Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
SCS
easyconfigs-it4i
Commits
e6e62b82
Commit
e6e62b82
authored
Mar 10, 2017
by
Lukáš Krupčík
Browse files
Salomon ... Oprava OpenMPI/1.10.2-GCC-4.9.3-2.25 && GROMACS/5.1.4-foss-2016a-hybrid-single-PLUMED
parent
24bfd69f
Changes
5
Hide whitespace changes
Inline
Side-by-side
g/GROMACS/GROMACS-5.1.4-foss-2016a-hybrid-single-PLUMED.eb
View file @
e6e62b82
...
...
@@ -12,18 +12,13 @@ toolchainopts = {'openmp': True, 'usempi': True}
source_urls = ['ftp://ftp.gromacs.org/pub/gromacs/']
sources = [SOURCELOWER_TAR_GZ]
builddependencies = [
('CMake', '3.7.2', '', ('dummy', '')), # We are using system CMake
('libxml2', '2.9.2', '', ('dummy', '')),
('almost', '2.1.0'),
('libmatheval', '1.1.8')
]
preconfigopts = 'plumed patch -p &&'
preconfigopts = 'plumed patch -p -e gromacs-5.1.0 --shared &&'
configopts = ' -DGMX_GPU=ON -DGMX_DOUBLE=OFF -DGMX_SIMD=AVX_128_FMA'
configopts = ' -DGMX_GPU=OFF -DGMX_DOUBLE=OFF -DGMX_SIMD=AVX2_256'
dependencies = [
('CMake', '3.7.2', '', ('dummy', '')),
('libxml2', '2.9.2', '', ('dummy', '')),
('Boost', '1.61.0', '-serial'),
('almost', '2.1.0'),
('libmatheval', '1.1.8'),
...
...
harmonization.sh
0 → 100755
View file @
e6e62b82
# !/bin/bash
echo
""
echo
"Harmonization easyconfig"
cd
/apps/easybuild
cd
easyconfigs-it4i
echo
-n
"== easyconfigs-it4i ["
git pull
--rebase
>
/dev/null 2>/dev/null
&&
echo
"OK]"
||
echo
"FALSE]"
echo
-n
"== easyconfigs-master ["
cd
../easyconfigs-master
git pull
--rebase
>
/dev/null 2>/dev/null
&&
echo
"OK]"
||
echo
"FALSE]"
cd
../easyconfigs-develop
echo
-n
"== easyconfigs-develop ["
git pull
--rebase
>
/dev/null 2>/dev/null
&&
echo
"OK]"
||
echo
"FALSE]"
cd
..
echo
""
i/ipp/ipp-2017.1.132-GCC-6.3.0-2.27.eb
0 → 100644
View file @
e6e62b82
name = 'ipp'
version = '2017.1.132'
homepage = 'http://software.intel.com/en-us/articles/intel-ipp/'
description = """Intel Integrated Performance Primitives (Intel IPP) is an extensive library
of multicore-ready, highly optimized software functions for multimedia, data processing,
and communications applications. Intel IPP offers thousands of optimized functions
covering frequently used fundamental algorithms."""
toolchain = {'name': 'dummy', 'version': 'dummy'}
sources = ['l_ipp_%(version)s.tgz']
gccver = '6.3.0'
binutilsver = '2.27'
versionsuffix = '-GCC-%s-%s' % (gccver, binutilsver)
dependencies = [
('GCCcore', gccver),
('binutils', binutilsver, '', ('GCCcore', gccver)),
]
dontcreateinstalldir = 'True'
# license file
license_file = HOME + '/licenses/intel/license.lic'
moduleclass = 'perf'
i/ipp/ipp-2017.2.174-GCC-6.3.0-2.27.eb
0 → 100644
View file @
e6e62b82
name = 'ipp'
version = '2017.2.174'
homepage = 'http://software.intel.com/en-us/articles/intel-ipp/'
description = """Intel Integrated Performance Primitives (Intel IPP) is an extensive library
of multicore-ready, highly optimized software functions for multimedia, data processing,
and communications applications. Intel IPP offers thousands of optimized functions
covering frequently used fundamental algorithms."""
toolchain = {'name': 'dummy', 'version': 'dummy'}
sources = ['l_ipp_%(version)s.tgz']
gccver = '6.3.0'
binutilsver = '2.27'
versionsuffix = '-GCC-%s-%s' % (gccver, binutilsver)
dependencies = [
('GCCcore', gccver),
('binutils', binutilsver, '', ('GCCcore', gccver)),
]
dontcreateinstalldir = 'True'
# license file
license_file = HOME + '/licenses/intel/license.lic'
moduleclass = 'perf'
o/OpenMPI/OpenMPI-1.10.2-GCC-4.9.3-2.25.eb
0 → 100644
View file @
e6e62b82
easyblock = 'ConfigureMake'
name = 'OpenMPI'
version = '1.10.2'
homepage = 'http://www.open-mpi.org/'
description = """The Open MPI Project is an open source MPI-2 implementation."""
toolchain = {'name': 'GCC', 'version': '4.9.3-2.25'}
sources = [SOURCELOWER_TAR_GZ]
source_urls = ['http://www.open-mpi.org/software/ompi/v%(version_major_minor)s/downloads']
dependencies = [('hwloc', '1.11.2')]
configopts = '--with-threads=posix --enable-shared --enable-mpi-thread-multiple --with-verbs '
configopts += '--enable-mpirun-prefix-by-default ' # suppress failure modes in relation to mpirun path
configopts += '--with-hwloc=$EBROOTHWLOC ' # hwloc support
configopts += '--disable-dlopen ' # statically link component, don't do dynamic loading
configopts += '--with-tm=/opt/pbs/default ' # Enable PBS
# for PBS Pro 13
preconfigopts = 'export LIBS="-ldl" && '
# needed for --with-verbs
osdependencies = [('libibverbs-dev', 'libibverbs-devel')]
libs = ["mpi_cxx", "mpi_mpifh", "mpi", "ompitrace", "open-pal", "open-rte", "vt", "vt-hyb", "vt-mpi", "vt-mpi-unify"]
sanity_check_paths = {
'files': ["bin/%s" % binfile for binfile in ["ompi_info", "opal_wrapper", "orterun"]] +
["lib/lib%s.%s" % (libfile, SHLIB_EXT) for libfile in libs] +
["include/%s.h" % x for x in ["mpi-ext", "mpif-config", "mpif", "mpi", "mpi_portable_platform"]],
'dirs': ["include/openmpi/ompi/mpi/cxx"],
}
moduleclass = 'mpi'
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment