Scifio test

pom.xml

@@ -5,8 +5,14 @@
     <modelVersion>4.0.0</modelVersion>
 
 
+    <parent>
+        <groupId>org.scijava</groupId>
+        <artifactId>pom-scijava</artifactId>
+        <version>26.0.0</version>
+        <relativePath/>
+    </parent>
 
-<!--    <groupId>org.scijava</groupId>-->
+    <!--    <groupId>org.scijava</groupId>-->
     <groupId>org.azgra</groupId>
     <artifactId>DataCompressor</artifactId>
     <version>1.0-SNAPSHOT</version>
@@ -23,6 +29,13 @@
         </plugins>
     </build>
 
+    <repositories>
+        <repository>
+            <id>scijava.public</id>
+            <url>https://maven.scijava.org/content/groups/public</url>
+        </repository>
+    </repositories>
+
     <dependencies>
         <dependency>
             <groupId>org.apache.commons</groupId>
@@ -45,6 +58,10 @@
             <artifactId>gson</artifactId>
             <version>2.8.6</version>
         </dependency>
+        <dependency>
+            <groupId>io.scif</groupId>
+            <artifactId>scifio</artifactId>
+        </dependency>
     </dependencies>
 
 

src/main/java/DataCompressor.java

 import compression.benchmark.ScalarQuantizationBenchmark;
 import compression.benchmark.VectorQuantizationBenchmark;
 import compression.data.*;
+import io.scif.Plane;
+import io.scif.Reader;
+import io.scif.SCIFIO;
 
 import java.io.IOException;
 import java.util.Random;
@@ -8,9 +11,25 @@ import java.util.Random;
 
 public class DataCompressor {
 
-
     public static void main(String[] args) throws IOException {
 
+        SCIFIO scifio = new SCIFIO();
+        final String file = "D:\\tmp\\fused_tp_10_ch_0.tif";
+        final Reader reader;
+        try {
+            reader = scifio.initializer().initializeReader(file);
+
+            final long placeCount0 = reader.getPlaneCount(0);
+
+            final Plane plane = reader.openPlane(0, 1);
+            System.out.println("Plane (0,0) byte count: " + plane.getBytes().length);
+
+
+            scifio.getContext().dispose();
+
+        } catch (Exception e) {
+            e.printStackTrace();
+        }
 
         //        test2DChunking();
         //        test3DChunking();
@@ -28,7 +47,7 @@ public class DataCompressor {
                     new int[]{351},
                     new V3i(1041, 996, 946));
 
-            vqBench.startBenchmark(new V2i(3,3));
+            vqBench.startBenchmark(new V2i(3, 3));
         }
     }