Update openfoam.md

docs.it4i/software/viz/openfoam.md

-!!!warning
-    This page has not been updated yet. The page does not reflect the transition from PBS to Slurm.
-
 # OpenFOAM
 
 OpenFOAM is a free, open source CFD software package.
@@ -108,7 +105,7 @@ runApplication icoFoam
 Job submission (example for Karolina):
 
 ```console
-$ qsub -A OPEN-0-0 -q qprod -l select=1:ncpus=128,walltime=03:00:00 test.sh
+$ sbatch -A PROJECT_ID -p qcpu --nodes=1 --ntasks=128 --time=03:00:00 test.sh
 ```
 
 For information about job submission, look [here][2].
@@ -140,21 +137,22 @@ runApplication decomposePar
 Job submission
 
 ```console
-$ qsub -A OPEN-0-0 -q qprod -l select=1:ncpus=16,walltime=03:00:00 test.sh
+$ sbatch -A PROJECT_ID -p qcpu --nodes=1 --ntasks=16 --time=03:00:00 test.sh
 ```
 
 This job creates a simple block mesh and domain decomposition. Check your decomposition and submit parallel computation:
 
 !!! note
-    Create a testParallel.pbs PBS script:
+    Create a testParallel.slurm script:
 
 ```bash
 #!/bin/bash
-#PBS -N motorBike
-#PBS -l select=2:ncpus=16
-#PBS -l walltime=01:00:00
-#PBS -q qprod
-#PBS -A OPEN-0-0
+#SBATCH --job-name=motorBike
+#SBATCH --nodes=2
+#SBATCH --ntasks-per-node=16
+#SBATCH --time=01:00:00
+#SBATCH --partition=qcpu
+#SBATCH --account=ACCOUNT_ID
 
 ml openfoam/2.2.1-icc-openmpi1.6.5-DP
 source $FOAM_BASHRC
@@ -163,11 +161,11 @@ cd $FOAM_RUN/tutorials/incompressible/simpleFoam/motorBike
 
 nproc = 32
 
-mpirun -hostfile ${PBS_NODEFILE} -np $nproc snappyHexMesh -overwrite -parallel | tee snappyHexMesh.log
+mpirun -hostfile ${$SLURM_JOB_NODELIST} -np $nproc snappyHexMesh -overwrite -parallel | tee snappyHexMesh.log
 
-mpirun -hostfile ${PBS_NODEFILE} -np $nproc potentialFoam -noFunctionObject-writep -parallel | tee potentialFoam.log
+mpirun -hostfile ${$SLURM_JOB_NODELIST} -np $nproc potentialFoam -noFunctionObject-writep -parallel | tee potentialFoam.log
 
-mpirun -hostfile ${PBS_NODEFILE} -np $nproc simpleFoam -parallel | tee simpleFoam.log
+mpirun -hostfile ${$SLURM_JOB_NODELIST} -np $nproc simpleFoam -parallel | tee simpleFoam.log
 ```
 
 `nproc` – the number of subdomains
@@ -175,7 +173,7 @@ mpirun -hostfile ${PBS_NODEFILE} -np $nproc simpleFoam -parallel | tee simpleFoa
 Job submission
 
 ```console
-$ qsub testParallel.pbs
+$ srun testParallel.slurm
 ```
 
 ## Compile Your Own Solver
@@ -198,7 +196,7 @@ $ cd applications/solvers
 Copy icoFoam solver’s source files:
 
 ```console
-$ cp -r $FOAM_SOLVERS/incompressible/icoFoam/ My_icoFoam
+$ cp -r $FOAM_SOLVERS/incompressible/icoFoam/My_icoFoam
 $ cd My_icoFoam
 ```