Some files with good spelling merged with master

.spelling

@@ -33,6 +33,7 @@ TotalView
 Valgrind
 ParaView
 OpenFOAM
+MAX_FAIRSHARE
 MPI4Py
 MPICH2
 PETSc
@@ -86,6 +87,173 @@ AnyConnect
 X11
 backfilling
 backfilled
+SCP
+Lustre
+QDR
+TFLOP
+ncpus
+myjob
+pernode
+mpiprocs
+ompthreads
+qprace
+runtime
+SVS
+ppn
+Multiphysics
+aeroacoustics
+turbomachinery
+CFD
+LS-DYNA
+APDL
+MAPDL
+multiphysics
+AUTODYN
+RSM
+Molpro
+initio
+parallelization
+NWChem
+SCF
+ISV
+profiler
+Pthreads
+profilers
+OTF
+PAPI
+PCM
+uncore
+pre-processing
+prepend
+CXX
+prepended
+POMP2
+Memcheck
+unaddressable
+OTF2
+GPI-2
+GASPI
+GPI
+MKL
+IPP
+TBB
+GSL
+Omics
+VNC
+Scalasca
+IFORT
+interprocedural
+IDB
+cloop
+qcow
+qcow2
+vmdk
+vdi
+virtio
+paravirtualized
+Gbit
+tap0
+UDP
+TCP
+preload
+qfat
+Rmpi
+DCT
+datasets
+dataset
+preconditioners
+partitioners
+PARDISO
+PaStiX
+SuiteSparse
+SuperLU
+ExodusII
+NetCDF
+ParMETIS
+multigrid
+HYPRE
+SPAI
+Epetra
+EpetraExt
+Tpetra
+64-bit
+Belos
+GMRES
+Amesos
+IFPACK
+preconditioner
+Teuchos
+Makefiles
+SAXPY
+NVCC
+VCF
+HGMD
+HUMSAVAR
+ClinVar
+indels
+CIBERER
+exomes
+tmp
+SSHFS
+RSYNC
+unmount
+Cygwin
+CygwinX
+RFB
+TightVNC
+TigerVNC
+GUIs
+XLaunch
+UTF-8
+numpad
+PuTTYgen
+OpenSSH
+IE11
+x86
+r21u01n577
+7120P
+interprocessor
+IPN
+toolchains
+toolchain
+APIs
+easyblocks
+GM200
+GeForce
+GTX
+IRUs
+ASIC
+backplane
+ICEX
+IRU
+PFLOP
+T950B
+ifconfig
+inet
+addr
+checkbox
+appfile
+programmatically
+http
+https
+filesystem
+phono3py
+HDF
+splitted
+automize
+llvm
+PGI
+GUPC
+BUPC
+IBV
+Aislinn
+nondeterminism
+stdout
+stderr
+i.e.
+pthreads
+uninitialised
+broadcasted
  - docs.it4i/anselm-cluster-documentation/environment-and-modules.md
 MODULEPATH
 bashrc
@@ -119,6 +287,7 @@ Rmax
 E5-2665
 E5-2470
 P5110
+isw
  - docs.it4i/anselm-cluster-documentation/introduction.md
 RedHat
  - docs.it4i/anselm-cluster-documentation/job-priority.md
@@ -126,6 +295,8 @@ walltime
 qexp
 _List.fairshare
 _time
+_FAIRSHARE
+1E6
  - docs.it4i/anselm-cluster-documentation/job-submission-and-execution.md
 15209.srv11
 qsub
@@ -146,6 +317,15 @@ jobscript
 cn108
 cn109
 cn110
+Name0
+cn17
+_NODEFILE
+_O
+_WORKDIR
+mympiprog.x
+_JOBID
+myprog.x
+openmpi
  - docs.it4i/anselm-cluster-documentation/network.md
 ib0
  - docs.it4i/anselm-cluster-documentation/prace.md
@@ -153,14 +333,19 @@ PRACE
 qfree
 it4ifree
 it4i.portal.clients
+prace
+1h
  - docs.it4i/anselm-cluster-documentation/shell-and-data-access.md
 VPN
  - docs.it4i/anselm-cluster-documentation/software/ansys/ansys-cfx.md
 ANSYS
 CFX
 cfx.pbs
+_r
+ane3fl
  - docs.it4i/anselm-cluster-documentation/software/ansys/ansys-mechanical-apdl.md
 mapdl.pbs
+_dy
  - docs.it4i/anselm-cluster-documentation/software/ansys/ls-dyna.md
 HPC
 lsdyna.pbs
@@ -175,9 +360,25 @@ Makefile
  - docs.it4i/anselm-cluster-documentation/software/gpi2.md
 gcc
 cn79
+helloworld
+_gpi.c
+ibverbs
+gaspi
+_logger
  - docs.it4i/anselm-cluster-documentation/software/intel-suite/intel-compilers.md
 Haswell
 CPUs
+ipo
+O3
+vec
+xAVX
+omp
+simd
+ivdep
+pragmas
+openmp
+xCORE-AVX2
+axCORE-AVX2
  - docs.it4i/anselm-cluster-documentation/software/kvirtualization.md
 rc.local
 runlevel
@@ -189,6 +390,8 @@ VDE
 smb.conf
 TMPDIR
 run.bat.
+slirp
+NATs
  - docs.it4i/anselm-cluster-documentation/software/mpi/mpi4py-mpi-for-python.md
 NumPy
  - docs.it4i/anselm-cluster-documentation/software/numerical-languages/matlab_1314.md
@@ -197,33 +400,73 @@ matlabcode.m
 output.out
 matlabcodefile
 sched
+_feature
  - docs.it4i/anselm-cluster-documentation/software/numerical-languages/matlab.md
 UV2000
+maxNumCompThreads
+SalomonPBSPro
  - docs.it4i/anselm-cluster-documentation/software/numerical-languages/octave.md
 _THREADS
+_NUM
  - docs.it4i/anselm-cluster-documentation/software/numerical-libraries/trilinos.md
 CMake-aware
 Makefile.export
+_PACKAGE
+_CXX
+_COMPILER
+_INCLUDE
+_DIRS
+_LIBRARY
  - docs.it4i/anselm-cluster-documentation/software/ansys/ansys-ls-dyna.md
 ansysdyna.pbs
  - docs.it4i/anselm-cluster-documentation/software/ansys/ansys.md
 svsfem.cz
+_
  - docs.it4i/anselm-cluster-documentation/software/debuggers/valgrind.md
 libmpiwrap-amd64-linux
+O0
+valgrind
+malloc
+_PRELOAD
  - docs.it4i/anselm-cluster-documentation/software/numerical-libraries/magma-for-intel-xeon-phi.md
 cn204
+_LIBS
+MAGMAROOT
+_magma
+_server
+_anselm
+_from
+_mic.sh
+_dgetrf
+_mic
+_03.pdf
  - docs.it4i/anselm-cluster-documentation/software/paraview.md
 cn77
 localhost
+v4.0.1
  - docs.it4i/anselm-cluster-documentation/storage.md
 ssh.du1.cesnet.cz
 Plzen
 ssh.du2.cesnet.cz
 ssh.du3.cesnet.cz
+tier1
+_home
+_cache
+_tape
  - docs.it4i/salomon/environment-and-modules.md
 icc
+ictce
+ifort
+imkl
+intel
+gompi
+goolf
+BLACS
+iompi
+iccifort
  - docs.it4i/salomon/hardware-overview.md
 HW
+E5-4627v2
  - docs.it4i/salomon/job-submission-and-execution.md
 15209.isrv5
 r21u01n577
@@ -248,6 +491,7 @@ mkdir
 mympiprog.x
 mpiexec
 myprog.x
+r4i7n0.ib0.smc.salomon.it4i.cz
  - docs.it4i/salomon/7d-enhanced-hypercube.md
 cns1
 cns576
@@ -256,7 +500,165 @@ r4i7n17
 cns577
 cns1008
 r37u31n1008
+7D
  - docs.it4i/anselm-cluster-documentation/resources-allocation-policy.md
 qsub
 it4ifree
 it4i.portal.clients
+ - docs.it4i/anselm-cluster-documentation/software/ansys/ansys-fluent.md
+anslic
+_admin
+ - docs.it4i/anselm-cluster-documentation/software/chemistry/nwchem.md
+_DIR
+ - docs.it4i/anselm-cluster-documentation/software/comsol-multiphysics.md
+EDU
+comsol
+_matlab.pbs
+_job.m
+mphstart
+ - docs.it4i/anselm-cluster-documentation/software/debuggers/allinea-performance-reports.md
+perf-report
+perf
+txt
+html
+mympiprog
+_32p
+ - docs.it4i/anselm-cluster-documentation/software/debuggers/intel-vtune-amplifier.md
+Hotspots
+ - docs.it4i/anselm-cluster-documentation/software/debuggers/scalasca.md
+scorep
+ - docs.it4i/anselm-cluster-documentation/software/isv_licenses.md
+edu
+ansys
+_features
+_state.txt
+f1
+matlab
+acfd
+_ansys
+_acfd
+_aa
+_comsol
+HEATTRANSFER
+_HEATTRANSFER
+COMSOLBATCH
+_COMSOLBATCH
+STRUCTURALMECHANICS
+_STRUCTURALMECHANICS
+_matlab
+_Toolbox
+_Image
+_Distrib
+_Comp
+_Engine
+_Acquisition
+pmode
+matlabpool
+ - docs.it4i/anselm-cluster-documentation/software/mpi/mpi.md
+mpirun
+BLAS1
+FFT
+KMP
+_AFFINITY
+GOMP
+_CPU
+bullxmpi-1
+mpich2
+ - docs.it4i/anselm-cluster-documentation/software/mpi/Running_OpenMPI.md
+bysocket
+bycore
+ - docs.it4i/anselm-cluster-documentation/software/numerical-libraries/fftw.md
+gcc3.3.3
+pthread
+fftw3
+lfftw3
+_threads-lfftw3
+_omp
+icc3.3.3
+FFTW2
+gcc2.1.5
+fftw2
+lfftw
+_threads
+icc2.1.5
+fftw-mpi3
+_mpi
+fftw3-mpi
+fftw2-mpi
+IntelMPI
+ - docs.it4i/anselm-cluster-documentation/software/numerical-libraries/gsl.md
+dwt.c
+mkl
+lgsl
+ - docs.it4i/anselm-cluster-documentation/software/numerical-libraries/hdf5.md
+icc
+hdf5
+_INC
+_SHLIB
+_CPP
+_LIB
+_F90
+gcc49
+ - docs.it4i/anselm-cluster-documentation/software/numerical-libraries/petsc.md
+_Dist
+ - docs.it4i/anselm-cluster-documentation/software/nvidia-cuda.md
+lcublas
+ - docs.it4i/anselm-cluster-documentation/software/operating-system.md
+6.x
+ - docs.it4i/get-started-with-it4innovations/accessing-the-clusters/graphical-user-interface/cygwin-and-x11-forwarding.md
+startxwin
+cygwin64binXWin.exe
+tcp
+ - docs.it4i/get-started-with-it4innovations/accessing-the-clusters/graphical-user-interface/x-window-system.md
+Xming
+XWin.exe.
+ - docs.it4i/get-started-with-it4innovations/accessing-the-clusters/shell-access-and-data-transfer/pageant.md
+_rsa.ppk
+ - docs.it4i/get-started-with-it4innovations/accessing-the-clusters/shell-access-and-data-transfer/puttygen.md
+_keys
+organization.example.com
+_rsa
+ - docs.it4i/get-started-with-it4innovations/accessing-the-clusters/shell-access-and-data-transfer/vpn-connection-fail-in-win-8.1.md
+vpnui.exe
+ - docs.it4i/salomon/ib-single-plane-topology.md
+36-port
+Mcell.pdf
+r21-r38
+nodes.pdf
+ - docs.it4i/salomon/introduction.md
+E5-2680v3
+ - docs.it4i/salomon/network.md
+r4i1n0
+r4i1n1
+r4i1n2
+r4i1n3
+ip
+ - docs.it4i/salomon/software/ansys/setting-license-preferences.md
+ansys161
+ - docs.it4i/salomon/software/ansys/workbench.md
+mpifile.txt
+solvehandlers.xml
+ - docs.it4i/salomon/software/chemistry/phono3py.md
+vasprun.xml
+disp-XXXXX
+disp
+_fc3.yaml
+ir
+_grid
+_points.yaml
+gofree-cond1
+ - docs.it4i/salomon/software/compilers.md
+HPF
+ - docs.it4i/salomon/software/comsol/licensing-and-available-versions.md
+ver
+ - docs.it4i/salomon/software/debuggers/aislinn.md
+test.cpp
+ - docs.it4i/salomon/software/debuggers/intel-vtune-amplifier.md
+vtune
+_update1
+ - docs.it4i/salomon/software/debuggers/valgrind.md
+EBROOTVALGRIND
+ - docs.it4i/salomon/software/intel-suite/intel-advisor.md
+O2
+ - docs.it4i/salomon/software/intel-suite/intel-compilers.md
+UV1

docs.it4i/anselm/environment-and-modules.md

@@ -24,7 +24,7 @@ fi
 ```
 
 !!! note
-    Do not run commands outputting to standard output (echo, module list, etc) in .bashrc for non-interactive SSH sessions. It breaks fundamental functionality (scp, PBS) of your account! Conside utilization of SSH session interactivity for such commands as stated in the previous example.
+	Do not run commands outputting to standard output (echo, module list, etc) in .bashrc for non-interactive SSH sessions. It breaks fundamental functionality (SCP, PBS) of your account! Consider utilization of SSH session interactivity for such commands as stated in the previous example.
 
 ## Application Modules
 

docs.it4i/anselm/job-submission-and-execution.md

@@ -322,7 +322,7 @@ cd $SCRDIR || exit
 cp $PBS_O_WORKDIR/input .
 cp $PBS_O_WORKDIR/mympiprog.x .
 
-# load the mpi module
+# load the MPI module
 module load openmpi
 
 # execute the calculation
@@ -360,7 +360,7 @@ Example jobscript for an MPI job with preloaded inputs and executables, options
 SCRDIR=/scratch/$USER/myjob
 cd $SCRDIR || exit
 
-# load the mpi module
+# load the MPI module
 module load openmpi
 
 # execute the calculation

docs.it4i/anselm/software/ansys/ansys-cfx.md

@@ -49,7 +49,7 @@ echo Machines: $hl
 
 Header of the PBS file (above) is common and description can be find on [this site](../../job-submission-and-execution/). SVS FEM recommends to utilize sources by keywords: nodes, ppn. These keywords allows to address directly the number of nodes (computers) and cores (ppn) which will be utilized in the job. Also the rest of code assumes such structure of allocated resources.
 
-Working directory has to be created before sending PBS job into the queue. Input file should be in working directory or full path to input file has to be specified. >Input file has to be defined by common CFX def file which is attached to the cfx solver via parameter -def
+Working directory has to be created before sending PBS job into the queue. Input file should be in working directory or full path to input file has to be specified. >Input file has to be defined by common CFX def file which is attached to the CFX solver via parameter -def
 
 **License** should be selected by parameter -P (Big letter **P**). Licensed products are the following: aa_r (ANSYS **Academic** Research), ane3fl (ANSYS Multiphysics)-**Commercial**.
 [More about licensing here](licensing/)

docs.it4i/anselm/software/debuggers/allinea-ddt.md

@@ -4,7 +4,7 @@ Allinea Forge consist of two tools - debugger DDT and profiler MAP.
 
 Allinea DDT, is a commercial debugger primarily for debugging parallel MPI or OpenMP programs. It also has a support for GPU (CUDA) and Intel Xeon Phi accelerators. DDT provides all the standard debugging features (stack trace, breakpoints, watches, view variables, threads etc.) for every thread running as part of your program, or for every process - even if these processes are distributed across a cluster using an MPI implementation.
 
-Allinea MAP is a profiler for C/C++/Fortran HPC codes. It is designed for profiling parallel code, which uses pthreads, OpenMP or MPI.
+Allinea MAP is a profiler for C/C++/Fortran HPC codes. It is designed for profiling parallel code, which uses Pthreads, OpenMP or MPI.
 
 ## License and Limitations for Anselm Users
 

docs.it4i/anselm/software/debuggers/allinea-performance-reports.md

@@ -29,7 +29,7 @@ Instead of [running your MPI program the usual way](../mpi/), use the the perf r
     $ perf-report mpirun ./mympiprog.x
 ```
 
-The mpi program will run as usual. The perf-report creates two additional files, in \*.txt and \*.html format, containing the performance report. Note that [demanding MPI codes should be run within the queue system](../../job-submission-and-execution/).
+The MPI program will run as usual. The perf-report creates two additional files, in \*.txt and \*.html format, containing the performance report. Note that [demanding MPI codes should be run within the queue system](../../job-submission-and-execution/).
 
 ## Example
 

docs.it4i/anselm/software/debuggers/cube.md

@@ -30,7 +30,7 @@ CUBE is a graphical application. Refer to Graphical User Interface documentation
 !!! note
     Analyzing large data sets can consume large amount of CPU and RAM. Do not perform large analysis on login nodes.
 
-After loading the appropriate module, simply launch cube command, or alternatively you can use scalasca -examine command to launch the GUI. Note that for Scalasca datasets, if you do not analyze the data with scalasca -examine before to opening them with CUBE, not all performance data will be available.
+After loading the appropriate module, simply launch cube command, or alternatively you can use Scalasca -examine command to launch the GUI. Note that for Scalasca data sets, if you do not analyze the data with `scalasca -examine` before to opening them with CUBE, not all performance data will be available.
 
 References
 1\.  <http://www.scalasca.org/software/cube-4.x/download.html>

docs.it4i/anselm/software/debuggers/papi.md

@@ -10,13 +10,13 @@ PAPI can be used with parallel as well as serial programs.
 
 ## Usage
 
-To use PAPI, load [module](../../environment-and-modules/) papi:
+To use PAPI, load [module](../../environment-and-modules/) PAPI:
 
 ```bash
     $ module load papi
 ```
 
-This will load the default version. Execute module avail papi for a list of installed versions.
+This will load the default version. Execute module avail pap for a list of installed versions.
 
 ## Utilities
 

docs.it4i/anselm/software/debuggers/scalasca.md

@@ -23,7 +23,7 @@ Profiling a parallel application with Scalasca consists of three steps:
 
 ### Instrumentation
 
-Instrumentation via " scalasca -instrument" is discouraged. Use [Score-P instrumentation](score-p/).
+Instrumentation via `scalasca -instrument` is discouraged. Use [Score-P instrumentation](score-p/).
 
 ### Runtime Measurement
 
@@ -61,7 +61,7 @@ If you do not wish to launch the GUI tool, use the "-s" option :
 scalasca -examine -s <experiment_directory>
 ```
 
-Alternatively you can open CUBE and load the data directly from here. Keep in mind that in that case the preprocessing is not done and not all metrics will be shown in the viewer.
+Alternatively you can open CUBE and load the data directly from here. Keep in mind that in that case the pre-processing is not done and not all metrics will be shown in the viewer.
 
 Refer to [CUBE documentation](cube/) on usage of the GUI viewer.
 

docs.it4i/anselm/software/debuggers/valgrind.md

@@ -259,4 +259,4 @@ Prints this output : (note that there is output printed for every launched MPI p
     ==31319== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 4 from 4)
 ```
 
-We can see that Valgrind has reported use of unitialised memory on the master process (which reads the array to be broadcast) and use of unaddresable memory on both processes.
+We can see that Valgrind has reported use of uninitialized memory on the master process (which reads the array to be broadcast) and use of unaddressable memory on both processes.

docs.it4i/anselm/software/gpi2.md

@@ -155,7 +155,7 @@ Submit the job and run the GPI-2 application
     Hello from rank 0 of 2
 ```
 
-At the same time, in another session, you may start the gaspi logger:
+At the same time, in another session, you may start the GASPI logger:
 
 ```bash
     $ ssh cn79

docs.it4i/anselm/software/intel-suite/intel-compilers.md

 # Intel Compilers
 
-The Intel compilers version 13.1.1 are available, via module intel. The compilers include the icc C and C++ compiler and the ifort fortran 77/90/95 compiler.
+The Intel compilers version 13.1.1 are available, via module Intel. The compilers include the ICC C and C++ compiler and the IFORT Fortran 77/90/95 compiler.
 
 ```bash
     $ module load intel
@@ -8,7 +8,7 @@ The Intel compilers version 13.1.1 are available, via module intel. The compiler
     $ ifort -v
 ```
 
-The intel compilers provide for vectorization of the code, via the AVX instructions and support threading parallelization via OpenMP
+The Intel compilers provide for vectorization of the code, via the AVX instructions and support threading parallelization via OpenMP
 
 For maximum performance on the Anselm cluster, compile your programs using the AVX instructions, with reporting where the vectorization was used. We recommend following compilation options for high performance
 

docs.it4i/anselm/software/intel-suite/intel-debugger.md

@@ -70,4 +70,4 @@ Run the idb debugger in GUI mode. The menu Parallel contains number of tools for
 
 ## Further Information
 
-Exhaustive manual on idb features and usage is published at [Intel website](http://software.intel.com/sites/products/documentation/doclib/stdxe/2013/composerxe/debugger/user_guide/index.htm)
+Exhaustive manual on IDB features and usage is published at [Intel website](http://software.intel.com/sites/products/documentation/doclib/stdxe/2013/composerxe/debugger/user_guide/index.htm)

docs.it4i/anselm/software/isv_licenses.md

@@ -61,11 +61,13 @@ The general format of the name is `feature__APP__FEATURE`.
 
 Names of applications (APP):
 
-* ansys
-* comsol
-* comsol-edu
-* matlab
-* matlab-edu
+```bash
+    ansys
+    comsol
+    comsol-edu
+    matlab
+    matlab-edu
+```
 
 To get the FEATUREs of a license take a look into the corresponding state file ([see above](isv_licenses/#Licence)), or use:
 

docs.it4i/anselm/software/mpi/mpi.md

@@ -111,7 +111,7 @@ Compile the above example with
     The MPI program executable must be compatible with the loaded MPI module.
     Always compile and execute using the very same MPI module.
 
-It is strongly discouraged to mix mpi implementations. Linking an application with one MPI implementation and running mpirun/mpiexec form other implementation may result in unexpected errors.
+It is strongly discouraged to mix MPI implementations. Linking an application with one MPI implementation and running mpirun/mpiexec form other implementation may result in unexpected errors.
 
 The MPI program executable must be available within the same path on all nodes. This is automatically fulfilled on the /home and /scratch file system. You need to preload the executable, if running on the local scratch /lscratch file system.
 

docs.it4i/anselm/software/numerical-languages/matlab.md

@@ -274,8 +274,8 @@ You can use MATLAB on UV2000 in two parallel modes:
 
 ### Threaded Mode
 
-Since this is a SMP machine, you can completely avoid using Parallel Toolbox and use only MATLAB's threading. MATLAB will automatically detect the number of cores you have allocated and will set maxNumCompThreads accordingly and certain operations, such as fft, , eig, svd, etc. will be automatically run in threads. The advantage of this mode is that you don't need to modify your existing sequential codes.
+Since this is a SMP machine, you can completely avoid using Parallel Toolbox and use only MATLAB's threading. MATLAB will automatically detect the number of cores you have allocated and will set maxNumCompThreads accordingly and certain operations, such as `fft`, `eig`, `svd` etc. will be automatically run in threads. The advantage of this mode is that you don't need to modify your existing sequential codes.
 
 ### Local Cluster Mode
 
-You can also use Parallel Toolbox on UV2000. Use l[ocal cluster mode](matlab/#parallel-matlab-batch-job-in-local-mode), "SalomonPBSPro" profile will not work.
+You can also use Parallel Toolbox on UV2000. Use [local cluster mode](matlab/#parallel-matlab-batch-job-in-local-mode), "SalomonPBSPro" profile will not work.

docs.it4i/anselm/software/numerical-languages/matlab_1314.md

@@ -84,7 +84,7 @@ Once this file is in place, user can request resources from PBS. Following examp
     -l feature__matlab__MATLAB=1
 ```
 
-This qsub command example shows how to run Matlab with 32 workers in following configuration: 2 nodes (use all 16 cores per node) and 16 workers = mpirocs per node (-l select=2:ncpus=16:mpiprocs=16). If user requires to run smaller number of workers per node then the "mpiprocs" parameter has to be changed.
+This qsub command example shows how to run Matlab with 32 workers in following configuration: 2 nodes (use all 16 cores per node) and 16 workers = mpiprocs per node (-l select=2:ncpus=16:mpiprocs=16). If user requires to run smaller number of workers per node then the "mpiprocs" parameter has to be changed.
 
 The second part of the command shows how to request all necessary licenses. In this case 1 Matlab-EDU license and 32 Distributed Computing Engines licenses.
 

docs.it4i/anselm/software/numerical-libraries/fftw.md

@@ -4,7 +4,7 @@ The discrete Fourier transform in one or more dimensions, MPI parallel
 
 FFTW is a C subroutine library for computing the discrete Fourier transform in one or more dimensions, of arbitrary input size, and of both real and complex data (as well as of even/odd data, e.g. the discrete cosine/sine transforms or DCT/DST). The FFTW library allows for MPI parallel, in-place discrete Fourier transform, with data distributed over number of nodes.
 
-Two versions, **3.3.3** and **2.1.5** of FFTW are available on Anselm, each compiled for **Intel MPI** and **OpenMPI** using **intel** and **gnu** compilers. These are available via modules:
+Two versions, **3.3.3** and **2.1.5** of FFTW are available on Anselm, each compiled for **Intel MPI** and **OpenMPI** using **Intel** and **gnu** compilers. These are available via modules:
 
 | Version        | Parallelization | module              | linker options                      |
 | -------------- | --------------- | ------------------- | ----------------------------------- |

docs.it4i/anselm/software/numerical-libraries/hdf5.md

@@ -4,7 +4,7 @@ Hierarchical Data Format library. Serial and MPI parallel version.
 
 [HDF5 (Hierarchical Data Format)](http://www.hdfgroup.org/HDF5/) is a general purpose library and file format for storing scientific data. HDF5 can store two primary objects: datasets and groups. A dataset is essentially a multidimensional array of data elements, and a group is a structure for organizing objects in an HDF5 file. Using these two basic objects, one can create and store almost any kind of scientific data structure, such as images, arrays of vectors, and structured and unstructured grids. You can also mix and match them in HDF5 files according to your needs.
 
-Versions **1.8.11** and **1.8.13** of HDF5 library are available on Anselm, compiled for **Intel MPI** and **OpenMPI** using **intel** and **gnu** compilers. These are available via modules:
+Versions **1.8.11** and **1.8.13** of HDF5 library are available on Anselm, compiled for **Intel MPI** and **OpenMPI** using **Intel** and **gnu** compilers. These are available via modules:
 
 | Version               | Parallelization                   | module                     | C linker options      | C++ linker options      | Fortran linker options  |
 | --------------------- | --------------------------------- | -------------------------- | --------------------- | ----------------------- | ----------------------- |

docs.it4i/anselm/software/numerical-libraries/petsc.md

@@ -32,9 +32,7 @@ PETSc needs at least MPI, BLAS and LAPACK. These dependencies are currently sati
 PETSc can be linked with a plethora of [external numerical libraries](http://www.mcs.anl.gov/petsc/miscellaneous/external.html), extending PETSc functionality, e.g. direct linear system solvers, preconditioners or partitioners. See below a list of libraries currently included in Anselm `petsc` modules.
 
 All these libraries can be used also alone, without PETSc. Their static or shared program libraries are available in
-`$PETSC_DIR/$PETSC_ARCH/lib` and header files in `$PETSC_DIR/$PETSC_ARCH/include`. `PETSC_DIR` and `PETSC_ARCH` are environment variables pointing to a specific PETSc instance based on the petsc module loaded.
-
-### Libraries Linked to PETSc on Anselm (As of 11 April 2015)
+`$PETSC_DIR/$PETSC_ARCH/lib` and header files in `$PETSC_DIR/$PETSC_ARCH/include`. `PETSC_DIR` and `PETSC_ARCH` are environment variables pointing to a specific PETSc instance based on the PETSc module loaded.
 
 * dense linear algebra
   * [Elemental](http://libelemental.org/)