Merge branch 'content_revision' into 'master'

Content revision

See merge request !92

docs.it4i/anselm/software/omics-master/overview.md

@@ -63,19 +63,19 @@ The SAM format (1) consists of one header section and one alignment section. The
 In SAM, each alignment line has 11 mandatory fields and a variable number of optional fields. The mandatory fields are briefly described in Table 1. They must be present but their value can be a ‘\’ or a zero (depending on the field) if the
 corresponding information is unavailable.
 
-|  No.  |  Name  |  Description                                      |
+|  No.      |  Name      |  Description                                          |
 | --------- | ---------- | ----------------------------------------------------- |
 | 1         | QNAME      | Query NAME of the read or the read pai                |
 | 2         | FLAG       | Bitwise FLAG (pairing,strand,mate strand,etc.)        |
-| 3         | RNAME      | <p>Reference sequence NAME                            |
-| 4         | POS        | <p>1-Based leftmost POSition of clipped alignment    |
-| 5         | MAPQ       | <p>MAPping Quality (Phred-scaled)                     |
-| 6         | CIGAR      | <p>Extended CIGAR string (operations:MIDNSHP)         |
-| 7         | MRNM       | <p>Mate REference NaMe ('=' if same RNAME)            |
-| 8         | MPOS       | <p>1-Based leftmost Mate POSition                     |
-| 9         | ISIZE      | <p>Inferred Insert SIZE                               |
-| 10        | SEQ        | <p>Query SEQuence on the same strand as the reference |
-| 11        | QUAL       | <p>Query QUALity (ASCII-33=Phred base quality)        |
+| 3         | RNAME      | Reference sequence NAME                               |
+| 4         | POS        | 1-Based leftmost POSition of clipped alignment        |
+| 5         | MAPQ       | MAPping Quality (Phred-scaled)                        |
+| 6         | CIGAR      | Extended CIGAR string (operations:MIDNSHP)            |
+| 7         | MRNM       | Mate REference NaMe ('=' if same RNAME)               |
+| 8         | MPOS       | 1-Based leftmost Mate POSition                        |
+| 9         | ISIZE      | Inferred Insert SIZE                                  |
+| 10        | SEQ        | Query SEQuence on the same strand as the reference    |
+| 11        | QUAL       | Query QUALity (ASCII-33=Phred base quality)           |
 
  Table 1 . Mandatory fields in the SAM format.