add Salomon

CentOS/6.9-MIC/CentOS-6.9-MIC-Bootstrap

@@ -16,10 +16,10 @@ yum -y install acl acpid alsa-lib alsa-lib-devel amtu apr aspell at atk atk-deve
 cd /tmp
 
 # OpenMPI
-wget https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.0.tar.gz
-tar xvf openmpi-2.1.0.tar.gz && cd openmpi-2.1.0
+wget https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.1.tar.gz
+tar xvf openmpi-2.1.1.tar.gz && cd openmpi-2.1.1
 ./configure --prefix=/usr/local
-make -j 14
+make -j 16
 make install
 
 # pip

install/CENTOS69MIC

@@ -16,10 +16,10 @@ yum -y install acl acpid alsa-lib alsa-lib-devel amtu apr aspell at atk atk-deve
 cd /tmp
 
 # OpenMPI
-wget https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.0.tar.gz
-tar xvf openmpi-2.1.0.tar.gz && cd openmpi-2.1.0
+wget https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.1.tar.gz
+tar xvf openmpi-2.1.1.tar.gz && cd openmpi-2.1.1
 ./configure --prefix=/usr/local
-make -j 14
+make -j 16
 make install
 
 # pip

install/UBUNTUMIC

+Bootstrap: docker
+From: ubuntu:latest
+
+%setup
+cp /opt/mpss /tmp -R
+cp ./rpm.tar.gz /tmp0
+
+%post
+apt -y update && apt -y upgrade
+apt -y install python curl wget gcc g++ make vim mc libncurses-dev rsync tclsh lua5.2 liblua5.2 gfortran ssh
+
+curl -s -O https://bootstrap.pypa.io/get-pip.py
+python get-pip.py
+pip install setuptools python-graph-core python-graph-dot tabulate numpy scipy pandas wheel --upgrade
+
+wget https://github.com/luarocks/luarocks/archive/v2.4.2.tar.gz
+tar xvf v2.4.2.tar.gz
+cd luarocks-2.4.2
+./configure
+make build
+make install
+mkdir ~/.luarocks
+echo "fs_use_modules = false" > ~/.luarocks/config.lua
+luarocks install luaposix
+luarocks install luafilesystem
+LUAROCKS_PREFIX=/usr/local
+export LUA_PATH="$LUAROCKS_PREFIX/share/lua/5.1/?.lua;$LUAROCKS_PREFIX/share/lua/5.1/?/init.lua;;"
+export LUA_CPATH="$LUAROCKS_PREFIX/lib/lua/5.1/?.so;;"
+
+echo "# !/bin/bash" > /bin/logger
+echo "exit 0" >> /bin/logger
+chmod +x /bin/logger
+
+# Lmod
+wget https://github.com/TACC/Lmod/archive/7.7.7.tar.gz
+tar xvf 7.7.7.tar.gz
+cd Lmod-7.7.7
+./configure --prefix=/opt/apps
+make install
+
+# OpenMPI
+wget https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.1.tar.gz
+tar xvf openmpi-2.1.1.tar.gz && cd openmpi-2.1.1
+./configure --prefix=/usr/local
+make -j 16
+make install
+
+# APPS and SCRATCH
+mkdir /apps
+mkdir /scratch
+
+cd /bin
+rm sh && ln -s /bin/bash sh
+
+# mpss
+mv /tmp/mpss /opt/mpss
+find /opt -exec chmod 0755 {} \;
+cd /tmp
+tar xvf rpm.tar.gz
+cd rpm
+rpm -i *.rpm
+
+%environment
+source /opt/apps/lmod/7.7.7/init/profile
+clearMT
+export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/lib
+export -f ml
+export -f module
+export -f clearMT

install/install.sh

@@ -266,7 +266,7 @@ do
 done
 
 if [ -f "image.img" ]; then
-   mkdir -p "$IMAGE_PATH/$IMAGE/$VERSION$TYPE/"
+   mkdir -p "$IMAGE_PATH/$IMAGE/$VERSION$TYPE/" && chmod 0755 $IMAGE_PATH/$IMAGE/$VERSION$TYPE/ -R && chown $USER_IMAGE:$USER_IMAGE $IMAGE_PATH/$IMAGE/$VERSION$TYPE/ -R
    echo -n "Copy image to $IMAGE_PATH/$IMAGE/$VERSION$TYPE/$IMAGE-$VERSION${TYPE}_${DATE}.img .......................................... ["
    mv image.img "$IMAGE_PATH/$IMAGE/$VERSION$TYPE/$IMAGE-$VERSION${TYPE}_${DATE}.img" || ( echo -e "\e[31mFALSE\e[0m]" && exit 1 ) && echo -e "\e[32mOK\e[0m]"
    echo -n "chown $USER_IMAGE:$USER_IMAGE $IMAGE_PATH/$IMAGE/$VERSION$TYPE/$IMAGE-$VERSION${TYPE}_${DATE}.img .............................. ["