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David Ciz
docs.it4i.cz
Commits
035c98f8
Commit
035c98f8
authored
8 years ago
by
David Hrbáč
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Script to create list of modulea for the clusters
parent
57b48ed3
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cluster_modules.py
+43
-0
43 additions, 0 deletions
cluster_modules.py
get_cvs.sh
+4
-0
4 additions, 0 deletions
get_cvs.sh
with
47 additions
and
0 deletions
cluster_modules.py
0 → 100755
+
43
−
0
View file @
035c98f8
#!/usr/bin/python
import
csv
def
get_data
(
filename
):
'''
function to read the data form the input csv file to use in the analysis
'''
reader
=
[]
# Just in case the file open fails
with
open
(
filename
,
'
rb
'
)
as
f
:
reader
=
csv
.
reader
(
f
,
delimiter
=
'
,
'
)
#returns all the data from the csv file in list form
#f.close() # May need to close the file when done
return
list
(
reader
)
# only return the reader when you have finished.
your_list
=
[]
your_list
+=
get_data
(
'
modules-anselm.csv
'
)
your_list
+=
get_data
(
'
modules-salomon.csv
'
)
#print your_list
a
=
[[
"
python/2.8.1
"
,
1
],[
"
python/2.9.1
"
,
2
],[
"
python/2.8.1
"
,
4
],[
"
python/3.0.1
"
,
4
]]
counts
=
dict
()
for
i
in
your_list
:
#print i[0]
#print int(i[1])
counts
[
i
[
0
]]
=
counts
.
get
(
i
[
0
],
0
)
+
int
(
i
[
1
])
#print counts
c
=
[
"
---
"
,
"
--A
"
,
"
-S-
"
,
"
-SA
"
,
"
U--
"
,
"
U-A
"
,
"
US-
"
,
"
USA
"
,
]
print
"
| Module | Clusters |
"
print
"
| ------ | -------- |
"
for
m
,
i
in
counts
.
iteritems
():
print
"
| %s | %s |
"
%
(
m
,
c
[
i
])
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get_cvs.sh
0 → 100755
+
4
−
0
View file @
035c98f8
#!/bin/bash
curl
-s
https://code.it4i.cz/hrb33/modules-anselm/raw/master/anselm.csv
-o
modules-anselm.csv
curl
-s
https://code.it4i.cz/hrb33/modules-salomon/raw/master/salomon.csv
-o
modules-salomon.csv
#curl -s https://code.it4i.cz/hrb33/modules-salomon/raw/master/salomon-uv.csv -o modules-salomon-uv.csv
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