * mpif90 - Fortran compiler * mpicc - C compiler * mpicxx - C++ compiler For more information on the PCPE please see the documentation at: http://www.prace-ri.eu/PRACE-Common-Production For help using this system, please see Local User Guide available at: http://prace-ri.eu/Best-Practice-Guide-Anselm-HTML|<nobr>20160107-intel-2016.01</nobr>|
+
+## Tools
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[APR](http://apr.apache.org/)**|Apache Portable Runtime (APR) libraries.|<nobr>1.5.2-foss-2015g</br>1.5.2</nobr>|
+|**[APR-util](http://apr.apache.org/)**|Apache Portable Runtime (APR) util libraries.|<nobr>1.5.4-foss-2015g</br>1.5.4</nobr>|
+|**[Bash](http://www.gnu.org/software/bash)**|Bash is an sh-compatible command language interpreter that executes commands read from the standard input or from a file. Bash also incorporates useful features from the Korn and C shells (ksh and csh).|<nobr>4.2-intel-2015b</br>4.3</nobr>|
+|**[binutils](http://directory.fsf.org/project/binutils/)**|binutils: GNU binary utilities|<nobr>2.25</br>2.25-GCC-5.1.0-binutils-2.25</br>2.25-foss-2015b</br>2.25-GCC-4.9.3-binutils-2.25</br>2.25-GCCcore-4.9.3</br>2.25-GCCcore-5.3.0</br>2.25-GCCcore-5.3.1-snapshot-20160419</br>2.26</br>2.26-GCCcore-5.3.0</br>2.26-GCCcore-5.4.0</br>2.27.lua</br>2.27-GCCcore-6.2.0.lua</nobr>|
+|**[bzip2](http://www.bzip.org/)**|bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression.|<nobr>1.0.6-foss-2015b</br>1.0.6-intel-2015b</br>1.0.6-GNU-5.1.0-2.25</br>1.0.6-ictce-7.3.5</br>1.0.6-gompi-2015e</br>1.0.6-foss-2015g</br>1.0.6-intel-2016.01</br>1.0.6-GNU-4.9.3-2.25</br>1.0.6-GCC-4.9.3-2.25</br>1.0.6</br>1.0.6-intel-2017.00</br>1.0.6-intel-2016a</br>1.0.6-foss-2016a</nobr>|
+|**[cURL](http://curl.haxx.se)**|libcurl is a free and easy-to-use client-side URL transfer library, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMTP, SMTPS, Telnet and TFTP. libcurl supports SSL certificates, HTTP POST, HTTP PUT, FTP uploading, HTTP form based upload, proxies, cookies, user+password authentication (Basic, Digest, NTLM, Negotiate, Kerberos), file transfer resume, http proxy tunneling and more.|<nobr>7.37.1-intel-2015b</br>7.37.1-intel-2016.01</br>7.37.1-foss-2015g</br>7.45.0-foss-2015b</br>7.37.1</br>7.47.0-intel-2017.00</br>7.51.0-intel-2017.00</nobr>|
+|**[EasyBuild](http://hpcugent.github.com/easybuild/)**|EasyBuild is a software build and installation framework written in Python that allows you to install software in a structured, repeatable and robust way.|<nobr>2.4.0</br>2.5.0</br>2.7.0</br>2.9.0</br>2.8.0</br>3.0.0</br>3.0.1.lua</br>3.0.2.lua</br>2.1.1</br>2.2.0</br>2.3.0</nobr>|
+|**[expat](http://expat.sourceforge.net/)**|Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags)|<nobr>2.1.0-intel-2015b</br>2.1.0-foss-2015b</br>2.1.0-foss-2015g</br>2.1.0</br>2.1.0-intel-2017.00</nobr>|
+|**[git](http://git-scm.com/)**|Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency.|<nobr>2.8.0-GNU-4.9.3-2.25</br>2.8.0</br>2.9.2</br>2.9.0</br>2.8.0-intel-2017.00</br>2.11.0.lua</nobr>|
+|**globus**| |<nobr>globus</nobr>|
+|**[gzip](http://www.gnu.org/software/gzip/)**|gzip (GNU zip) is a popular data compression program as a replacement for compress|<nobr>1.6-intel-2015b</br>1.6-foss-2015g</br>1.6</nobr>|
+|**[HPL](http://www.netlib.org/benchmark/hpl/)**|HPL is a software package that solves a (random) dense linear system in double precision (64 bits) arithmetic on distributed-memory computers. It can thus be regarded as a portable as well as freely available implementation of the High Performance Computing Linpack Benchmark.|<nobr>2.1-intel-2015b</br>2.1-foss-2015b</nobr>|
+|**[Inspector](http://software.intel.com/en-us/intel-inspector-xe)**|Intel Inspector XE 2013 is an easy to use memory error checker and thread checker for serial and parallel applications|<nobr>2016_update1</nobr>|
+|**[itac](http://software.intel.com/en-us/intel-trace-analyzer/)**|The Intel Trace Collector is a low-overhead tracing library that performs event-based tracing in applications. The Intel Trace Analyzer provides a convenient way to monitor application activities gathered by the Intel Trace Collector through graphical displays.|<nobr>9.1.2.024</nobr>|
+|**[JOE](http://joe-editor.sourceforge.net)**|JOE is a full featured terminal-based screen editor which is distributed under the GNU General Public License (GPL)|<nobr>4.2</nobr>|
+|**[likwid](https://github.com/RRZE-HPC/likwid)**|Toolsuite of command line applications for performance oriented programmers|<nobr>4.1.2-intel</br>4.1.2-gcc</nobr>|
+|**[Lmod](http://sourceforge.net/projects/lmod/)**|Lmod is a Lua based module system. Modules allow for dynamic modification of a user's environment under Unix systems. See www.tacc.utexas.edu/tacc-projects/lmod for a complete description. Lmod is a new implementation that easily handles the MODULEPATH Hierarchical problem. It is drop-in replacement for TCL/C modules and reads TCL modulefiles directly.|<nobr>7.0.6</br>7.2.2.lua</nobr>|
+|**MATLAB**| |<nobr>2015a-COM</br>2015a-EDU</br>2015b-COM</br>2015b-EDU</nobr>|
+|**[Mercurial](http://mercurial.selenic.com/)**|Mercurial is a free, distributed source control management tool. It efficiently handles projects of any size and offers an easy and intuitive interface.|<nobr>3.5-Python-2.7.9</br>3.7.3-foss-2015g-Python-2.7.9</nobr>|
+|**[MIKE](http://www.mikepoweredbydhi.com)**|MIKE Powered by DHI is a part of DHI, the global organisation dedicated to solving challenges in water environments worldwide.|<nobr>2016</br>2014</br>2016-SP2</nobr>|
+|**[numactl](http://oss.sgi.com/projects/libnuma/)**|The numactl program allows you to run your application program on specific cpu's and memory nodes. It does this by supplying a NUMA memory policy to the operating system before running your program. The libnuma library provides convenient ways for you to add NUMA memory policies into your own program.|<nobr>2.0.10-GNU-5.1.0-2.25</br>2.0.9-GCC-4.4.7-system</br>2.0.10-GNU-4.9.3-2.25</br>2.0.10-iccifort-2015.3.187-GNU-4.9.3-2.25</br>2.0.11-GCC-5.3.0-2.26</br>2.0.11-GCC-4.9.3-2.25</br>2.0.11</br>2.0.10</nobr>|
+|**[PAPI](http://icl.cs.utk.edu/projects/papi/)**|PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors. PAPI enables software engineers to see, in near real time, the relation between software performance and processor events. In addition Component PAPI provides access to a collection of components that expose performance measurement opportunites across the hardware and software stack.|<nobr>5.4.0-mic</nobr>|
+|**[parallel](http://savannah.gnu.org/projects/parallel/)**|parallel: Build and execute shell commands in parallel|<nobr>20150322-GNU-5.1.0-2.25</br>20150322</nobr>|
+|**pigz**| |<nobr>2.3.3-GCC-6.2.0-2.27.lua</nobr>|
+|**[QEMU](http://wiki.qemu.org/Main_Page)**|QEMU is a generic and open source machine emulator and virtualizer.|<nobr>2.1.2-GCC-4.4.7-system</br>2.1.2-GCC-4.4.7-system-VDE2</nobr>|
+|**[RStudio](https://www.rstudio.com)**|RStudio is a set of integrated tools designed to help you be more productive with R. It includes a console, syntax-highlighting editor that supports direct code execution, as well as tools for plotting, history, debugging and workspace management.|<nobr>0.98.1103</nobr>|
+|**Scalasca**| |<nobr>2.3.1-intel-2015b</nobr>|
+|**Score-P**| |<nobr>3.0-intel-2015b</nobr>|
+|**[SDE](https://software.intel.com/en-us/articles/intel-software-development-emulator)**|Intel Software Development Emulator is a pintool that enables the development of applications using instruction set extensions that are not currently implemented in hardware.|<nobr>7.41.0</nobr>|
+|**[Serf](http://serf.apache.org/)**|The serf library is a high performance C-based HTTP client library built upon the Apache Portable Runtime (APR) library|<nobr>1.3.8-foss-2015g</nobr>|
+|**[Subversion](http://subversion.apache.org/)**|Subversion is an open source version control system.|<nobr>1.8.16-foss-2015g</nobr>|
+|**[Szip](http://www.hdfgroup.org/doc_resource/SZIP/)**|Szip compression software, providing lossless compression of scientific data|<nobr>2.1-foss-2015b</br>2.1-intel-2015b</br>2.1-ictce-7.3.5</br>2.1-intel-2016.01</br>2.1-foss-2015g</br>2.1</br>2.1-foss-2016a</br>2.1-intel-2017.00</nobr>|
+|**[tcsh](http://www.tcsh.org)**|Tcsh is an enhanced, but completely compatible version of the Berkeley UNIX C shell (csh). It is a command language interpreter usable both as an interactive login shell and a shell script command processor. It includes a command-line editor, programmable word completion, spelling correction, a history mechanism, job control and a C-like syntax.|<nobr>6.18.01-intel-2015b</br>6.19.00</nobr>|
+|**[turbovnc](http://www.turbovnc.org)**|TurboVNC is a derivative of VNC (Virtual Network Computing) that is tuned to provide peak performance for 3D and video workloads.|<nobr>1.2.3</nobr>|
+|**[util-linux](http://www.kernel.org/pub/linux/utils/util-linux)**|Set of Linux utilities|<nobr>2.26.1</br>2.26.1-foss-2015g</nobr>|
+|**[VDE2](http://vde.sourceforge.net)**|VDE is an ethernet compliant virtual network that can be spawned over a set of physical computer over the Internet. VDE is part of virtualsquare project.|<nobr>2.3.2-GCC-4.4.7-system</nobr>|
+|**[VirtualGL](http://www.virtualgl.org)**|VirtualGL is an open source toolkit that gives any Unix or Linux remote display software the ability to run OpenGL applications with full 3D hardware acceleration.|<nobr>2.4.1</nobr>|
+|**[VTune](http://software.intel.com/en-us/intel-vtune-amplifier-xe)**|Intel VTune Amplifier XE 2016 is the premier performance profiler for C, C++, C#, Fortran, Assembly and Java.|<nobr>2016_update1</nobr>|
+|**[Wine](https://www.winehq.org)**|Wine (originally an acronym for "Wine Is Not an Emulator") is a compatibility layer capable of running Windows applications on several POSIX-compliant operating systems, such as Linux, Mac OSX, & BSD.|<nobr>1.7.29-GNU-5.1.0-2.25</br>1.7.29-GCC-4.4.7-system</nobr>|
+|**[XZ](http://tukaani.org/xz/)**|xz: XZ utilities|<nobr>5.2.2-intel-2016.01</br>5.2.2</br>5.2.2-intel-2017.00</br>5.2.2-foss-2016a</nobr>|
+
+## Vis
+
+|Module|Description|Available versions|
+|--|--|--|
+|**[cairo](http://cairographics.org)**|Cairo is a 2D graphics library with support for multiple output devices. Currently supported output targets include the X Window System (via both Xlib and XCB), Quartz, Win32, image buffers, PostScript, PDF, and SVG file output. Experimental backends include OpenGL, BeOS, OS/2, and DirectFB|<nobr>1.12.18-foss-2015b</br>1.12.18</nobr>|
+|**[ffmpeg](https://www.ffmpeg.org/)**|A complete, cross-platform solution to record, convert and stream audio and video.|<nobr>2.4-intel-2015b</br>2.4-foss-2015g</br>2.4</nobr>|
+|**[fixesproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X.org FixesProto protocol headers.|<nobr>5.0-foss-2015g</br>5.0</br>5.0-intel-2016a</br>5.0-foss-2016a</nobr>|
+|**[FLTK](http://www.fltk.org)**|FLTK is a cross-platform C++ GUI toolkit for UNIX/Linux (X11), Microsoft Windows, and MacOS X. FLTK provides modern GUI functionality without the bloat and supports 3D graphics via OpenGL and its built-in GLUT emulation.|<nobr>1.3.2-intel-2015b</br>1.3.2</nobr>|
+|**[fontconfig](http://www.freedesktop.org/software/fontconfig)**|Fontconfig is a library designed to provide system-wide font configuration, customization and application access.|<nobr>2.11.1-intel-2015b</br>2.11.1-foss-2015b</br>2.11.1</br>2.11.94-intel-2017.00.lua</nobr>|
+|**[freetype](http://freetype.org)**|FreeType 2 is a software font engine that is designed to be small, efficient, highly customizable, and portable while capable of producing high-quality output (glyph images). It can be used in graphics libraries, display servers, font conversion tools, text image generation tools, and many other products as well.|<nobr>2.5.3-intel-2015b</br>2.5.3-foss-2015b</br>2.5.3-foss-2015g</br>2.5.3</br>2.6.2-intel-2016a</br>2.6.3-intel-2016a</br>2.6.3-foss-2016a</br>2.5.5-intel-2015b.lua</br>2.6.2-intel-2017.00.lua</nobr>|
+|**[gettext](http://www.gnu.org/software/gettext/)**|GNU `gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation|<nobr>0.19.2-intel-2015b</br>0.19.2-GNU-5.1.0-2.25</br>0.19.2-foss-2015b</br>0.19.2-intel-2016.01</br>0.19.6-foss-2015g</br>0.19.6-intel-2016.01</br>0.19.2-foss-2015g</br>0.19.2</br>0.19.6</br>0.19.7-intel-2017.00</br>0.19.6-foss-2016a</nobr>|
+|**[GLib](http://www.gtk.org/)**|GLib is one of the base libraries of the GTK+ project|<nobr>2.40.0-intel-2015b</br>2.40.0-foss-2015g</br>2.40.0-intel-2016.01</br>2.40.0</nobr>|
+|**[GPI-2](http://www.gpi-site.com/gpi2/)**|GPI-2 is an API for the development of scalable, asynchronous and fault tolerant parallel applications.|<nobr>1.1.1-gompi-2015e-MPI</br>1.1.1-gompi-2015e</nobr>|
+|**[grace](http://freecode.com/projects/grace)**|Grace is a WYSIWYG 2D plotting tool for X Windows System and Motif.|<nobr>5.1.25-intel-2015b</nobr>|
+|**[inputproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X.org InputProto protocol headers.|<nobr>2.3-intel-2015b</br>2.3-foss-2015g</br>2.3</br>2.3.1-intel-2016a</br>2.3.1-foss-2016a</nobr>|
+|**[JasPer](http://www.ece.uvic.ca/~frodo/jasper/)**|The JasPer Project is an open-source initiative to provide a free software-based reference implementation of the codec specified in the JPEG-2000 Part-1 standard.|<nobr>1.900.1-intel-2015b</nobr>|
+|**[kbproto](http://www.freedesktop.org/wiki/Software/xlibs)**|X.org KBProto protocol headers.|<nobr>1.0.6-intel-2015b</br>1.0.6-foss-2015g</br>1.0.6</br>1.0.7</br>1.0.7-intel-2016a</br>1.0.7-foss-2016a</nobr>|
+|**[libGLU](ftp://ftp.freedesktop.org/pub/mesa/glu/)**|The OpenGL Utility Library (GLU) is a computer graphics library for OpenGL.|<nobr>9.0.0-foss-2015g</nobr>|
+|**[libICE](http://www.freedesktop.org/wiki/Software/xlibs)**|X Inter-Client Exchange library for freedesktop.org|<nobr>1.0.9-intel-2015b</br>1.0.9-foss-2015g</br>1.0.9</nobr>|
+|**[libX11](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 client-side library|<nobr>1.6.2-Python-2.7.8</br>1.6.2-intel-2015b-Python-2.7.9</br>1.6.2-foss-2015g-Python-2.7.9</br>1.6.2-Python-2.7.9</br>1.6.3-intel-2016a</br>1.6.3-foss-2016a</nobr>|
+|**[libXau](http://www.freedesktop.org/wiki/Software/xlibs)**|The libXau package contains a library implementing the X11 Authorization Protocol. This is useful for restricting client access to the display.|<nobr>1.0.8-intel-2015b</br>1.0.8-foss-2015g</br>1.0.8</br>1.0.8-intel-2016a</br>1.0.8-foss-2016a</nobr>|
+|**[libXdamage](http://www.freedesktop.org/wiki/Software/xlibs)**|X Damage extension library|<nobr>1.1.4-foss-2015g-Python-2.7.9</br>1.1.4-intel-2016a</br>1.1.4-foss-2016a</nobr>|
+|**[libXdmcp](http://www.freedesktop.org/wiki/Software/xlibs)**|The libXdmcp package contains a library implementing the X Display Manager Control Protocol. This is useful for allowing clients to interact with the X Display Manager.|<nobr>1.1.2-intel-2015b</br>1.1.2-foss-2015g</br>1.1.2</br>1.1.2-intel-2016a</br>1.1.2-foss-2016a</nobr>|
+|**[libXext](http://www.freedesktop.org/wiki/Software/xlibs)**|Common X Extensions library|<nobr>1.3.2-Python-2.7.8</br>1.3.3-intel-2015b</br>1.3.3-foss-2015g-Python-2.7.9</br>1.3.3-foss-2015g</br>1.3.3</br>1.3.3-intel-2016a</br>1.3.3-foss-2016a</nobr>|
+|**[libXfixes](http://www.freedesktop.org/wiki/Software/xlibs)**|X Fixes extension library|<nobr>5.0.1-foss-2015g</br>5.0.1</br>5.0.1-intel-2016a</br>5.0.1-foss-2016a</nobr>|
+|**[libXfont](http://www.freedesktop.org/wiki/Software/xlibs)**|X font libary|<nobr>1.5.1-foss-2015g-Python-2.7.9</br>1.5.1-Python-2.7.9</br>1.5.1-intel-2016a</br>1.5.1-intel-2016a-freetype-2.6.3</br>1.5.1-foss-2016a-freetype-2.6.3</nobr>|
+|**[libXft](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 client-side library|<nobr>2.3.2-intel-2015b</nobr>|
+|**[libXinerama](http://www.freedesktop.org/wiki/Software/xlibs)**|Xinerama multiple monitor library|<nobr>1.1.3-intel-2015b</nobr>|
+|**[libXrender](http://www.freedesktop.org/wiki/Software/xlibs)**|X11 client-side library|<nobr>0.9.8-intel-2015b</br>0.9.8</nobr>|
+|**[libXt](http://www.freedesktop.org/wiki/Software/xlibs)**|libXt provides the X Toolkit Intrinsics, an abstract widget library upon which other toolkits are based. Xt is the basis for many toolkits, including the Athena widgets (Xaw), and LessTif (a Motif implementation).|<nobr>1.1.4-intel-2015b-libX11-1.6.2</br>1.1.5-foss-2015g</br>1.1.4-foss-2015g-libX11-1.6.2</br>1.1.4-libX11-1.6.2</nobr>|
+|**matplotlib**| |<nobr>1.4.3-intel-2015b-Python-2.7.9.lua</nobr>|
+|**[Mesa](http://www.mesa3d.org/)**|Mesa is an open-source implementation of the OpenGL specification - a system for rendering interactive 3D graphics.|<nobr>11.0.8-foss-2015g-Python-2.7.9</br>11.2.1-foss-2016a</nobr>|
+|**[motif](http://motif.ics.com/)**|Motif refers to both a graphical user interface (GUI) specification and the widget toolkit for building applications that follow that specification under the X Window System on Unix and other POSIX-compliant systems. It was the standard toolkit for the Common Desktop Environment and thus for Unix.|<nobr>2.3.4-intel-2015b-libX11-1.6.2</br>2.3.4-foss-2015g-libX11-1.6.2</nobr>|
+|**[OpenCV](http://opencv.org/)**|OpenCV (Open Source Computer Vision Library) is an open source computer vision and machine learning software library. OpenCV was built to provide a common infrastructure for computer vision applications and to accelerate the use of machine perception in the commercial products.|<nobr>2.4.9-intel-2015b</br>3.0.0-intel-2015b</nobr>|
+|**[OpenDX](http://www.opendx.org)**|Open source visualization software package based on IBM's Visualization Data Explorer.|<nobr>4.4.4-foss-2015g</nobr>|
+|**[OSPRay](http://www.ospray.org)**|A Ray Tracing Based Rendering Engine for High-Fidelity Visualization|<nobr>0.9.1</nobr>|
+|**[p4vasp](http://www.p4vasp.at)**|p4vasp is a visualization suite for the Vienna Ab-initio Simulation Package (VASP). It contains an extensible GUI framework, that can be used to view material structure, density of states, band-structure and more.|<nobr>0.3.29-GNU-4.9.3-2.25</nobr>|
+|**[ParaView](http://www.paraview.org)**|ParaView is a scientific parallel visualizer.|<nobr>4.3-OSPRay</br>5.0.0-binary</nobr>|
+|**[pixman](http://www.pixman.org/)**|Pixman is a low-level software library for pixel manipulation, providing features such as image compositing and trapezoid rasterization. Important users of pixman are the cairo graphics library and the X server.|<nobr>0.32.6-intel-2015b</br>0.32.6-foss-2015b</br>0.32.6</nobr>|
+|**[PyQt](http://www.riverbankcomputing.co.uk/software/pyqt)**|PyQt is a set of Python v2 and v3 bindings for Digia's Qt application framework.|<nobr>4.11.3-foss-2015g-Python-2.7.9</br>4.11.4-foss-2015g-Python-2.7.9</nobr>|
+|**[SUMO](http://www.sumo.dlr.de/wiki/Main_Page)**|Simulation of Urban MObility (SUMO) is an open source, highly portable, microscopic and continuous road traffic simulation package designed to handle large road networks.|<nobr>0.25.0-foss-2015g</br>0.26.0-foss-2015g</br>0.27.1-foss-2015g</nobr>|
+|**[Tk](http://www.tcl.tk/)**|Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages.|<nobr>8.5.12-intel-2015b</br>8.6.4-intel-2015b-no-X11</br>8.6.4-GNU-4.9.3-2.25-no-X11</br>8.6.4-GCC-4.9.3-2.25-no-X11</br>8.6.4-foss-2015b-no-X11</br>8.6.4-foss-2015g-no-X11</br>8.6.4-intel-2016.01-no-X11</br>8.6.4-no-X11</br>8.5.12</br>8.6.3</br>8.6.4-intel-2017.00-no-X11</br>8.6.4-intel-2016a-no-X11</br>8.6.4-foss-2016a-no-X11</nobr>|
+|**[VisIt](https://wci.llnl.gov/simulation/computer-codes/visit)**|VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool|<nobr>2.10.0</nobr>|
diff --git a/get_cvs.sh b/get_cvs.sh
new file mode 100755
index 0000000000000000000000000000000000000000..d6881b68e89446517c3df447b6bea4756cb6ae8b
--- /dev/null
+++ b/get_cvs.sh
@@ -0,0 +1,4 @@
+#!/bin/bash
+curl -s https://code.it4i.cz/hrb33/modules-anselm/raw/master/anselm.csv -o modules-anselm.csv
+curl -s https://code.it4i.cz/hrb33/modules-salomon/raw/master/salomon.csv -o modules-salomon.csv
+#curl -s https://code.it4i.cz/hrb33/modules-salomon/raw/master/salomon-uv.csv -o modules-salomon-uv.csv
diff --git a/material/404.html b/material/404.html
new file mode 100644
index 0000000000000000000000000000000000000000..67cfc1126d7185708107ec9370b36bbadbbe88d3
--- /dev/null
+++ b/material/404.html
@@ -0,0 +1,4 @@
+{% extends "main.html" %}
+{% block content %}
+ <h1>404 - Not found</h1>
+{% endblock %}
diff --git a/material/__init__.py b/material/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/material/assets/fonts/icon.eot b/material/assets/fonts/icon.eot
deleted file mode 100755
index 8f81638c2de436e1b5cc77b6a2693b2b347a0151..0000000000000000000000000000000000000000
Binary files a/material/assets/fonts/icon.eot and /dev/null differ
diff --git a/material/assets/fonts/icon.svg b/material/assets/fonts/icon.svg
deleted file mode 100755
index 86250e7b40ca0ff81476828e007118b2dfd727db..0000000000000000000000000000000000000000
--- a/material/assets/fonts/icon.svg
+++ /dev/null
@@ -1,22 +0,0 @@
-<?xml version="1.0" standalone="no"?>
-<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd" >
-<svg xmlns="http://www.w3.org/2000/svg">
-<metadata>Generated by IcoMoon</metadata>
-<defs>
-<font id="icon" horiz-adv-x="1024">
-<font-face units-per-em="1024" ascent="960" descent="-64" />
-<missing-glyph horiz-adv-x="1024" />
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+ *
+ * @codingstandard ftlabs-jsv2
+ * @copyright The Financial Times Limited [All Rights Reserved]
+ * @license MIT License (see LICENSE.txt)
+ */
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t=this;this.el_.checked?(this.offset_=window.pageYOffset,setTimeout(function(){window.scrollTo(0,0),t.el_.checked&&(document.body.dataset.mdState="lock")},400)):(document.body.dataset.mdState="",setTimeout(function(){"undefined"!=typeof t.offset_&&window.scrollTo(0,t.offset_)},100))}},{key:"reset",value:function(){"lock"===document.body.dataset.mdState&&window.scrollTo(0,this.offset_),document.body.dataset.mdState=""}}]),t}();e.default=o,t.exports=e.default},function(t,e,n){(function(r){"use strict";function o(t){return t&&t.__esModule?t:{default:t}}function i(t,e){if(!(t instanceof e))throw new TypeError("Cannot call a class as a function")}Object.defineProperty(e,"__esModule",{value:!0});var s=function(){function t(t,e){var n=[],r=!0,o=!1,i=void 0;try{for(var s,a=t[Symbol.iterator]();!(r=(s=a.next()).done)&&(n.push(s.value),!e||n.length!==e);r=!0);}catch(t){o=!0,i=t}finally{try{!r&&a.return&&a.return()}finally{if(o)throw i}}return n}return function(e,n){if(Array.isArray(e))return 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e=this;if("focus"!==t.type||this.index_){if("keyup"===t.type){for(;this.list_.firstChild;)this.list_.removeChild(this.list_.firstChild);var n=this.index_.search(t.target.value);n.forEach(function(t){var n=e.data_[t.ref],o=n.location.split("#"),i=s(o,1),a=i[0];a=a.replace(/^(\/?\.{2})+/g,""),e.list_.appendChild(r.createElement("li",{class:"md-search-result__item"},r.createElement("a",{href:n.location,title:n.title,class:"md-search-result__link","data-md-rel":a===document.location.pathname?"anchor":""},r.createElement("article",{class:"md-search-result__article"},r.createElement("h1",{class:"md-search-result__title"},n.title),r.createElement("p",{class:"md-search-result__teaser"},e.truncate_(n.text,140))))))});var o=this.list_.querySelectorAll("[data-md-rel=anchor]");Array.prototype.forEach.call(o,function(t){t.addEventListener("click",function(e){var n=document.querySelector("[data-md-toggle=search]");n.checked&&(n.checked=!1,n.dispatchEvent(new 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+ * lunr.utils
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.utils={},i.utils.warn=function(t){return function(e){t.console&&console.warn&&console.warn(e)}}(this),i.utils.asString=function(t){return void 0===t||null===t?"":t.toString()},/*!
+ * lunr.EventEmitter
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.EventEmitter=function(){this.events={}},i.EventEmitter.prototype.addListener=function(){var t=Array.prototype.slice.call(arguments),e=t.pop(),n=t;if("function"!=typeof e)throw new TypeError("last argument must be a function");n.forEach(function(t){this.hasHandler(t)||(this.events[t]=[]),this.events[t].push(e)},this)},i.EventEmitter.prototype.removeListener=function(t,e){if(this.hasHandler(t)){var n=this.events[t].indexOf(e);this.events[t].splice(n,1),this.events[t].length||delete this.events[t]}},i.EventEmitter.prototype.emit=function(t){if(this.hasHandler(t)){var e=Array.prototype.slice.call(arguments,1);this.events[t].forEach(function(t){t.apply(void 0,e)})}},i.EventEmitter.prototype.hasHandler=function(t){return t in this.events},/*!
+ * lunr.tokenizer
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.tokenizer=function(t){if(!arguments.length||null==t||void 0==t)return[];if(Array.isArray(t))return t.map(function(t){return i.utils.asString(t).toLowerCase()});var e=i.tokenizer.seperator||i.tokenizer.separator;return t.toString().trim().toLowerCase().split(e)},i.tokenizer.seperator=!1,i.tokenizer.separator=/[\s\-]+/,i.tokenizer.load=function(t){var e=this.registeredFunctions[t];if(!e)throw new Error("Cannot load un-registered function: "+t);return e},i.tokenizer.label="default",i.tokenizer.registeredFunctions={default:i.tokenizer},i.tokenizer.registerFunction=function(t,e){e in this.registeredFunctions&&i.utils.warn("Overwriting existing tokenizer: "+e),t.label=e,this.registeredFunctions[e]=t},/*!
+ * lunr.Pipeline
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.Pipeline=function(){this._stack=[]},i.Pipeline.registeredFunctions={},i.Pipeline.registerFunction=function(t,e){e in this.registeredFunctions&&i.utils.warn("Overwriting existing registered function: "+e),t.label=e,i.Pipeline.registeredFunctions[t.label]=t},i.Pipeline.warnIfFunctionNotRegistered=function(t){var e=t.label&&t.label in this.registeredFunctions;e||i.utils.warn("Function is not registered with pipeline. This may cause problems when serialising the index.\n",t)},i.Pipeline.load=function(t){var e=new i.Pipeline;return t.forEach(function(t){var n=i.Pipeline.registeredFunctions[t];if(!n)throw new Error("Cannot load un-registered function: "+t);e.add(n)}),e},i.Pipeline.prototype.add=function(){var t=Array.prototype.slice.call(arguments);t.forEach(function(t){i.Pipeline.warnIfFunctionNotRegistered(t),this._stack.push(t)},this)},i.Pipeline.prototype.after=function(t,e){i.Pipeline.warnIfFunctionNotRegistered(e);var n=this._stack.indexOf(t);if(n==-1)throw new Error("Cannot find existingFn");n+=1,this._stack.splice(n,0,e)},i.Pipeline.prototype.before=function(t,e){i.Pipeline.warnIfFunctionNotRegistered(e);var n=this._stack.indexOf(t);if(n==-1)throw new Error("Cannot find existingFn");this._stack.splice(n,0,e)},i.Pipeline.prototype.remove=function(t){var e=this._stack.indexOf(t);e!=-1&&this._stack.splice(e,1)},i.Pipeline.prototype.run=function(t){for(var e=[],n=t.length,r=this._stack.length,o=0;o<n;o++){for(var i=t[o],s=0;s<r&&(i=this._stack[s](i,o,t),void 0!==i&&""!==i);s++);void 0!==i&&""!==i&&e.push(i)}return e},i.Pipeline.prototype.reset=function(){this._stack=[]},i.Pipeline.prototype.toJSON=function(){return this._stack.map(function(t){return i.Pipeline.warnIfFunctionNotRegistered(t),t.label})},/*!
+ * lunr.Vector
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.Vector=function(){this._magnitude=null,this.list=void 0,this.length=0},i.Vector.Node=function(t,e,n){this.idx=t,this.val=e,this.next=n},i.Vector.prototype.insert=function(t,e){this._magnitude=void 0;var n=this.list;if(!n)return this.list=new i.Vector.Node(t,e,n),this.length++;if(t<n.idx)return this.list=new i.Vector.Node(t,e,n),this.length++;for(var r=n,o=n.next;void 0!=o;){if(t<o.idx)return r.next=new i.Vector.Node(t,e,o),this.length++;r=o,o=o.next}return r.next=new i.Vector.Node(t,e,o),this.length++},i.Vector.prototype.magnitude=function(){if(this._magnitude)return this._magnitude;for(var t,e=this.list,n=0;e;)t=e.val,n+=t*t,e=e.next;return this._magnitude=Math.sqrt(n)},i.Vector.prototype.dot=function(t){for(var e=this.list,n=t.list,r=0;e&&n;)e.idx<n.idx?e=e.next:e.idx>n.idx?n=n.next:(r+=e.val*n.val,e=e.next,n=n.next);return r},i.Vector.prototype.similarity=function(t){return this.dot(t)/(this.magnitude()*t.magnitude())},/*!
+ * lunr.SortedSet
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.SortedSet=function(){this.length=0,this.elements=[]},i.SortedSet.load=function(t){var e=new this;return e.elements=t,e.length=t.length,e},i.SortedSet.prototype.add=function(){var t,e;for(t=0;t<arguments.length;t++)e=arguments[t],~this.indexOf(e)||this.elements.splice(this.locationFor(e),0,e);this.length=this.elements.length},i.SortedSet.prototype.toArray=function(){return this.elements.slice()},i.SortedSet.prototype.map=function(t,e){return this.elements.map(t,e)},i.SortedSet.prototype.forEach=function(t,e){return this.elements.forEach(t,e)},i.SortedSet.prototype.indexOf=function(t){for(var e=0,n=this.elements.length,r=n-e,o=e+Math.floor(r/2),i=this.elements[o];r>1;){if(i===t)return o;i<t&&(e=o),i>t&&(n=o),r=n-e,o=e+Math.floor(r/2),i=this.elements[o]}return i===t?o:-1},i.SortedSet.prototype.locationFor=function(t){for(var e=0,n=this.elements.length,r=n-e,o=e+Math.floor(r/2),i=this.elements[o];r>1;)i<t&&(e=o),i>t&&(n=o),r=n-e,o=e+Math.floor(r/2),i=this.elements[o];return i>t?o:i<t?o+1:void 0},i.SortedSet.prototype.intersect=function(t){for(var e=new i.SortedSet,n=0,r=0,o=this.length,s=t.length,a=this.elements,u=t.elements;;){if(n>o-1||r>s-1)break;a[n]!==u[r]?a[n]<u[r]?n++:a[n]>u[r]&&r++:(e.add(a[n]),n++,r++)}return e},i.SortedSet.prototype.clone=function(){var t=new i.SortedSet;return t.elements=this.toArray(),t.length=t.elements.length,t},i.SortedSet.prototype.union=function(t){var e,n,r;this.length>=t.length?(e=this,n=t):(e=t,n=this),r=e.clone();for(var o=0,i=n.toArray();o<i.length;o++)r.add(i[o]);return r},i.SortedSet.prototype.toJSON=function(){return this.toArray()},/*!
+ * lunr.Index
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.Index=function(){this._fields=[],this._ref="id",this.pipeline=new i.Pipeline,this.documentStore=new i.Store,this.tokenStore=new i.TokenStore,this.corpusTokens=new i.SortedSet,this.eventEmitter=new i.EventEmitter,this.tokenizerFn=i.tokenizer,this._idfCache={},this.on("add","remove","update",function(){this._idfCache={}}.bind(this))},i.Index.prototype.on=function(){var t=Array.prototype.slice.call(arguments);return this.eventEmitter.addListener.apply(this.eventEmitter,t)},i.Index.prototype.off=function(t,e){return this.eventEmitter.removeListener(t,e)},i.Index.load=function(t){t.version!==i.version&&i.utils.warn("version mismatch: current "+i.version+" importing "+t.version);var e=new this;return e._fields=t.fields,e._ref=t.ref,e.tokenizer(i.tokenizer.load(t.tokenizer)),e.documentStore=i.Store.load(t.documentStore),e.tokenStore=i.TokenStore.load(t.tokenStore),e.corpusTokens=i.SortedSet.load(t.corpusTokens),e.pipeline=i.Pipeline.load(t.pipeline),e},i.Index.prototype.field=function(t,e){var e=e||{},n={name:t,boost:e.boost||1};return this._fields.push(n),this},i.Index.prototype.ref=function(t){return this._ref=t,this},i.Index.prototype.tokenizer=function(t){var e=t.label&&t.label in i.tokenizer.registeredFunctions;return e||i.utils.warn("Function is not a registered tokenizer. This may cause problems when serialising the index"),this.tokenizerFn=t,this},i.Index.prototype.add=function(t,e){var n={},r=new i.SortedSet,o=t[this._ref],e=void 0===e||e;this._fields.forEach(function(e){var o=this.pipeline.run(this.tokenizerFn(t[e.name]));n[e.name]=o;for(var i=0;i<o.length;i++){var s=o[i];r.add(s),this.corpusTokens.add(s)}},this),this.documentStore.set(o,r);for(var s=0;s<r.length;s++){for(var a=r.elements[s],u=0,c=0;c<this._fields.length;c++){var l=this._fields[c],f=n[l.name],d=f.length;if(d){for(var h=0,p=0;p<d;p++)f[p]===a&&h++;u+=h/d*l.boost}}this.tokenStore.add(a,{ref:o,tf:u})}e&&this.eventEmitter.emit("add",t,this)},i.Index.prototype.remove=function(t,e){var n=t[this._ref],e=void 0===e||e;if(this.documentStore.has(n)){var r=this.documentStore.get(n);this.documentStore.remove(n),r.forEach(function(t){this.tokenStore.remove(t,n)},this),e&&this.eventEmitter.emit("remove",t,this)}},i.Index.prototype.update=function(t,e){var e=void 0===e||e;this.remove(t,!1),this.add(t,!1),e&&this.eventEmitter.emit("update",t,this)},i.Index.prototype.idf=function(t){var e="@"+t;if(Object.prototype.hasOwnProperty.call(this._idfCache,e))return this._idfCache[e];var n=this.tokenStore.count(t),r=1;return n>0&&(r=1+Math.log(this.documentStore.length/n)),this._idfCache[e]=r},i.Index.prototype.search=function(t){var e=this.pipeline.run(this.tokenizerFn(t)),n=new i.Vector,r=[],o=this._fields.reduce(function(t,e){return t+e.boost},0),s=e.some(function(t){return this.tokenStore.has(t)},this);if(!s)return[];e.forEach(function(t,e,s){var a=1/s.length*this._fields.length*o,u=this,c=this.tokenStore.expand(t).reduce(function(e,r){var o=u.corpusTokens.indexOf(r),s=u.idf(r),c=1,l=new i.SortedSet;if(r!==t){var f=Math.max(3,r.length-t.length);c=1/Math.log(f)}o>-1&&n.insert(o,a*s*c);for(var d=u.tokenStore.get(r),h=Object.keys(d),p=h.length,v=0;v<p;v++)l.add(d[h[v]].ref);return e.union(l)},new i.SortedSet);r.push(c)},this);var a=r.reduce(function(t,e){return t.intersect(e)});return a.map(function(t){return{ref:t,score:n.similarity(this.documentVector(t))}},this).sort(function(t,e){return e.score-t.score})},i.Index.prototype.documentVector=function(t){for(var e=this.documentStore.get(t),n=e.length,r=new i.Vector,o=0;o<n;o++){var s=e.elements[o],a=this.tokenStore.get(s)[t].tf,u=this.idf(s);r.insert(this.corpusTokens.indexOf(s),a*u)}return r},i.Index.prototype.toJSON=function(){return{version:i.version,fields:this._fields,ref:this._ref,tokenizer:this.tokenizerFn.label,documentStore:this.documentStore.toJSON(),tokenStore:this.tokenStore.toJSON(),corpusTokens:this.corpusTokens.toJSON(),pipeline:this.pipeline.toJSON()}},i.Index.prototype.use=function(t){var e=Array.prototype.slice.call(arguments,1);e.unshift(this),t.apply(this,e)},/*!
+ * lunr.Store
+ * Copyright (C) 2016 Oliver Nightingale
+ */
+i.Store=function(){this.store={},this.length=0},i.Store.load=function(t){var e=new this;return e.length=t.length,e.store=Object.keys(t.store).reduce(function(e,n){return e[n]=i.SortedSet.load(t.store[n]),e},{}),e},i.Store.prototype.set=function(t,e){this.has(t)||this.length++,this.store[t]=e},i.Store.prototype.get=function(t){return this.store[t]},i.Store.prototype.has=function(t){return t in this.store},i.Store.prototype.remove=function(t){this.has(t)&&(delete this.store[t],this.length--)},i.Store.prototype.toJSON=function(){return{store:this.store,length:this.length}},/*!
+ * lunr.stemmer
+ * Copyright (C) 2016 Oliver Nightingale
+ * Includes code from - http://tartarus.org/~martin/PorterStemmer/js.txt
+ */
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diff --git a/material/assets/stylesheets/application-02ce7adcc2.palette.css b/material/assets/stylesheets/application-02ce7adcc2.palette.css
new file mode 100644
index 0000000000000000000000000000000000000000..2195a9f4aed7537e9468239eb5136aaef75ec102
--- /dev/null
+++ b/material/assets/stylesheets/application-02ce7adcc2.palette.css
@@ -0,0 +1 @@
+button[data-md-color-accent],button[data-md-color-primary]{width:13rem;margin-bottom:.4rem;padding:2.4rem .8rem .4rem;-webkit-transition:background-color .25s,opacity .25s;transition:background-color .25s,opacity .25s;border-radius:.2rem;color:#fff;font-size:1.28rem;text-align:left;cursor:pointer}button[data-md-color-accent]:hover,button[data-md-color-primary]:hover{opacity:.75}button[data-md-color-primary=red]{background-color:#ef5350}[data-md-color-primary=red] .md-typeset a{color:#ef5350}[data-md-color-primary=red] .md-header{background-color:#ef5350}[data-md-color-primary=red] .md-nav__link--active,[data-md-color-primary=red] .md-nav__link:active{color:#ef5350}button[data-md-color-primary=pink]{background-color:#e91e63}[data-md-color-primary=pink] .md-typeset a{color:#e91e63}[data-md-color-primary=pink] .md-header{background-color:#e91e63}[data-md-color-primary=pink] .md-nav__link--active,[data-md-color-primary=pink] 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a:active,[data-md-color-accent=purple] .md-typeset a:hover{color:#e040fb}[data-md-color-accent=purple] .md-typeset .codehilite::-webkit-scrollbar-thumb:hover,[data-md-color-accent=purple] .md-typeset pre::-webkit-scrollbar-thumb:hover{background-color:#e040fb}[data-md-color-accent=purple] .md-nav__link:hover,[data-md-color-accent=purple] .md-typeset .footnote li:hover .footnote-backref:hover,[data-md-color-accent=purple] .md-typeset .footnote li:target .footnote-backref,[data-md-color-accent=purple] .md-typeset [id] .headerlink:focus,[data-md-color-accent=purple] .md-typeset [id]:hover .headerlink:hover,[data-md-color-accent=purple] .md-typeset [id]:target .headerlink{color:#e040fb}[data-md-color-accent=purple] .md-search__scrollwrap::-webkit-scrollbar-thumb:hover{background-color:#e040fb}[data-md-color-accent=purple] .md-search-result__link:hover{background-color:rgba(224,64,251,.1)}[data-md-color-accent=purple] 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diff --git a/material/assets/stylesheets/application.css b/material/assets/stylesheets/application.css
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a{background:#7c4dff}.palette-accent-indigo .article a:focus,.palette-accent-indigo .article a:hover{color:#536dfe}.palette-accent-indigo .repo a{background:#536dfe}.palette-accent-blue .article a:focus,.palette-accent-blue .article a:hover{color:#6889ff}.palette-accent-blue .repo a{background:#6889ff}.palette-accent-light-blue .article a:focus,.palette-accent-light-blue .article a:hover{color:#0091ea}.palette-accent-light-blue .repo a{background:#0091ea}.palette-accent-cyan .article a:focus,.palette-accent-cyan .article a:hover{color:#00b8d4}.palette-accent-cyan .repo a{background:#00b8d4}.palette-accent-teal .article a:focus,.palette-accent-teal .article a:hover{color:#00bfa5}.palette-accent-teal .repo a{background:#00bfa5}.palette-accent-green .article a:focus,.palette-accent-green .article a:hover{color:#12c700}.palette-accent-green .repo a{background:#12c700}.palette-accent-light-green .article a:focus,.palette-accent-light-green .article a:hover{color:#64dd17}.palette-accent-light-green .repo a{background:#64dd17}.palette-accent-lime .article a:focus,.palette-accent-lime .article a:hover{color:#aeea00}.palette-accent-lime .repo a{background:#aeea00}.palette-accent-yellow .article a:focus,.palette-accent-yellow .article a:hover{color:#ffd600}.palette-accent-yellow .repo a{background:#ffd600}.palette-accent-amber .article a:focus,.palette-accent-amber .article a:hover{color:#ffab00}.palette-accent-amber .repo a{background:#ffab00}.palette-accent-orange .article a:focus,.palette-accent-orange .article a:hover{color:#ff9100}.palette-accent-orange .repo a{background:#ff9100}.palette-accent-deep-orange .article a:focus,.palette-accent-deep-orange .article a:hover{color:#ff6e40}.palette-accent-deep-orange .repo a{background:#ff6e40}@media only screen and (max-width:959px){.palette-primary-red .project{background:#e84e40}.palette-primary-pink .project{background:#e91e63}.palette-primary-purple .project{background:#ab47bc}.palette-primary-deep-purple .project{background:#7e57c2}.palette-primary-indigo .project{background:#3f51b5}.palette-primary-blue .project{background:#5677fc}.palette-primary-light-blue .project{background:#03a9f4}.palette-primary-cyan .project{background:#00bcd4}.palette-primary-teal .project{background:#009688}.palette-primary-green .project{background:#259b24}.palette-primary-light-green .project{background:#7cb342}.palette-primary-lime .project{background:#c0ca33}.palette-primary-yellow .project{background:#f9a825}.palette-primary-amber .project{background:#ffb300}.palette-primary-orange .project{background:#fb8c00}.palette-primary-deep-orange .project{background:#ff7043}.palette-primary-brown .project{background:#795548}.palette-primary-grey .project{background:#757575}.palette-primary-blue-grey .project{background:#546e7a}}
\ No newline at end of file
diff --git a/material/base.html b/material/base.html
index 340e7aa593cd4c70e45101c4a39227c2461c08fa..046e7d67dbf7491c0af00d69c71f1cf029d148a2 100644
--- a/material/base.html
+++ b/material/base.html
@@ -1,180 +1,139 @@
+{% import "partials/language.html" as lang %}
<!DOCTYPE html>
-<!--[if lt IE 7 ]><html class="no-js ie6"><![endif]-->
-<!--[if IE 7 ]><html class="no-js ie7"><![endif]-->
-<!--[if IE 8 ]><html class="no-js ie8"><![endif]-->
-<!--[if IE 9 ]><html class="no-js ie9"><![endif]-->
-<!--[if (gt IE 9)|!(IE)]><!--> <html class="no-js"> <!--<![endif]-->
+<html class="no-js">
<head>
- <meta charset="utf-8">
- <meta name="viewport" content="width=device-width,user-scalable=no,initial-scale=1,maximum-scale=1">
- {% block htmltitle %}
- {% if page_title %}
- <title>{{ page_title }} - {{ site_name }}</title>
- {% elif page_description %}
- <title>{{ site_name }} - {{ page_description }}</title>
+ {% block site_meta %}
+ <meta charset="utf-8">
+ <meta name="viewport" content="width=device-width,initial-scale=1">
+ {% if config.site_description %}
+ <meta name="description" content="{{ config.site_description }}">
+ {% endif %}
+ {% if page.canonical_url %}
+ <link rel="canonical" href="{{ page.canonical_url }}">
+ {% endif %}
+ {% if config.site_author %}
+ <meta name="author" content="{{ config.site_author }}">
+ {% endif %}
+ {% if config.site_favicon %}
+ <link rel="shortcut icon" href="{{ base_url }}/{{ config.site_favicon }}">
{% else %}
- <title>{{ site_name }}</title>
+ <link rel="shortcut icon" href="{{ base_url }}/assets/images/favicon.ico">
{% endif %}
- {% if page_description %}
- <meta name="description" content="{{ page_description }}">
+ <meta name="generator" content="mkdocs+mkdocs-material#1.0.2">
+ {% endblock %}
+ {% block htmltitle %}
+ {% if page.title %}
+ <title>{{ page.title }} - {{ config.site_name }}</title>
+ {% elif config.site_description %}
+ <title>{{ config.site_name }} - {{ config.site_description }}</title>
+ {% else %}
+ <title>{{ config.site_name }}</title>
{% endif %}
- {% if canonical_url %}
- <link rel="canonical" href="{{ canonical_url }}">
+ {% endblock %}
+ {% block libs %}
+ <script src="{{ base_url }}/assets/javascripts/modernizr-facb31f4a3.js"></script>
+ {% endblock %}
+ {% block fonts %}
+ {% if config.extra.font != "none" %}
+ {% set text = config.extra.get("font", {}).text | default("Roboto") %}
+ {% set code = config.extra.get("font", {}).code
+ | default("Roboto Mono") %}
+ {% set font = text + ':300,400,400i,700|' + code | replace(' ', '+') %}
+ <link rel="stylesheet" href="https://fonts.googleapis.com/css?family={{ font }}">
+ <style>body,input{font-family:"{{ text }}","Helvetica Neue",Helvetica,Arial,sans-serif}code,kbd,pre{font-family:"{{ code }}","Courier New",Courier,monospace}</style>
{% endif %}
- {% if site_author %}
- <meta name="author" content="{{ site_author }}">
+ <link rel="stylesheet" href="https://fonts.googleapis.com/icon?family=Material+Icons">
+ {% endblock %}
+ {% block styles %}
+ <link rel="stylesheet" href="{{ base_url }}/assets/stylesheets/application-f3ab63f78a.css">
+ {% if config.extra.palette %}
+ <link rel="stylesheet" href="{{ base_url }}/assets/stylesheets/application-02ce7adcc2.palette.css">
{% endif %}
+ {% for path in extra_css %}
+ <link rel="stylesheet" href="{{ path }}">
+ {% endfor %}
{% endblock %}
- <meta property="og:url" content="{{ canonical_url }}">
- <meta property="og:title" content="{{ site_name }}">
- <meta property="og:image" content="{{ canonical_url }}/{{ base_url }}/{{ config.extra.logo }}">
- <meta name="apple-mobile-web-app-title" content="{{ site_name }}">
- <meta name="apple-mobile-web-app-capable" content="yes">
- <meta name="apple-mobile-web-app-status-bar-style" content="black-translucent">
- {% if config.extra.logo %}
- <link rel="apple-touch-icon" href="{{ base_url }}/{{ config.extra.logo }}">
- {% endif %}
- {% set favicon = favicon | default("assets/images/favicon-e565ddfa3b.ico", true) %}
- <link rel="shortcut icon" type="image/x-icon" href="{{ base_url }}/{{ favicon }}">
- <link rel="icon" type="image/x-icon" href="{{ base_url }}/{{ favicon }}">
- <style>
- @font-face {
- font-family: 'Icon';
- src: url('{{ base_url }}/assets/fonts/icon.eot?52m981');
- src: url('{{ base_url }}/assets/fonts/icon.eot?#iefix52m981')
- format('embedded-opentype'),
- url('{{ base_url }}/assets/fonts/icon.woff?52m981')
- format('woff'),
- url('{{ base_url }}/assets/fonts/icon.ttf?52m981')
- format('truetype'),
- url('{{ base_url }}/assets/fonts/icon.svg?52m981#icon')
- format('svg');
- font-weight: normal;
- font-style: normal;
- }
- </style>
- <link rel="stylesheet" href="{{ base_url }}/assets/stylesheets/application-a422ff04cc.css">
- {% if config.extra.palette %}
- <link rel="stylesheet" href="{{ base_url }}/assets/stylesheets/palettes-05ab2406df.css">
- {% endif %}
- {% if config.extra.font != "none" %}
- {% set text = config.extra.get("font", {}).text | default("Ubuntu") %}
- {% set code = config.extra.get("font", {}).code | default("Ubuntu Mono") %}
- {% set font = text + ':400,700|' + code | replace(' ', '+') %}
- <link rel="stylesheet" href="https://fonts.googleapis.com/css?family={{ font }}">
- <style>
- body, input {
- font-family: '{{ text }}', Helvetica, Arial, sans-serif;
- }
- pre, code {
- font-family: '{{ code }}', 'Courier New', 'Courier', monospace;
- }
- </style>
- {% endif %}
- {% for path in extra_css %}
- <link rel="stylesheet" href="{{ path }}">
- {% endfor %}
- <script src="{{ base_url }}/assets/javascripts/modernizr-4ab42b99fd.js"></script>
{% block extrahead %}{% endblock %}
</head>
{% set palette = config.extra.get("palette", {}) %}
- {% set primary = palette.primary | replace(' ', '-') | lower %}
- {% set accent = palette.accent | replace(' ', '-') | lower %}
- <body class="{% if primary %}palette-primary-{{ primary }}{% endif %} {% if accent %}palette-accent-{{ accent }}{% endif %}">
- {% if repo_name == "GitHub" and repo_url %}
- {% set repo_id = repo_url | replace("https://github.com/", "") %}
- {% if repo_id[-1:] == "/" %}
- {% set repo_id = repo_id[:-1] %}
- {% endif %}
- {% endif %}
- <div class="backdrop">
- <div class="backdrop-paper"></div>
- </div>
- <input class="toggle" type="checkbox" id="toggle-drawer">
- <input class="toggle" type="checkbox" id="toggle-search">
- <label class="toggle-button overlay" for="toggle-drawer"></label>
- <header class="header">
- {% include "header.html" %}
- </header>
- <main class="main">
- {% set h1 = "\x3ch1 id=" in content %}
- <div class="drawer">
- {% include "drawer.html" %}
- </div>
- <article class="article">
- <div class="wrapper">
- {% if not h1 %}
- <h1>{{ page_title | default(site_name, true)}}</h1>
- {% endif %}
- {{ content }}
- <aside class="copyright" role="note">
- {% if copyright %}
- {{ copyright }} –
+ {% set primary = palette.primary | replace(" ", "-") | lower %}
+ {% set accent = palette.accent | replace(" ", "-") | lower %}
+ {% if primary or accent %}
+ <body data-md-color-primary="{{ primary }}" data-md-color-accent="{{ accent }}">
+ {% else %}
+ <body>
+ {% endif %}
+ <svg class="md-svg">
+ <defs>
+ {% set platform = config.extra.repo_icon or config.repo_url %}
+ {% if "github" in platform %}
+ {% include "assets/images/icons/github-1da075986e.svg" %}
+ {% elif "gitlab" in platform %}
+ {% include "assets/images/icons/gitlab-5ad3f9f9e5.svg" %}
+ {% elif "bitbucket" in platform %}
+ {% include "assets/images/icons/bitbucket-670608a71a.svg" %}
+ {% endif %}
+ </defs>
+ </svg>
+ <input class="md-toggle" data-md-toggle="drawer" type="checkbox" id="drawer">
+ <input class="md-toggle" data-md-toggle="search" type="checkbox" id="search">
+ <label class="md-overlay" data-md-component="overlay" for="drawer"></label>
+ {% block header %}
+ {% include "partials/header.html" %}
+ {% endblock %}
+ <div class="md-container">
+ <main class="md-main">
+ <div class="md-main__inner md-grid" data-md-component="container">
+ {% block site_nav %}
+ {% if nav %}
+ <div class="md-sidebar md-sidebar--primary" data-md-component="navigation">
+ <div class="md-sidebar__scrollwrap">
+ <div class="md-sidebar__inner">
+ {% include "partials/nav.html" %}
+ </div>
+ </div>
+ </div>
+ {% endif %}
+ {% if page.toc %}
+ <div class="md-sidebar md-sidebar--secondary" data-md-component="toc">
+ <div class="md-sidebar__scrollwrap">
+ <div class="md-sidebar__inner">
+ {% include "partials/toc.html" %}
+ </div>
+ </div>
+ </div>
{% endif %}
- Documentation built with
- <a href="http://www.mkdocs.org" target="_blank">MkDocs</a>
- using the
- <a href="http://squidfunk.github.io/mkdocs-material/" target="_blank">
- Material
- </a>
- theme.
- </aside>
- {% block footer %}
- <footer class="footer">
- {% include "footer.html" %}
- </footer>
{% endblock %}
- </div>
- </article>
- <div class="results" role="status" aria-live="polite">
- <div class="scrollable">
- <div class="wrapper">
- <div class="meta"></div>
- <div class="list"></div>
+ <div class="md-content">
+ <article class="md-content__inner md-typeset">
+ {% if config.edit_uri %}
+ <a href="{{ page.edit_url }}" title="{{ lang.t('edit.link.title') }}" class="md-icon md-content__edit">edit</a>
+ {% endif %}
+ {% block content %}
+ {% if not "\x3ch1 id=" in page.content %}
+ <h1>{{ page.title | default(config.site_name, true)}}</h1>
+ {% endif %}
+ {{ page.content }}
+ {% endblock %}
+ </article>
</div>
</div>
- </div>
- </main>
- <script>
- var base_url = '{{ base_url }}';
- var repo_id = '{{ repo_id }}';
- </script>
- <script src="{{ base_url }}/assets/javascripts/application-997097ee0c.js"></script>
- {% for path in extra_javascript %}
- <script src="{{ path }}"></script>
- {% endfor %}
- {% if google_analytics %}
- <script>
- (function(i,s,o,g,r,a,m){
- i['GoogleAnalyticsObject']=r;i[r]=i[r]||function(){(i[r].q=i[r].q||
- []).push(arguments)},i[r].l=1*new Date();a=s.createElement(o),
- m=s.getElementsByTagName(o)[0];a.async=1;a.src=g;
- m.parentNode.insertBefore(a,m)
- })(window, document,
- 'script', 'https://www.google-analytics.com/analytics.js', 'ga');
- /* General initialization */
- ga('create', '{{ google_analytics[0] }}', '{{ google_analytics[1] }}');
- ga('set', 'anonymizeIp', true);
- ga('send', 'pageview');
- /* Track outbound links */
- var buttons = document.querySelectorAll('a');
- Array.prototype.map.call(buttons, function(item) {
- if (item.host != document.location.host) {
- item.addEventListener('click', function() {
- var action = item.getAttribute('data-action') || 'follow';
- ga('send', 'event', 'outbound', action, item.href);
- });
- }
- });
- /* Register handler to log search on blur */
- var query = document.querySelector('.query');
- query.addEventListener('blur', function() {
- if (this.value) {
- var path = document.location.pathname;
- ga('send', 'pageview', path + '?q=' + this.value);
- }
- });
- </script>
- {% endif %}
+ </main>
+ {% block footer %}
+ {% include "partials/footer.html" %}
+ {% endblock %}
+ </div>
+ {% block scripts %}
+ <script src="{{ base_url }}/assets/javascripts/application-16f434a21a.js"></script>
+ <script>var config={url:{base:"{{ base_url }}"}},app=new Application(config);app.initialize()</script>
+ {% for path in extra_javascript %}
+ <script src="{{ path }}"></script>
+ {% endfor %}
+ {% endblock %}
+ {% block analytics %}
+ {% if config.google_analytics %}
+ <script>!function(e,t,a,n,o,c,i){e.GoogleAnalyticsObject=o,e[o]=e[o]||function(){(e[o].q=e[o].q||[]).push(arguments)},e[o].l=1*new Date,c=t.createElement(a),i=t.getElementsByTagName(a)[0],c.async=1,c.src=n,i.parentNode.insertBefore(c,i)}(window,document,"script","https://www.google-analytics.com/analytics.js","ga"),ga("create","{{ config.google_analytics[0] }}","{{ config.google_analytics[1] }}"),ga("set","anonymizeIp",!0),ga("send","pageview");var links=document.getElementsByTagName("a");Array.prototype.map.call(links,function(e){e.host!=document.location.host&&e.addEventListener("click",function(){var t=e.getAttribute("data-md-action")||"follow";ga("send","event","outbound",t,e.href)})});var query=document.forms.search.query;query.addEventListener("blur",function(){if(this.value){var e=document.location.pathname;ga("send","pageview",e+"?q="+this.value)}})</script>
+ {% endif %}
+ {% endblock %}
</body>
-</html>
\ No newline at end of file
+</html>
diff --git a/material/drawer.html b/material/drawer.html
deleted file mode 100644
index 30edd3a0b93673c81332058f99f2ea12d0d60bcc..0000000000000000000000000000000000000000
--- a/material/drawer.html
+++ /dev/null
@@ -1,76 +0,0 @@
-<nav aria-label="Navigation">
- {% set home = repo_url | default("/", true) %}
- {% if repo_name == "GitHub" and repo_url %}
- <a href="{{ home }}" class="project">
- <div class="banner">
- {% if config.extra.logo %}
- <div class="logo">
- <img src="{{ base_url }}/{{ config.extra.logo }}">
- </div>
- {% endif %}
- <div class="name">
- <strong>
- {{ site_name }}
- <span class="version">
- {{ config.extra.version }}
- </span>
- </strong>
- {% if repo_id %}
- <br>
- {{ repo_id }}
- {% endif %}
- </div>
- </div>
- </a>
- {% endif %}
- <div class="scrollable">
- <div class="wrapper">
- {% if repo_name == "GitHub" and repo_url %}
- <ul class="repo">
- <li class="repo-download">
- {% set version = config.extra.version | default("master") %}
- <a href="{{ repo_url }}/archive/{{ version }}.zip" target="_blank" title="Download" data-action="download">
- <i class="icon icon-download"></i> Download
- </a>
- </li>
- <li class="repo-stars">
- <a href="{{ repo_url }}/stargazers" target="_blank" title="Stargazers" data-action="star">
- <i class="icon icon-star"></i> Stars
- <span class="count">–</span>
- </a>
- </li>
- </ul>
- <hr>
- {% endif %}
- <div class="toc">
- <ul>
- {% for nav_item in nav %}
- {% include "nav.html" %}
- {% endfor %}
- </ul>
- {% if config.extra.author %}
- <hr>
- <span class="section">The author</span>
- <ul>
- {% if config.extra.author.twitter %}
- {% set author = config.extra.author.twitter %}
- <li>
- <a href="https://twitter.com/{{ author }}" target="_blank" title="@{{ author }} on Twitter">
- @{{ author }} on Twitter
- </a>
- </li>
- {% endif %}
- {% if config.extra.author.github %}
- {% set author = config.extra.author.github %}
- <li>
- <a href="https://github.com/{{ author }}" target="_blank" title="@{{ author }} on GitHub">
- @{{ author }} on GitHub
- </a>
- </li>
- {% endif %}
- </ul>
- {% endif %}
- </div>
- </div>
- </div>
-</nav>
diff --git a/material/footer.html b/material/footer.html
deleted file mode 100644
index 660b28f675bed601c659042ae28edc4e8001cbf5..0000000000000000000000000000000000000000
--- a/material/footer.html
+++ /dev/null
@@ -1,42 +0,0 @@
-{% if include_next_prev %}
- <nav class="pagination" aria-label="Footer">
- <div class="previous">
- {% if previous_page %}
- <a href="{{ previous_page.url }}" title="{{ previous_page.title }}">
- <span class="direction">
- {{ config.extra.get("i18n", {}).prev | default("Previous") }}
- </span>
- <div class="page">
- <div class="button button-previous" role="button" aria-label="Previous">
- <i class="icon icon-back"></i>
- </div>
- <div class="stretch">
- <div class="title">
- {{ previous_page.title }}
- </div>
- </div>
- </div>
- </a>
- {% endif %}
- </div>
- <div class="next">
- {% if next_page %}
- <a href="{{ next_page.url }}" title="{{ next_page.title }}">
- <span class="direction">
- {{ config.extra.get("i18n", {}).next | default("Next") }}
- </span>
- <div class="page">
- <div class="stretch">
- <div class="title">
- {{ next_page.title }}
- </div>
- </div>
- <div class="button button-next" role="button" aria-label="Next">
- <i class="icon icon-forward"></i>
- </div>
- </div>
- </a>
- {% endif %}
- </div>
- </nav>
-{% endif %}
\ No newline at end of file
diff --git a/material/header.html b/material/header.html
deleted file mode 100644
index f910b5b8d1bc937098b0201a91385178d60d793e..0000000000000000000000000000000000000000
--- a/material/header.html
+++ /dev/null
@@ -1,54 +0,0 @@
-<nav aria-label="Header">
- <div class="bar default">
- <div class="button button-menu" role="button" aria-label="Menu">
- <label class="toggle-button icon icon-menu" for="toggle-drawer">
- <span></span>
- </label>
- </div>
- <div class="stretch">
- <div class="title">
- {% if current_page %}
- <span class="path">
- {% for doc in current_page.ancestors %}
- {% if doc.link %}
- <a href="{{ doc.link | e }}">{{ doc.title }}</a>
- <i class="icon icon-link"></i>
- {% else %}
- {{ doc.title }} <i class="icon icon-link"></i>
- {% endif %}
- {% endfor %}
- </span>
- {% endif %}
- {{ page_title | default(site_name, true) }}
- </div>
- </div>
- {% if config.extra.get("author", {}).twitter %}
- {% set author = config.extra.author.twitter %}
- <div class="button button-twitter" role="button" aria-label="Twitter">
- <a href="https://twitter.com/{{ author }}" title="@{{ author }} on Twitter" target="_blank" class="toggle-button icon icon-twitter"></a>
- </div>
- {% endif %}
- {% if config.extra.get("author", {}).github %}
- {% set author = config.extra.author.github %}
- <div class="button button-github" role="button" aria-label="GitHub">
- <a href="https://github.com/{{ author }}" title="@{{ author }} on GitHub" target="_blank" class="toggle-button icon icon-github"></a>
- </div>
- {% endif %}
- <div class="button button-search" role="button" aria-label="Search">
- <label class="toggle-button icon icon-search" title="Search" for="toggle-search"></label>
- </div>
- </div>
- <div class="bar search">
- <div class="button button-close" role="button" aria-label="Close">
- <label class="toggle-button icon icon-back" for="toggle-search"></label>
- </div>
- <div class="stretch">
- <div class="field">
- <input class="query" type="text" placeholder="Search" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck>
- </div>
- </div>
- <div class="button button-reset" role="button" aria-label="Search">
- <button class="toggle-button icon icon-close" id="reset-search"></button>
- </div>
- </div>
-</nav>
\ No newline at end of file
diff --git a/material/main.html b/material/main.html
new file mode 100644
index 0000000000000000000000000000000000000000..94d9808cc760156cb7ab46e326c0267f3406125e
--- /dev/null
+++ b/material/main.html
@@ -0,0 +1 @@
+{% extends "base.html" %}
diff --git a/material/nav.html b/material/nav.html
deleted file mode 100644
index 1faf8c2fef11e7e013bde0ce8ab0ba09b0fab0fa..0000000000000000000000000000000000000000
--- a/material/nav.html
+++ /dev/null
@@ -1,34 +0,0 @@
-{% if not nav_item.title.startswith(" ") %}
-{% if nav_item.children %}
- <li>
- <span class="section">{{ nav_item.title }}</span>
- <ul>
- {% for nav_item in nav_item.children %}
- {% include "nav.html" %}
- {% endfor %}
- </ul>
- </li>
-{% else %}
- <li>
- <a class="{% if nav_item.active %}current{% endif %}" title="{{ nav_item.title }}" href="{{ nav_item.url }}">
- {{ nav_item.title }}
- </a>
- {% if nav_item == current_page %}
- {% if h1 %}
- {% set toc = (toc | first).children %}
- {% endif %}
- {% if toc and (toc | first) %}
- <ul>
- {% for toc_item in toc %}
- <li class="anchor">
- <a title="{{ toc_item.title }}" href="{{ toc_item.url }}">
- {{ toc_item.title }}
- </a>
- </li>
- {% endfor %}
- </ul>
- {% endif %}
- {% endif %}
- </li>
-{% endif %}
-{% endif %}
diff --git a/material/partials/footer.html b/material/partials/footer.html
new file mode 100644
index 0000000000000000000000000000000000000000..afadcdd62bd1a7de1217692336dd49b85d2c3d4f
--- /dev/null
+++ b/material/partials/footer.html
@@ -0,0 +1,58 @@
+{% import "partials/language.html" as lang %}
+<footer class="md-footer">
+ {% if page.previous_page or page.next_page %}
+ <div class="md-footer-nav">
+ <nav class="md-footer-nav__inner md-grid">
+ {% if page.previous_page %}
+ <a href="{{ page.previous_page.url }}" title="{{ page.previous_page.title }}" class="md-flex md-footer-nav__link md-footer-nav__link--prev" rel="prev">
+ <div class="md-flex__cell md-flex__cell--shrink">
+ <i class="md-icon md-icon--arrow-back md-footer-nav__button"></i>
+ </div>
+ <div class="md-flex__cell md-flex__cell--stretch md-footer-nav__title">
+ <span class="md-flex__ellipsis">
+ <span class="md-footer-nav__direction">
+ {{ lang.t('footer.previous') }}
+ </span>
+ {{ page.previous_page.title }}
+ </span>
+ </div>
+ </a>
+ {% endif %}
+ {% if page.next_page %}
+ <a href="{{ page.next_page.url }}" title="{{ page.next_page.title }}" class="md-flex md-footer-nav__link md-footer-nav__link--next" rel="next">
+ <div class="md-flex__cell md-flex__cell--stretch md-footer-nav__title">
+ <span class="md-flex__ellipsis">
+ <span class="md-footer-nav__direction">
+ {{ lang.t('footer.next') }}
+ </span>
+ {{ page.next_page.title }}
+ </span>
+ </div>
+ <div class="md-flex__cell md-flex__cell--shrink">
+ <i class="md-icon md-icon--arrow-forward md-footer-nav__button"></i>
+ </div>
+ </a>
+ {% endif %}
+ </nav>
+ </div>
+ {% endif %}
+ <div class="md-footer-meta md-typeset">
+ <div class="md-footer-meta__inner md-grid">
+ <div class="md-footer-copyright">
+ {% if config.copyright %}
+ <div class="md-footer-copyright__highlight">
+ {{ config.copyright }}
+ </div>
+ {% endif %}
+ powered by
+ <a href="http://www.mkdocs.org" title="MkDocs">MkDocs</a>
+ and
+ <a href="http://squidfunk.github.io/mkdocs-material/" title="Material for MkDocs">
+ Material for MkDocs</a>
+ </div>
+ {% block social %}
+ {% include "partials/social.html" %}
+ {% endblock %}
+ </div>
+ </div>
+</footer>
diff --git a/material/partials/header.html b/material/partials/header.html
new file mode 100644
index 0000000000000000000000000000000000000000..ead153730fbc37c8d8be652621dc87f456ea730a
--- /dev/null
+++ b/material/partials/header.html
@@ -0,0 +1,43 @@
+<header class="md-header">
+ <nav class="md-header-nav md-grid">
+ <div class="md-flex">
+ <div class="md-flex__cell md-flex__cell--shrink">
+ <a href="{{ nav.homepage.url }}" title="{{ config.site_name }}" class="{% if config.extra.logo %} md-logo {% else %} md-icon md-icon--home {% endif %} md-header-nav__button">
+ {% if config.extra.logo %}
+ <img src="{{ base_url }}/{{ config.extra.logo }}" width="24" height="24">
+ {% endif %}
+ </a>
+ </div>
+ <div class="md-flex__cell md-flex__cell--shrink">
+ <label class="md-icon md-icon--menu md-header-nav__button" for="drawer"></label>
+ </div>
+ <div class="md-flex__cell md-flex__cell--stretch">
+ <span class="md-flex__ellipsis md-header-nav__title">
+ {% block site_name %}
+ {% if page %}
+ {% for parent in page.ancestors %}
+ <span class="md-header-nav__parent">
+ {{ parent.title }}
+ </span>
+ {% endfor %}
+ {% endif %}
+ {{ page.title | default(config.site_name, true) }}
+ {% endblock %}
+ </span>
+ </div>
+ <div class="md-flex__cell md-flex__cell--shrink">
+ {% block search_box %}
+ <label class="md-icon md-icon--search md-header-nav__button" for="search"></label>
+ {% include "partials/search.html" %}
+ {% endblock %}
+ </div>
+ <div class="md-flex__cell md-flex__cell--shrink">
+ <div class="md-header-nav__source">
+ {% if config.repo_url %}
+ {% include "partials/source.html" %}
+ {% endif %}
+ </div>
+ </div>
+ </div>
+ </nav>
+</header>
diff --git a/material/partials/language.html b/material/partials/language.html
new file mode 100644
index 0000000000000000000000000000000000000000..bf43cf5884bf71fcaafaf62532efe913e7fc7f81
--- /dev/null
+++ b/material/partials/language.html
@@ -0,0 +1,8 @@
+{% macro t(key) %}{{ {
+ "edit.link.title": "Edit this page",
+ "footer.previous": "Previous",
+ "footer.next": "Next",
+ "search.placeholder": "Search",
+ "source.link.title": "Go to repository",
+ "toc.title": "Table of contents"
+}[key] }}{% endmacro %}
diff --git a/material/partials/nav-item.html b/material/partials/nav-item.html
new file mode 100644
index 0000000000000000000000000000000000000000..651c6012013d18f04c950a92f7716b673bd36b76
--- /dev/null
+++ b/material/partials/nav-item.html
@@ -0,0 +1,55 @@
+{% if nav_item.children %}
+ <li class="md-nav__item md-nav__item--nested">
+ {% if nav_item.active %}
+ <input class="md-toggle md-nav__toggle" data-md-toggle="{{ path }}" type="checkbox" id="{{ path }}" checked>
+ {% else %}
+ <input class="md-toggle md-nav__toggle" data-md-toggle="{{ path }}" type="checkbox" id="{{ path }}">
+ {% endif %}
+ <label class="md-nav__link" for="{{ path }}">
+ {{ nav_item.title }}
+ </label>
+ <nav class="md-nav" data-md-component="collapsible">
+ <label class="md-nav__title" for="{{ path }}">
+ {{ nav_item.title}}
+ </label>
+ <ul class="md-nav__list" data-md-scrollfix>
+ {% set base = path %}
+ {% for nav_item in nav_item.children %}
+ {% set path = base + "-" + loop.index | string %}
+ {% include "partials/nav-item.html" %}
+ {% endfor %}
+ </ul>
+ </nav>
+ </li>
+{% elif nav_item == page %}
+ <li class="md-nav__item">
+ {% set toc_ = page.toc %}
+ <input class="md-toggle md-nav__toggle" data-md-toggle="toc" type="checkbox" id="toc">
+ {% if "\x3ch1 id=" in page.content %}
+ {% set toc_ = (toc_ | first).children %}
+ {% endif %}
+ {% if toc_ and (toc_ | first) %}
+ <label class="md-nav__link md-nav__link--active" for="toc">
+ {{ nav_item.title }}
+ </label>
+ {% endif %}
+ <a href="{{ nav_item.url }}" title="{{ nav_item.title }}" class="md-nav__link md-nav__link--active">
+ {{ nav_item.title }}
+ </a>
+ {% if page.toc %}
+ {% include "partials/toc.html" %}
+ {% endif %}
+ </li>
+{% else %}
+ <li class="md-nav__item">
+ {% if nav_item.active %}
+ <a href="{{ nav_item.url }}" title="{{ nav_item.title }}" class="md-nav__link md-nav__link--active">
+ {{ nav_item.title }}
+ </a>
+ {% else %}
+ <a href="{{ nav_item.url }}" title="{{ nav_item.title }}" class="md-nav__link">
+ {{ nav_item.title }}
+ </a>
+ {% endif %}
+ </li>
+{% endif %}
diff --git a/material/partials/nav.html b/material/partials/nav.html
new file mode 100644
index 0000000000000000000000000000000000000000..2d2eb8e786b8fa45f5d09a9e4e353659bb7f1ecf
--- /dev/null
+++ b/material/partials/nav.html
@@ -0,0 +1,21 @@
+<nav class="md-nav md-nav--primary">
+ <label class="md-nav__title md-nav__title--site" for="drawer">
+ <i class="{% if config.extra.logo %} md-logo {% else %} md-icon md-icon--home {% endif %} md-nav__button">
+ {% if config.extra.logo %}
+ <img src="{{ base_url }}/{{ config.extra.logo }}">
+ {% endif %}
+ </i>
+ {{ config.site_name }}
+ </label>
+ {% if config.repo_url %}
+ <div class="md-nav__source">
+ {% include "partials/source.html" %}
+ </div>
+ {% endif %}
+ <ul class="md-nav__list" data-md-scrollfix>
+ {% for nav_item in nav %}
+ {% set path = "nav-" + loop.index | string %}
+ {% include "partials/nav-item.html" %}
+ {% endfor %}
+ </ul>
+</nav>
diff --git a/material/partials/search.html b/material/partials/search.html
new file mode 100644
index 0000000000000000000000000000000000000000..87783dbf081ec57d523990c8c95c5e8fc9a4915e
--- /dev/null
+++ b/material/partials/search.html
@@ -0,0 +1,15 @@
+{% import "partials/language.html" as lang %}
+<div class="md-search" data-md-component="search">
+ <div class="md-search__overlay"></div>
+ <div class="md-search__inner">
+ <form class="md-search__form" name="search">
+ <input type="text" class="md-search__input" name="query" placeholder="{{ lang.t('search.placeholder') }}" accesskey="s" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck="false">
+ <label class="md-icon md-search__icon" for="search"></label>
+ </form>
+ <div class="md-search__output">
+ <div class="md-search__scrollwrap" data-md-scrollfix>
+ <div class="md-search-result" data-md-component="result"></div>
+ </div>
+ </div>
+ </div>
+</div>
diff --git a/material/partials/social.html b/material/partials/social.html
new file mode 100644
index 0000000000000000000000000000000000000000..cb68735adf221f7665afcecb8f1efab292030876
--- /dev/null
+++ b/material/partials/social.html
@@ -0,0 +1,9 @@
+{% if config.extra.social %}
+ <div class="md-footer-social">
+ {% set path = "ajax/libs/font-awesome/4.7.0/css/font-awesome.min.css" %}
+ <link rel="stylesheet" href="https://cdnjs.cloudflare.com/{{ path }}">
+ {% for social in config.extra.social %}
+ <a href="{{ social.link }}" class="md-footer-social__link fa fa-{{ social.type }}"></a>
+ {% endfor %}
+ </div>
+{% endif %}
diff --git a/material/partials/source.html b/material/partials/source.html
new file mode 100644
index 0000000000000000000000000000000000000000..221b551ab3d8a87c7fa14a3c8f63760be395f902
--- /dev/null
+++ b/material/partials/source.html
@@ -0,0 +1,25 @@
+{% import "partials/language.html" as lang %}
+{% set platform = config.extra.repo_icon or config.repo_url %}
+{% if "github" in platform %}
+ {% set repo_type = "github" %}
+{% elif "gitlab" in platform %}
+ {% set repo_type = "gitlab" %}
+{% elif "bitbucket" in platform %}
+ {% set repo_type = "bitbucket" %}
+{% else %}
+ {% set repo_type = "" %}
+{% endif %}
+{% block repo %}
+ <a href="{{ config.repo_url }}" title="{{ lang.t('source.link.title') }}" class="md-source" data-md-source="{{ repo_type }}">
+ {% if repo_type %}
+ <div class="md-source__icon">
+ <svg viewBox="0 0 24 24" width="24" height="24">
+ <use xlink:href="#{{ repo_type }}" width="24" height="24"></use>
+ </svg>
+ </div>
+ {% endif %}
+ <div class="md-source__repository">
+ {{ config.repo_name }}
+ </div>
+ </a>
+{% endblock %}
diff --git a/material/partials/toc-item.html b/material/partials/toc-item.html
new file mode 100644
index 0000000000000000000000000000000000000000..3b4f4d76ceed626801891dbf0cf024df7882c1ee
--- /dev/null
+++ b/material/partials/toc-item.html
@@ -0,0 +1,14 @@
+<li class="md-nav__item">
+ <a href="{{ toc_item.url }}" title="{{ toc_item.title }}" class="md-nav__link">
+ {{ toc_item.title }}
+ </a>
+ {% if toc_item.children %}
+ <nav class="md-nav">
+ <ul class="md-nav__list">
+ {% for toc_item in toc_item.children %}
+ {% include "partials/toc-item.html" %}
+ {% endfor %}
+ </ul>
+ </nav>
+ {% endif %}
+</li>
diff --git a/material/partials/toc.html b/material/partials/toc.html
new file mode 100644
index 0000000000000000000000000000000000000000..004067dda9103cf62ed2b27b9b50dc38f84b5b2f
--- /dev/null
+++ b/material/partials/toc.html
@@ -0,0 +1,15 @@
+{% import "partials/language.html" as lang %}
+<nav class="md-nav md-nav--secondary">
+ {% set toc_ = page.toc %}
+ {% if "\x3ch1 id=" in page.content %}
+ {% set toc_ = (toc_ | first).children %}
+ {% endif %}
+ {% if toc_ and (toc_ | first) %}
+ <label class="md-nav__title" for="toc">{{ lang.t('toc.title') }}</label>
+ <ul class="md-nav__list" data-md-scrollfix>
+ {% for toc_item in toc_ %}
+ {% include "partials/toc-item.html" %}
+ {% endfor %}
+ </ul>
+ {% endif %}
+</nav>
diff --git a/mkdocs.yml b/mkdocs.yml
index 89336bdef54bb2c8cabc7ef585f92eed5fd54829..519ad11829759615dd6862528931b196204e4672 100644
--- a/mkdocs.yml
+++ b/mkdocs.yml
@@ -37,8 +37,8 @@ pages:
- Job Submission and Execution: anselm-cluster-documentation/job-submission-and-execution.md
- Capacity computing: anselm-cluster-documentation/capacity-computing.md
- Storage: anselm-cluster-documentation/storage.md
- - Anselm Cluster Software: anselm-cluster-documentation/software/index.md
- - ' Anselm Cluster Software':
+# - Anselm Cluster Software: anselm-cluster-documentation/software/index.md
+ - 'Anselm Cluster Software':
- Modules: modules-anselm.md
- COMSOL: anselm-cluster-documentation/software/comsol-multiphysics.md
- ParaView: anselm-cluster-documentation/software/paraview.md
@@ -51,59 +51,59 @@ pages:
- Virtualization: anselm-cluster-documentation/software/kvirtualization.md
- Java: anselm-cluster-documentation/software/java.md
- Operating System: anselm-cluster-documentation/software/operating-system.md
- - ' Anselm Cluster Intel Suite':
- - Introduction: anselm-cluster-documentation/software/intel-suite/introduction.md
- - Intel MKL: anselm-cluster-documentation/software/intel-suite/intel-mkl.md
- - Intel Compilers: anselm-cluster-documentation/software/intel-suite/intel-compilers.md
- - Intel IPP: anselm-cluster-documentation/software/intel-suite/intel-integrated-performance-primitives.md
- - Intel TBB: anselm-cluster-documentation/software/intel-suite/intel-tbb.md
- - Intel Debugger: anselm-cluster-documentation/software/intel-suite/intel-debugger.md
- - ' Anselm Cluster MPI':
- - Introduction: anselm-cluster-documentation/software/mpi/mpi.md
- - MPI4Py (MPI for Python): anselm-cluster-documentation/software/mpi/mpi4py-mpi-for-python.md
- - Running OpenMPI: anselm-cluster-documentation/software/mpi/Running_OpenMPI.md
- - Running MPICH2: anselm-cluster-documentation/software/mpi/running-mpich2.md
- - ' Anselm Cluster Numerical Libraries':
- - Intel numerical libraries: anselm-cluster-documentation/software/numerical-libraries/intel-numerical-libraries.md
- - PETSc: anselm-cluster-documentation/software/numerical-libraries/petsc.md
- - Trilinos: anselm-cluster-documentation/software/numerical-libraries/trilinos.md
- - FFTW: anselm-cluster-documentation/software/numerical-libraries/fftw.md
- - GSL: anselm-cluster-documentation/software/numerical-libraries/gsl.md
- - MAGMA for Intel Xeon Phi: anselm-cluster-documentation/software/numerical-libraries/magma-for-intel-xeon-phi.md
- - HDF5: anselm-cluster-documentation/software/numerical-libraries/hdf5.md
- - ' Anselm Cluster Omics Master':
- - Diagnostic component (TEAM): anselm-cluster-documentation/software/omics-master/diagnostic-component-team.md
- - Priorization component (BiERApp): anselm-cluster-documentation/software/omics-master/priorization-component-bierapp.md
- - Overview: anselm-cluster-documentation/software/omics-master/overview.md
- - ' Anselm Cluster Debuggers':
- - Valgrind: anselm-cluster-documentation/software/debuggers/valgrind.md
- - PAPI: anselm-cluster-documentation/software/debuggers/papi.md
- - Allinea Forge (DDT,MAP): anselm-cluster-documentation/software/debuggers/allinea-ddt.md
- - Total View: anselm-cluster-documentation/software/debuggers/total-view.md
- - CUBE: anselm-cluster-documentation/software/debuggers/cube.md
- - Intel VTune Amplifier: anselm-cluster-documentation/software/debuggers/intel-vtune-amplifier.md
- - VNC: anselm-cluster-documentation/software/debuggers/debuggers.md
- - Scalasca: anselm-cluster-documentation/software/debuggers/scalasca.md
- - Score-P: anselm-cluster-documentation/software/debuggers/score-p.md
- - Intel Performance Counter Monitor: anselm-cluster-documentation/software/debuggers/intel-performance-counter-monitor.md
- - Allinea Performance Reports: anselm-cluster-documentation/software/debuggers/allinea-performance-reports.md
- - Vampir: anselm-cluster-documentation/software/debuggers/vampir.md
- - ' Anselm Cluster Numerical Languages':
- - Introduction: anselm-cluster-documentation/software/numerical-languages/introduction.md
- - R: anselm-cluster-documentation/software/numerical-languages/r.md
- - Matlab 2013-2014: anselm-cluster-documentation/software/numerical-languages/matlab_1314.md
- - Matlab: anselm-cluster-documentation/software/numerical-languages/matlab.md
- - Octave: anselm-cluster-documentation/software/numerical-languages/octave.md
- - ' Anselm Cluster Chemistry':
- - Molpro: anselm-cluster-documentation/software/chemistry/molpro.md
- - NWChem: anselm-cluster-documentation/software/chemistry/nwchem.md
- - ' Anselm Cluster Ansys':
- - Introduction: anselm-cluster-documentation/software/ansys/ansys.md
- - ANSYS CFX: anselm-cluster-documentation/software/ansys/ansys-cfx.md
- - ANSYS LS-DYNA: anselm-cluster-documentation/software/ansys/ansys-ls-dyna.md
- - ANSYS MAPDL: anselm-cluster-documentation/software/ansys/ansys-mechanical-apdl.md
- - LS-DYNA: anselm-cluster-documentation/software/ansys/ls-dyna.md
- - ANSYS Fluent: anselm-cluster-documentation/software/ansys/ansys-fluent.md
+ - 'Intel Suite':
+ - Introduction: anselm-cluster-documentation/software/intel-suite/introduction.md
+ - Intel MKL: anselm-cluster-documentation/software/intel-suite/intel-mkl.md
+ - Intel Compilers: anselm-cluster-documentation/software/intel-suite/intel-compilers.md
+ - Intel IPP: anselm-cluster-documentation/software/intel-suite/intel-integrated-performance-primitives.md
+ - Intel TBB: anselm-cluster-documentation/software/intel-suite/intel-tbb.md
+ - Intel Debugger: anselm-cluster-documentation/software/intel-suite/intel-debugger.md
+ - 'MPI':
+ - Introduction: anselm-cluster-documentation/software/mpi/mpi.md
+ - MPI4Py (MPI for Python): anselm-cluster-documentation/software/mpi/mpi4py-mpi-for-python.md
+ - Running OpenMPI: anselm-cluster-documentation/software/mpi/Running_OpenMPI.md
+ - Running MPICH2: anselm-cluster-documentation/software/mpi/running-mpich2.md
+ - 'Numerical Libraries':
+ - Intel numerical libraries: anselm-cluster-documentation/software/numerical-libraries/intel-numerical-libraries.md
+ - PETSc: anselm-cluster-documentation/software/numerical-libraries/petsc.md
+ - Trilinos: anselm-cluster-documentation/software/numerical-libraries/trilinos.md
+ - FFTW: anselm-cluster-documentation/software/numerical-libraries/fftw.md
+ - GSL: anselm-cluster-documentation/software/numerical-libraries/gsl.md
+ - MAGMA for Intel Xeon Phi: anselm-cluster-documentation/software/numerical-libraries/magma-for-intel-xeon-phi.md
+ - HDF5: anselm-cluster-documentation/software/numerical-libraries/hdf5.md
+ - 'Omics Master':
+ - Diagnostic component (TEAM): anselm-cluster-documentation/software/omics-master/diagnostic-component-team.md
+ - Priorization component (BiERApp): anselm-cluster-documentation/software/omics-master/priorization-component-bierapp.md
+ - Overview: anselm-cluster-documentation/software/omics-master/overview.md
+ - 'Debuggers':
+ - Valgrind: anselm-cluster-documentation/software/debuggers/valgrind.md
+ - PAPI: anselm-cluster-documentation/software/debuggers/papi.md
+ - Allinea Forge (DDT,MAP): anselm-cluster-documentation/software/debuggers/allinea-ddt.md
+ - Total View: anselm-cluster-documentation/software/debuggers/total-view.md
+ - CUBE: anselm-cluster-documentation/software/debuggers/cube.md
+ - Intel VTune Amplifier: anselm-cluster-documentation/software/debuggers/intel-vtune-amplifier.md
+ - VNC: anselm-cluster-documentation/software/debuggers/debuggers.md
+ - Scalasca: anselm-cluster-documentation/software/debuggers/scalasca.md
+ - Score-P: anselm-cluster-documentation/software/debuggers/score-p.md
+ - Intel Performance Counter Monitor: anselm-cluster-documentation/software/debuggers/intel-performance-counter-monitor.md
+ - Allinea Performance Reports: anselm-cluster-documentation/software/debuggers/allinea-performance-reports.md
+ - Vampir: anselm-cluster-documentation/software/debuggers/vampir.md
+ - 'Numerical Languages':
+ - Introduction: anselm-cluster-documentation/software/numerical-languages/introduction.md
+ - R: anselm-cluster-documentation/software/numerical-languages/r.md
+ - Matlab 2013-2014: anselm-cluster-documentation/software/numerical-languages/matlab_1314.md
+ - Matlab: anselm-cluster-documentation/software/numerical-languages/matlab.md
+ - Octave: anselm-cluster-documentation/software/numerical-languages/octave.md
+ - 'Chemistry':
+ - Molpro: anselm-cluster-documentation/software/chemistry/molpro.md
+ - NWChem: anselm-cluster-documentation/software/chemistry/nwchem.md
+ - 'Ansys':
+ - Introduction: anselm-cluster-documentation/software/ansys/ansys.md
+ - ANSYS CFX: anselm-cluster-documentation/software/ansys/ansys-cfx.md
+ - ANSYS LS-DYNA: anselm-cluster-documentation/software/ansys/ansys-ls-dyna.md
+ - ANSYS MAPDL: anselm-cluster-documentation/software/ansys/ansys-mechanical-apdl.md
+ - LS-DYNA: anselm-cluster-documentation/software/ansys/ls-dyna.md
+ - ANSYS Fluent: anselm-cluster-documentation/software/ansys/ansys-fluent.md
- Salomon Cluster Documentation:
- Introduction: salomon/introduction.md
- PRACE User Support: salomon/prace.md
@@ -121,74 +121,75 @@ pages:
- Job submission and execution: salomon/job-submission-and-execution.md
- Capacity computing: salomon/capacity-computing.md
- Storage: salomon/storage.md
- - Salomon Cluster Software: salomon/software/index.md
- - ' Salomon Cluster Software':
+ - 'Salomon Cluster Software':
- Modules: modules-salomon.md
- UV Modules: modules-salomon-uv.md
- Compilers: salomon/software/compilers.md
- Intel Xeon Phi: salomon/software/intel-xeon-phi.md
- Java: salomon/software/java.md
- Operating System: salomon/software/operating-system.md
- - ' Salomon Cluster Intel Suite':
- - Introduction: salomon/software/intel-suite/intel-parallel-studio-introduction.md
- - Intel MKL: salomon/software/intel-suite/intel-mkl.md
- - Intel Compilers: salomon/software/intel-suite/intel-compilers.md
- - Intel IPP: salomon/software/intel-suite/intel-integrated-performance-primitives.md
- - Intel TBB: salomon/software/intel-suite/intel-tbb.md
- - Intel Debugger: salomon/software/intel-suite/intel-debugger.md
- - Intel Inspector: salomon/software/intel-suite/intel-inspector.md
- - Intel Trace Analyzer and Collector: salomon/software/intel-suite/intel-trace-analyzer-and-collector.md
- - Intel Advisor: salomon/software/intel-suite/intel-advisor.md
- - ' Salomon Cluster MPI':
- - Introduction: salomon/software/mpi/mpi.md
- - MPI4Py (MPI for Python): salomon/software/mpi/mpi4py-mpi-for-python.md
- - Running OpenMPI: salomon/software/mpi/Running_OpenMPI.md
- - ' Salomon Cluster Debuggers':
- - Introduction: salomon/software/debuggers/Introduction.md
- - Valgrind: salomon/software/debuggers/valgrind.md
- - Allinea Forge (DDT,MAP): salomon/software/debuggers/allinea-ddt.md
- - Total View: salomon/software/debuggers/total-view.md
- - Intel VTune Amplifier XE: salomon/software/debuggers/intel-vtune-amplifier.md
- - Aislinn: salomon/software/debuggers/aislinn.md
- - Allinea Performance Reports: salomon/software/debuggers/allinea-performance-reports.md
- - Vampir: salomon/software/debuggers/vampir.md
- - ' Salomon Cluster Numerical Languages':
- - Introduction: salomon/software/numerical-languages/introduction.md
- - R: salomon/software/numerical-languages/r.md
- - Matlab: salomon/software/numerical-languages/matlab.md
- - Octave: salomon/software/numerical-languages/octave.md
- - ' Salomon Cluster Chemistry':
- - Molpro: salomon/software/chemistry/molpro.md
- - Phono3py: salomon/software/chemistry/phono3py.md
- - NWChem: salomon/software/chemistry/nwchem.md
- - ' Salomon Cluster Comsol':
- - COMSOL: salomon/software/comsol/comsol-multiphysics.md
- - Licensing and Available Versions: salomon/software/comsol/licensing-and-available-versions.md
- - ' Salomon Cluster Ansys':
- - Introduction: salomon/software/ansys/ansys.md
- - Workbench: salomon/software/ansys/workbench.md
- - ANSYS CFX: salomon/software/ansys/ansys-cfx.md
- - ANSYS LS-DYNA: salomon/software/ansys/ansys-ls-dyna.md
- - ANSYS MAPDL: salomon/software/ansys/ansys-mechanical-apdl.md
- - ANSYS Fluent: salomon/software/ansys/ansys-fluent.md
- - Setting license preferences: salomon/software/ansys/licensing.md
- - Licensing and Available Versions: salomon/software/ansys/setting-license-preferences.md
+ - 'Intel Suite':
+ - Introduction: salomon/software/intel-suite/intel-parallel-studio-introduction.md
+ - Intel MKL: salomon/software/intel-suite/intel-mkl.md
+ - Intel Compilers: salomon/software/intel-suite/intel-compilers.md
+ - Intel IPP: salomon/software/intel-suite/intel-integrated-performance-primitives.md
+ - Intel TBB: salomon/software/intel-suite/intel-tbb.md
+ - Intel Debugger: salomon/software/intel-suite/intel-debugger.md
+ - Intel Inspector: salomon/software/intel-suite/intel-inspector.md
+ - Intel Trace Analyzer and Collector: salomon/software/intel-suite/intel-trace-analyzer-and-collector.md
+ - Intel Advisor: salomon/software/intel-suite/intel-advisor.md
+ - 'MPI':
+ - Introduction: salomon/software/mpi/mpi.md
+ - MPI4Py (MPI for Python): salomon/software/mpi/mpi4py-mpi-for-python.md
+ - Running OpenMPI: salomon/software/mpi/Running_OpenMPI.md
+ - 'Debuggers':
+ - Introduction: salomon/software/debuggers/Introduction.md
+ - Valgrind: salomon/software/debuggers/valgrind.md
+ - Allinea Forge (DDT,MAP): salomon/software/debuggers/allinea-ddt.md
+ - Total View: salomon/software/debuggers/total-view.md
+ - Intel VTune Amplifier XE: salomon/software/debuggers/intel-vtune-amplifier.md
+ - Aislinn: salomon/software/debuggers/aislinn.md
+ - Allinea Performance Reports: salomon/software/debuggers/allinea-performance-reports.md
+ - Vampir: salomon/software/debuggers/vampir.md
+ - 'Numerical Languages':
+ - Introduction: salomon/software/numerical-languages/introduction.md
+ - R: salomon/software/numerical-languages/r.md
+ - Matlab: salomon/software/numerical-languages/matlab.md
+ - Octave: salomon/software/numerical-languages/octave.md
+ - 'Chemistry':
+ - Molpro: salomon/software/chemistry/molpro.md
+ - Phono3py: salomon/software/chemistry/phono3py.md
+ - NWChem: salomon/software/chemistry/nwchem.md
+ - 'Comsol':
+ - COMSOL: salomon/software/comsol/comsol-multiphysics.md
+ - Licensing and Available Versions: salomon/software/comsol/licensing-and-available-versions.md
+ - 'Ansys':
+ - Introduction: salomon/software/ansys/ansys.md
+ - Workbench: salomon/software/ansys/workbench.md
+ - ANSYS CFX: salomon/software/ansys/ansys-cfx.md
+ - ANSYS LS-DYNA: salomon/software/ansys/ansys-ls-dyna.md
+ - ANSYS MAPDL: salomon/software/ansys/ansys-mechanical-apdl.md
+ - ANSYS Fluent: salomon/software/ansys/ansys-fluent.md
+ - Setting license preferences: salomon/software/ansys/licensing.md
+ - Licensing and Available Versions: salomon/software/ansys/setting-license-preferences.md
- PBSPro Documentation: pbspro-documentation/pbspro.md
+ - Colors: colors.md
+ - All modules: all_modules.md
extra:
- logo: img/logo2.png
+ #logo: img/logo2.png
palette:
primary: 'grey'
- accent: 'light blue'
+ accent: 'yellow'
font:
- text: 'Roboto'
- code: 'Roboto Mono'
+ text: 'Ubuntu'
+ code: 'Ubuntu Mono'
i18n:
prev: 'Previous'
next: 'Next'
markdown_extensions:
- - codehilite(css_class=code)
+ - codehilite
- admonition
- toc:
- permalink: '#'
+ permalink: '(H)'