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MolDyn
lib4neuro
Commits
f340b484
Commit
f340b484
authored
6 years ago
by
Martin Beseda
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FIX: Fixed generating of isotropic data
parent
5907699f
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2
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2 changed files
src/DataSet/DataSet.cpp
+69
-1
69 additions, 1 deletion
src/DataSet/DataSet.cpp
src/DataSet/DataSet.h
+20
-0
20 additions, 0 deletions
src/DataSet/DataSet.h
with
89 additions
and
1 deletion
src/DataSet/DataSet.cpp
+
69
−
1
View file @
f340b484
...
...
@@ -33,13 +33,24 @@ DataSet::DataSet(std::vector<std::pair<std::vector<double>, std::vector<double>>
DataSet
::
DataSet
(
double
lower_bound
,
double
upper_bound
,
unsigned
int
size
,
double
output
)
{
std
::
vector
<
std
::
pair
<
std
::
vector
<
double
>
,
std
::
vector
<
double
>>>
new_data_vec
;
this
->
data
=
new_data_vec
;
this
->
n_elements
=
size
;
this
->
n_elements
=
0
;
this
->
input_dim
=
1
;
this
->
output_dim
=
1
;
this
->
add_isotropic_data
(
lower_bound
,
upper_bound
,
size
,
output
);
}
DataSet
::
DataSet
(
std
::
vector
<
double
>
bounds
,
unsigned
int
no_elems_in_one_dim
,
std
::
vector
<
double
>
(
*
output_func
)(
std
::
vector
<
double
>
),
unsigned
int
output_dim
)
{
std
::
vector
<
std
::
pair
<
std
::
vector
<
double
>
,
std
::
vector
<
double
>>>
new_data_vec
;
this
->
data
=
new_data_vec
;
this
->
input_dim
=
bounds
.
size
()
/
2
;
this
->
output_dim
=
output_dim
;
this
->
n_elements
=
0
;
this
->
add_isotropic_data
(
bounds
,
no_elems_in_one_dim
,
output_func
);
}
void
DataSet
::
add_data_pair
(
std
::
vector
<
double
>
inputs
,
std
::
vector
<
double
>
outputs
)
{
if
(
inputs
.
size
()
!=
this
->
input_dim
)
{
throw
InvalidDimension
(
"Bad input dimension."
);
...
...
@@ -66,6 +77,33 @@ void DataSet::add_isotropic_data(double lower_bound, double upper_bound, unsigne
inp
=
{
frac
*
i
};
this
->
data
.
emplace_back
(
std
::
make_pair
(
inp
,
out
));
}
this
->
n_elements
+=
size
;
}
void
DataSet
::
add_isotropic_data
(
std
::
vector
<
double
>
bounds
,
unsigned
int
no_elems_in_one_dim
,
std
::
vector
<
double
>
(
*
output_func
)(
std
::
vector
<
double
>
))
{
// TODO add check of dataset dimensions
std
::
vector
<
std
::
vector
<
double
>>
grid
;
std
::
vector
<
double
>
tmp
;
double
frac
;
for
(
unsigned
int
i
=
0
;
i
<
bounds
.
size
();
i
+=
2
)
{
frac
=
(
bounds
[
i
]
+
bounds
[
i
+
1
])
/
(
no_elems_in_one_dim
-
1
);
tmp
.
clear
();
for
(
double
j
=
bounds
[
i
];
j
<=
bounds
[
i
+
1
];
j
+=
frac
)
{
tmp
.
emplace_back
(
j
);
}
grid
.
emplace_back
(
tmp
);
}
grid
=
this
->
cartesian_product
(
&
grid
);
for
(
const
auto
&
vec
:
grid
)
{
this
->
n_elements
++
;
this
->
data
.
emplace_back
(
std
::
make_pair
(
vec
,
output_func
(
vec
)));
}
}
std
::
vector
<
std
::
pair
<
std
::
vector
<
double
>
,
std
::
vector
<
double
>>>*
DataSet
::
get_data
()
{
...
...
@@ -110,4 +148,34 @@ void DataSet::store_text(std::string file_path) {
boost
::
archive
::
text_oarchive
oa
(
ofs
);
oa
<<
*
this
;
ofs
.
close
();
}
template
<
class
T
>
std
::
vector
<
std
::
vector
<
T
>>
DataSet
::
cartesian_product
(
const
std
::
vector
<
std
::
vector
<
T
>>*
v
)
{
std
::
vector
<
std
::
vector
<
double
>>
v_combined_old
,
v_combined
,
v_tmp
;
std
::
vector
<
double
>
tmp
;
for
(
const
auto
&
e
:
v
->
at
(
0
))
{
tmp
=
{
e
};
v_combined
.
emplace_back
(
tmp
);
}
for
(
unsigned
int
i
=
1
;
i
<
v
->
size
();
i
++
)
{
// Iterate through remaining vectors of 'v'
v_combined_old
=
v_combined
;
v_combined
.
clear
();
for
(
const
auto
&
e
:
v
->
at
(
i
))
{
for
(
const
auto
&
vec
:
v_combined_old
)
{
tmp
=
vec
;
tmp
.
emplace_back
(
e
);
/* Add only unique elements */
if
(
std
::
find
(
v_combined
.
begin
(),
v_combined
.
end
(),
tmp
)
==
v_combined
.
end
())
{
v_combined
.
emplace_back
(
tmp
);
}
}
}
}
return
v_combined
;
}
\ No newline at end of file
This diff is collapsed.
Click to expand it.
src/DataSet/DataSet.h
+
20
−
0
View file @
f340b484
...
...
@@ -12,6 +12,7 @@
#include
<boost/range/size_type.hpp>
#include
<exception>
#include
<string>
#include
<functional>
/**
* Class representing an error caused by an incorrect
...
...
@@ -61,6 +62,9 @@ private:
*/
std
::
vector
<
std
::
pair
<
std
::
vector
<
double
>
,
std
::
vector
<
double
>>>
data
;
template
<
class
T
>
std
::
vector
<
std
::
vector
<
T
>>
cartesian_product
(
const
std
::
vector
<
std
::
vector
<
T
>>*
v
);
protected:
/**
* Serialization function
...
...
@@ -165,6 +169,8 @@ public:
*/
DataSet
(
double
lower_bound
,
double
upper_bound
,
unsigned
int
size
,
double
output
);
DataSet
(
std
::
vector
<
double
>
bounds
,
unsigned
int
no_elems_in_one_dim
,
std
::
vector
<
double
>
(
*
output_func
)(
std
::
vector
<
double
>
),
unsigned
int
output_dim
);
/**
* Getter for number of elements
* @return Number of elements in the data set
...
...
@@ -212,6 +218,20 @@ public:
*/
void
add_isotropic_data
(
double
lower_bound
,
double
upper_bound
,
unsigned
int
size
,
double
output
);
/**
* Adds a new data with input values equidistantly positioned
* over the certain interval and the output value
* being constant
*
* Input can have arbitrary many dimensions,
* output can be an arbitrary function
*
* @param bounds Odd values are lower bounds and even values are corresponding upper bounds
* @param size Number of input-output pairs generated
* @param output_func Function determining output value
*/
void
add_isotropic_data
(
std
::
vector
<
double
>
bounds
,
unsigned
int
no_elems_in_one_dim
,
std
::
vector
<
double
>
(
*
output_func
)(
std
::
vector
<
double
>
));
//TODO Chebyshev - ch. interpolation points, i-th point = cos(i*alpha) from 0 to pi
/**
...
...
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