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docs.it4i.cz
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6829b0dc
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6829b0dc
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2 years ago
by
Ondrej Dvorak
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Revert "Update docs.it4i/dice.md"
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!392
Revert "Update docs.it4i/dice.md"
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Update docs.it4i/dice.md
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@@ -51,74 +51,72 @@ ml irodsfs
-
config files for irodsfs and icommands will be loaded
-
now you can choose between Fuse client or iCommands
==='
***Fuse***
'
```console
ssh some_user@karolina.it4i.cz
[some_use@login4.karolina ~]$ ml irodsfs
irodsfs configuration file has been created at /home/dvo0012/.irods/config.yml
iRODS environment file has been created at /home/dvo0012/.irods/irods_environment.json
to start irodsfs, run: irodsfs -config ~/.irods/config.yml ~/IRODS
to start iCommands, run: iinit
For more information, see https://docs.it4i.cz/dice/
```
To mount your iRODS collection to ~/IRODS, run
```console
[some_user@login4.karolina ~]$ irodsfs -config ~/.irods/config.yml ~/IRODS
time="2022-08-04 08:54:13.222836" level=info msg="Logging to /tmp/irodsfs_cblmq5ab1lsaj31vrv20.log" function=processArguments package=main
Password:
time="2022-08-04 08:54:18.698811" level=info msg="Found FUSE Device. Starting iRODS FUSE Lite." function=parentMain package=main
time="2022-08-04 08:54:18.699080" level=info msg="Running the process in the background mode" function=parentRun package=main
time="2022-08-04 08:54:18.699544" level=info msg="Process id = 27145" function=parentRun package=main
time="2022-08-04 08:54:18.699572" level=info msg="Sending configuration data" function=parentRun package=main
time="2022-08-04 08:54:18.699730" level=info msg="Successfully sent configuration data to background process" function=parentRun package=main
time="2022-08-04 08:54:18.922490" level=info msg="Successfully started background process" function=parentRun package=main
```
To unmount it, run
```console
fusermount -u ~/IRODS
```
you can work with fuse as an ordinary directory ( ls, cd, cp, mv etc )
{ .annotate }
=== '
***iCommands***
'
```console
ssh some_user@karolina.it4i.cz
[some_use@login4.karolina ~]$ ml irodsfs
irodsfs configuration file has been created at /home/dvo0012/.irods/config.yml.
to start irods fs run: irodsfs -config ~/.irods/config.yml ~/IRODS
iCommands environment file has been created at /home/$USER/.irods/irods_environment.json.
to start iCommands run: iinit
[some_use@login4.karolina ~]$ iinit
Enter your current PAM password:
```
- put you password you set in keycloak
```console
[some_use@login4.karolina ~]$ ils
/IT4I/home/some_user:
test.1
test.2
test.3
test.4
```
- upload `iput` , download `iget`
- for more help, type `ihelp`
{ .annotate }
***Fuse***
```
console
ssh some_user@karolina.it4i.cz
[some_use@login4.karolina ~]$
ml irodsfs
irodsfs configuration file has been created at /home/dvo0012/.irods/config.yml
iRODS environment file has been created at /home/dvo0012/.irods/irods_environment.json
to start irodsfs, run: irodsfs -config ~/.irods/config.yml ~/IRODS
to start iCommands, run: iinit
For more information, see https://docs.it4i.cz/dice/
```
To mount your iRODS collection to ~/IRODS, run
```
console
[some_user@login4.karolina ~]$
irodsfs
-config
~/.irods/config.yml ~/IRODS
time="2022-08-04 08:54:13.222836" level=info msg="Logging to /tmp/irodsfs_cblmq5ab1lsaj31vrv20.log" function=processArguments package=main
Password:
time="2022-08-04 08:54:18.698811" level=info msg="Found FUSE Device. Starting iRODS FUSE Lite." function=parentMain package=main
time="2022-08-04 08:54:18.699080" level=info msg="Running the process in the background mode" function=parentRun package=main
time="2022-08-04 08:54:18.699544" level=info msg="Process id = 27145" function=parentRun package=main
time="2022-08-04 08:54:18.699572" level=info msg="Sending configuration data" function=parentRun package=main
time="2022-08-04 08:54:18.699730" level=info msg="Successfully sent configuration data to background process" function=parentRun package=main
time="2022-08-04 08:54:18.922490" level=info msg="Successfully started background process" function=parentRun package=main
```
To unmount it, run
```
console
fusermount -u ~/IRODS
```
you can work with fuse as an ordinary directory ( ls, cd, cp, mv etc )
***iCommands***
```
console
ssh some_user@karolina.it4i.cz
[some_use@login4.karolina ~]$
ml irodsfs
irodsfs configuration file has been created at /home/dvo0012/.irods/config.yml.
to start irods fs run: irodsfs -config ~/.irods/config.yml ~/IRODS
iCommands environment file has been created at /home/$
USER/.irods/irods_environment.json.
to start iCommands run: iinit
[some_use@login4.karolina ~]$
iinit
Enter your current PAM password:
```
-
put you password you set in keycloak
```
console
[some_use@login4.karolina ~]$
ils
/IT4I/home/some_user:
test.1
test.2
test.3
test.4
```
-
upload
`iput`
, download
`iget`
-
for more help, type
`ihelp`
### ***Users Without IT4I Account (No Access to Cluster)***
-
we suppose, you will upload your data from your local pc/vm
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