Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
Q
QcmpCompressionLibrary
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package registry
Container registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
BioinformaticDataCompression
QcmpCompressionLibrary
Commits
ed22a231
Commit
ed22a231
authored
4 years ago
by
Vojtech Moravec
Browse files
Options
Downloads
Patches
Plain Diff
Add ImageDecompressor ctor with ICacheFile.
Also prepare stream decompress method.
parent
46cedfe5
No related branches found
No related tags found
No related merge requests found
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
src/main/java/azgracompress/compression/ImageDecompressor.java
+21
-7
21 additions, 7 deletions
...ain/java/azgracompress/compression/ImageDecompressor.java
with
21 additions
and
7 deletions
src/main/java/azgracompress/compression/ImageDecompressor.java
+
21
−
7
View file @
ed22a231
package
azgracompress.compression
;
import
azgracompress.cache.ICacheFile
;
import
azgracompress.compression.exception.ImageDecompressionException
;
import
azgracompress.data.ImageU16Dataset
;
import
azgracompress.fileformat.QCMPFileHeader
;
...
...
@@ -14,8 +15,17 @@ import java.util.Optional;
@SuppressWarnings
(
"DuplicatedCode"
)
public
class
ImageDecompressor
extends
CompressorDecompressorBase
{
public
ImageDecompressor
(
CompressionOptions
options
)
{
super
(
options
);
private
IImageDecompressor
cachedDecompressor
=
null
;
public
ImageDecompressor
(
final
CompressionOptions
passedOptions
)
{
super
(
passedOptions
);
}
public
ImageDecompressor
(
final
ICacheFile
codebookCacheFile
)
{
this
(
new
CompressionOptions
(
codebookCacheFile
));
cachedDecompressor
=
getImageDecompressor
(
options
.
getQuantizationType
());
cachedDecompressor
.
preloadGlobalCodebook
(
codebookCacheFile
);
}
/**
...
...
@@ -39,9 +49,9 @@ public class ImageDecompressor extends CompressorDecompressorBase {
*
* @return Correct implementation of image decompressor.
*/
private
IImageDecompressor
getImageDecompressor
(
final
Q
CMPFileHeader
header
)
{
private
IImageDecompressor
getImageDecompressor
(
final
Q
uantizationType
quantizationType
)
{
IImageDecompressor
decompressor
;
switch
(
header
.
getQ
uantizationType
()
)
{
switch
(
q
uantizationType
)
{
case
Scalar:
decompressor
=
new
SQImageDecompressor
(
options
);
break
;
...
...
@@ -131,7 +141,7 @@ public class ImageDecompressor extends CompressorDecompressorBase {
final
long
fileSize
=
new
File
(
options
.
getInputDataInfo
().
getFilePath
()).
length
();
final
long
dataSize
=
fileSize
-
header
.
getHeaderSize
();
final
IImageDecompressor
decompressor
=
getImageDecompressor
(
header
);
final
IImageDecompressor
decompressor
=
getImageDecompressor
(
header
.
getQuantizationType
()
);
if
(
decompressor
!=
null
)
{
final
long
expectedDataSize
=
decompressor
.
getExpectedDataSize
(
header
);
...
...
@@ -189,7 +199,7 @@ public class ImageDecompressor extends CompressorDecompressorBase {
decompressedFileSize
=
2
*
header
.
getImageDims
().
multiplyTogether
();
IImageDecompressor
imageDecompressor
=
getImageDecompressor
(
header
);
final
IImageDecompressor
imageDecompressor
=
getImageDecompressor
(
header
.
getQuantizationType
()
);
if
(
imageDecompressor
==
null
)
{
System
.
err
.
println
(
"Unable to create correct decompressor."
);
return
false
;
...
...
@@ -241,7 +251,7 @@ public class ImageDecompressor extends CompressorDecompressorBase {
if
(
header
==
null
)
return
Optional
.
empty
();
IImageDecompressor
imageDecompressor
=
getImageDecompressor
(
header
);
IImageDecompressor
imageDecompressor
=
getImageDecompressor
(
header
.
getQuantizationType
()
);
if
(
imageDecompressor
==
null
)
{
System
.
err
.
println
(
"Unable to create correct decompressor."
);
return
Optional
.
empty
();
...
...
@@ -270,6 +280,10 @@ public class ImageDecompressor extends CompressorDecompressorBase {
}
}
public
short
[]
decompressStream
(
final
InputStream
compressedStream
)
{
return
new
short
[
0
];
}
@Nullable
private
QCMPFileHeader
decompressQcmpHeader
(
DataInputStream
dataInputStream
)
throws
IOException
{
final
QCMPFileHeader
header
=
readQCMPFileHeader
(
dataInputStream
);
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment