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Created with Raphaël 2.2.019Oct23May23Jan25Aug2215Jul1416Jun1510986321May19181128Apr2711Mar717Jan810Dec26Nov30Oct2011Aug542129Jul28242019181716151413987532130Jun251514121110975431May28272624232218Update config.yamlmastermasterSupport for fix bioformatsMerge pull request #31 from psteinb/join_paths_instead_of_concatusing os.path.join for stitching together pathsfixed missing file name flagformatting revisited, added partition flagsadded the os.path.join functionMerge pull request #27 from psteinb/update_from_cschmiedwhitespace clean-upMerge branch 'master' of github.com:schmiedc/snakemake-workflows into update_from_cschmiedFixed Illumination side 0,1 bugModified luxendo resaveAdded export of .h5 luxendo files to .tifChanged comment in config.yamlMerge pull request #21 from schmiedc/masterFixed bug in downsampling: missing string downsample_imagesfixed insertion of nthreads for x264, dropped default configfilenew configfileMerge pull request #28 from mpicbg-scicomp/masterh265 works as dryrunffmpeg_scansffmpeg_scansremoved obsolete prefix in command_tag for csv fileh264 scan runningstarted ffmpeg-scan makefile and configupdated slurm commands and removed redundant task requestsrenamed benchmarksadded readme markdown for cluster_toolsremoved xvfb-run due to licensing issueMerge branch 'benchmark-example' into adapt_to_slurmminor updates to config file, so that it is less dependent on absolute pathsbenchmarks are running now and producing sounds resultsMerge pull request #27 from mpicbg-scicomp/masterready to rock for cluster submissionadded new directory with benchmark Snakefileplaying around with xvfb-run showed that xvfb-run yields a bug that makes subjobs failremoved all temporaries as this breaks rule.xxx.output use for input filesfix_for_snakema…fix_for_snakemake_lt_342Merge pull request #19 from schmiedc/masterfixed typo in documentation of config.yamlMerge pull request #18 from schmiedc/masterFixed typo of config.yamlFixed typo in documentation