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docs.it4i.cz
Commits
8277c99a
Commit
8277c99a
authored
2 years ago
by
Ondrej Dvorak
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Update docs.it4i/dice.md, docs.it4i/img/eosc-marketplace-active.jpg
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Update docs.it4i/irods.it4i.cz.crt, docs.it4i/irods_environment.json,...
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2 years ago
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docs.it4i/dice.md
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docs.it4i/dice.md
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...
@@ -48,15 +48,16 @@ We have to be sure about your identity, this will be done throught this steps:
...
@@ -48,15 +48,16 @@ We have to be sure about your identity, this will be done throught this steps:


-
contact our support@it4i.cz by mail, we will create your account at our iRODS server.
-
contact our support@it4i.cz by mail, we will create your account at our iRODS server.
-
fill this request for
[
EUDAT
][
h
]
, please specify requested capacity.
-
***fill this request on [EOSC-MARKETPLACE][h] - recommended ***
or at
[
EUDAT
][
l
]
, please specify requested capacity.
-
!
[](
img/eosc-marketplace-active.jpg
)
-
!
[](
img/eudat_request.jpg
)
-
!
[](
img/eudat_request.jpg
)
## ***Access to iRods Collection From Karolina***
## ***Access to iRods Collection From Karolina***
-
access to cluster is must (it4i account)
-
access to cluster is must (it4i account)
-
iRODS clients are provided as a module on our
***Karolina***
cluster ( Barbora is in progress )
-
iRODS clients are provided as a module on our
***Karolina***
cluster ( Barbora is in progress )
-
module irodsfs loads config file for irodsfs
n
ad for icommands too
-
module irodsfs loads config file for irodsfs a
n
d for icommands too
-
PAM
password
s is password, you set in
aai.it4i.cz
-
password
to irods is set already, but you can set new at
aai.it4i.cz
.
***How to mount your collection***
***How to mount your collection***
...
@@ -206,9 +207,36 @@ total 0
...
@@ -206,9 +207,36 @@ total 0
### iCommands
### iCommands
-
this is linux client only, basic knowledge of commandline is neccessary
-
this is linux client only, basic knowledge of commandline is neccessary
-
manual is for centos7
-
we recommend Centos7, ubuntu 20 is optional
-
for ubuntu20 - there is
[
http://docs.snic.se/wiki/IRODS_iCommands_installation_on_Ubuntu_20.04#Authenticate_and_test_iRODS_iCommands_client
][
j
]
***steps for Ubuntu20:***
```
console
Prepare IRODS APT repository
dejan@dejan:~$
LSB_RELEASE
=
"bionic"
dejan@dejan:~$
wget
-qO
- https://packages.irods.org/irods-signing-key.asc |
sudo
apt-key add -
OK
dejan@dejan:~$
echo
"deb [arch=amd64] https://packages.irods.org/apt/
${
LSB_RELEASE
}
main"
\
>
|
sudo tee
/etc/apt/sources.list.d/renci-irods.list
deb [arch=amd64] https://packages.irods.org/apt/ bionic main
dejan@dejan:~$
sudo
apt-get update
dejan@dejan:~$
apt-cache search irods
dejan@dejan:~$
wget
-c
\
http://security.ubuntu.com/ubuntu/pool/main/p/python-urllib3/python-urllib3_1.22-1ubuntu0.18.04.2_all.deb \
http://security.ubuntu.com/ubuntu/pool/main/r/requests/python-requests_2.18.4-2ubuntu0.1_all.deb \
http://security.ubuntu.com/ubuntu/pool/main/o/openssl1.0/libssl1.0.0_1.0.2n-1ubuntu5.10_amd64.deb
dejan@dejan:~$
sudo
apt
install
\
./python-urllib3_1.22-1ubuntu0.18.04.2_all.deb \
./python-requests_2.18.4-2ubuntu0.1_all.deb \
./libssl1.0.0_1.0.2n-1ubuntu5.6_amd64.deb
dejan@dejan:~$
rm
-rf
\
./python-urllib3_1.22-1ubuntu0.18.04.2_all.deb \
./python-requests_2.18.4-2ubuntu0.1_all.deb \
./libssl1.0.0_1.0.2n-1ubuntu5.6_amd64.deb
dejan@dejan:~$
sudo
apt
install
-y
irods-icommands
```
***Steps for centos***
```
console
```
console
sudo rpm --import https://packages.irods.org/irods-signing-key.asc
sudo rpm --import https://packages.irods.org/irods-signing-key.asc
sudo wget -qO - https://packages.irods.org/renci-irods.yum.repo | sudo tee /etc/yum.repos.d/renci-irods.yum.repo
sudo wget -qO - https://packages.irods.org/renci-irods.yum.repo | sudo tee /etc/yum.repos.d/renci-irods.yum.repo
...
@@ -275,7 +303,7 @@ For more commands, use the `ihelp` command.
...
@@ -275,7 +303,7 @@ For more commands, use the `ihelp` command.
[
c
]:
https://irods.org/
[
c
]:
https://irods.org/
[
d
]:
https://b2access.eudat.eu/
[
d
]:
https://b2access.eudat.eu/
[
f
]:
https://aai.it4i.cz/realms/IT4i_IRODS/account/#/
[
f
]:
https://aai.it4i.cz/realms/IT4i_IRODS/account/#/
[
h
]:
https://
www.eudat.eu/contact-support-request?Service=B2SAFE
[
h
]:
https://
marketplace.eosc-portal.eu/services/b2safe/offers
[
i
]:
https://cyberduck.io/download/
[
i
]:
https://cyberduck.io/download/
[
j
]:
http://docs.snic.se/wiki/IRODS_iCommands_installation_on_Ubuntu_20.04#Authenticate_and_test_iRODS_iCommands_client
[
k
]:
https://docs.it4i.cz/irods.it4i.cz.crt
[
k
]:
https://docs.it4i.cz/irods.it4i.cz.crt
[
l
]:
https://www.eudat.eu/contact-support-request?Service=B2SAFE
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