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fix: iss1129

Merged Jan Kožusznik requested to merge iss1129 into master
1 file
+ 11
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package cz.it4i.fiji.haas_spim_benchmark.core;
package cz.it4i.fiji.haas_spim_benchmark.core;
 
import com.google.common.collect.Streams;
 
import java.util.Arrays;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collection;
import java.util.Collections;
import java.util.Collections;
@@ -10,8 +12,8 @@ import java.util.Scanner;
@@ -10,8 +12,8 @@ import java.util.Scanner;
import java.util.stream.Collectors;
import java.util.stream.Collectors;
import org.apache.commons.math3.util.Pair;
import org.apache.commons.math3.util.Pair;
import org.slf4j.Logger;
import com.google.common.collect.Streams;
import org.slf4j.LoggerFactory;
import cz.it4i.fiji.haas_java_client.JobState;
import cz.it4i.fiji.haas_java_client.JobState;
import cz.it4i.fiji.haas_java_client.SynchronizableFileType;
import cz.it4i.fiji.haas_java_client.SynchronizableFileType;
@@ -19,6 +21,9 @@ import cz.it4i.fiji.haas_java_client.SynchronizableFileType;
@@ -19,6 +21,9 @@ import cz.it4i.fiji.haas_java_client.SynchronizableFileType;
public class TaskComputation {
public class TaskComputation {
 
public static final Logger log = LoggerFactory.getLogger(
 
cz.it4i.fiji.haas_spim_benchmark.core.TaskComputation.class);
 
public static class Log {
public static class Log {
final private String name;
final private String name;
final private String content;
final private String content;
@@ -249,8 +254,10 @@ public class TaskComputation {
@@ -249,8 +254,10 @@ public class TaskComputation {
}
}
}
}
scanner.close();
scanner.close();
if (log.isDebugEnabled()) {
return !(inputs == null || id == null);
log.debug("Job parameters resolved id = {}, inputs = {}", id, inputs);
 
}
 
return id == null;
}
}
private String getSnakemakeOutput() {
private String getSnakemakeOutput() {
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