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Commit 5153939b authored by Ondrej Dvorak's avatar Ondrej Dvorak
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Update dice.md

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...@@ -30,24 +30,22 @@ We have to be sure about your identity, this will be done throught this steps: ...@@ -30,24 +30,22 @@ We have to be sure about your identity, this will be done throught this steps:
### ***IT4I User (You Have IT4I Account With Access to Cluster Already)*** ### ***IT4I User (You Have IT4I Account With Access to Cluster Already)***
- iRODS clients are provided as a module on our ***Karolina*** cluster ( Barbora is in progress ) - iRODS clients are provided as a module on our ***Karolina*** cluster ( Barbora is in progress )
- config file (for client) will be loaded with module too - module irodsfs contains config file for irodsfs nad for icommands too
- PAM passwords is password, you set in aai.it4i.cz - PAM passwords is password, you set in aai.it4i.cz
***How to mount your collection*** ***How to mount your collection***
- load module iRODS
```console ```console
ssh some_user@karolina.it4i.cz ssh some_user@karolina.it4i.cz
ml iRODS ml irodsfs
``` ```
- config files for irodsfs and icommands will be loaded
now you can choose between Fuse client or iCommands - now you can choose between Fuse client or iCommands
***Fuse*** ***Fuse***
```console ```console
$ ml iRODS $ ml irodsfs
The following have been reloaded with a version change: The following have been reloaded with a version change:
1) iRODS/0.7.3 => iRODS/0.7.6 1) iRODS/0.7.3 => iRODS/0.7.6
...@@ -73,12 +71,14 @@ time="2022-08-01 12:44:27.555090" level=info msg="Successfully started backgroun ...@@ -73,12 +71,14 @@ time="2022-08-01 12:44:27.555090" level=info msg="Successfully started backgroun
you can work with fuse as an ordinary directory ( ls, cd, cp, mv etc ) you can work with fuse as an ordinary directory ( ls, cd, cp, mv etc )
***iCommands*** ***iCommands***
```console ```console
ml irodsfs
iinit iinit
Enter your current PAM password: Enter your current PAM password:
``` ```
- put you password you set in keycloak
```console ```console
ils ils
...@@ -189,16 +189,16 @@ fusermount -u ~/IRODS ...@@ -189,16 +189,16 @@ fusermount -u ~/IRODS
#### iCommands #### iCommands
- this is linux client only, basic knowledge of commandline is neccessary - this is linux client only, basic knowledge of commandline is neccessary
- we've tested it on centos7 - manual is for centos7
- for ubuntu20 - there is [http://docs.snic.se/wiki/IRODS_iCommands_installation_on_Ubuntu_20.04#Authenticate_and_test_iRODS_iCommands_client][j] - for ubuntu20 - there is [http://docs.snic.se/wiki/IRODS_iCommands_installation_on_Ubuntu_20.04#Authenticate_and_test_iRODS_iCommands_client][j]
```console ```console
sudo rpm --import https://packages.irods.org/irods-signing-key.asc sudo rpm --import https://packages.irods.org/irods-signing-key.asc
sudo wget -qO - https://packages.irods.org/renci-irods.yum.repo | sudo tee /etc/yum.repos.d/renci-irods.yum.repo sudo wget -qO - https://packages.irods.org/renci-irods.yum.repo | sudo tee /etc/yum.repos.d/renci-irods.yum.repo
sudo yum install epel-release -y sudo yum install epel-release -y
sudo yum install irods-icommands sudo yum install irods-icommands-4.2.7-1.x86_64
mkdir ~/.irods/ mkdir ~/.irods/
wget https://docs.it4i.cz/irods1.it4i.cz.crt [k] cd ~ && wget https://docs.it4i.cz/irods1.it4i.cz.crt [k]
``` ```
Copy&paste + edit irods_user_name Copy&paste + edit irods_user_name
...@@ -231,7 +231,7 @@ dr-xr-x---. 6 some_user some_user 206 Sep 29 08:53 .. ...@@ -231,7 +231,7 @@ dr-xr-x---. 6 some_user some_user 206 Sep 29 08:53 ..
-rw-r--r--. 1 some_user some_user 253 Sep 29 08:14 irods_environment.json -rw-r--r--. 1 some_user some_user 253 Sep 29 08:14 irods_environment.json
``` ```
**How to Start:** **How to Start:**
**step 1:** **step 1:**
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