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Commit 8a16ce21 authored by Lukáš Krupčík's avatar Lukáš Krupčík
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4 merge requests!368Update prace.md to document the change from qprace to qprod as the default...,!367Update prace.md to document the change from qprace to qprod as the default...,!366Update prace.md to document the change from qprace to qprod as the default...,!323extended-acls-storage-section
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...@@ -3,15 +3,3 @@ Převod html dokumentace do md formátu ...@@ -3,15 +3,3 @@ Převod html dokumentace do md formátu
------------------- -------------------
**RUČNÍ ČIŠTĚNÍ** **RUČNÍ ČIŠTĚNÍ**
------------------ ------------------
**Stažení souborů:**
```bash
html_md.sh -w
```
**Konverze html do md**
```bash
html_md.sh -c
```
.terminal {
font-family: monospace, monospace;
cursor: text;
line-height: initial;
}
tty-player {
border: 2px solid #285577;
border-top: 1px solid #4c7899;
margin: 0 auto;
}
tty-player .title {
background: #285577;
border-bottom: 1px solid #4c7899;
color: #fff;
font-family: sans-serif;
font-weight: bold;
padding: 0.2em;
line-height: 1;
height: 1em;
cursor: default;
}
tty-player menu {
display: none;
}
tty-player {
display: inline-block;
position: relative;
}
tty-player:not([controls]) tty-player-controls {
display: none;
}
tty-player-poster {
/* XXX: <video> has an overlay with play button if [controls] over the poster *image*, but here we have an overlay with play button regardless. Perhaps specifying a poster currentTime or script might work? */
background: rgba(53, 47, 47, 0.5);
opacity: 0.5;
transition: opacity 0.2s linear;
background-repeat: no-repeat;
background-position: center;
background-image: url("data:image/svg+xml,%3C?xml%20version='1.0'%20encoding='UTF-8'%20standalone='no'?%3E%3Csvg%20xmlns='http://www.w3.org/2000/svg'%20width='66'%20height='66'%3E%3Cfilter%20id='f'%3E%3CfeColorMatrix%20type='matrix'%20values='0%200%200%200%200%200%200%200%200%200%200%200%200%200%200%200%200%200%20.5%200'/%3E%3CfeGaussianBlur%20result='r'%20stdDeviation='2'/%3E%3CfeComposite%20in='SourceGraphic'%20in2='r'/%3E%3C/filter%3E%3Cpath%20fill='%23ddd'%20stroke='%23ccc'%20stroke-width='1'%20d='M33,5.5A27.5,27.5%200%200%200%205.5,33%2027.5,27.5%200%200%200%2033,60.5%2027.5,27.5%200%200%200%2060.5,33%2027.5,27.5%200%200%200%2033,5.5Zm-9.5,13%2025,14.5-25,14.5%200,-29z'%20filter='url(%23f)'/%3E%3C/svg%3E");
position: absolute;
top: 0;
left: 0;
right: 0;
bottom: 0;
}
tty-player[controls] tty-player-poster {
bottom: 28px;
}
tty-player:hover tty-player-poster {
opacity: 1;
}
tty-player-controls {
position: absolute;
left: 0;
right: 0;
bottom: 0;
background: rgba(53, 47, 47, 0.5);
opacity: 0;
display: flex;
flex-direction: row;
transition: opacity 0.2s linear;
cursor: default;
}
/* Browsers tend to show the controls when a <video> ends, too; I, however, am not doing this for now at least as the controls will overlap with what is often the most important part of the terminal (the bottom). For this reason, I haven’t hooked up any support for that either, only showing controls persistently when the poster is up. */
tty-player-controls.poster,
tty-player:hover tty-player-controls {
opacity: 1;
}
tty-player-controls input[type=range], tty-player-controls button {
margin: 0;
padding: 0;
border: none;
background: none;
font: inherit;
line-height: inherit;
-moz-appearance: none;
-webkit-appearance: none;
}
tty-player-controls button {
padding: 0;
background: none;
opacity: 0.75;
flex: 0 1 auto;
line-height: 1;
width: 28px;
height: 28px;
}
tty-player-controls button:hover {
color: #777;
opacity: 1;
}
tty-player-controls input[type=range] {
flex: 1;
height: 8px;
margin: 10px 5px;
}
tty-player-controls button {
background-repeat: no-repeat;
background-position: center;
}
tty-player-controls button.play {
background-image: url("data:image/svg+xml,%3C?xml%20version='1.0'%20encoding='UTF-8'%20standalone='no'?%3E%3Csvg%20xmlns='http://www.w3.org/2000/svg'%20width='14'%20height='16'%3E%3Cpath%20fill='%23ccc'%20d='M0,0%200,16%2014,8Z'/%3E%3C/svg%3E");
}
tty-player-controls button.pause {
background-image: url("data:image/svg+xml,%3C?xml%20version='1.0'%20encoding='UTF-8'%20standalone='no'?%3E%3Csvg%20xmlns='http://www.w3.org/2000/svg'%20width='14'%20height='16'%3E%3Cpath%20fill='%23ccc'%20d='M1,0L1,16L5,16L5,0L0,0zM9,0L9,16L13,16L13,0L9,0z'/%3E%3C/svg%3E");
}
tty-player-controls input[type=range]:focus {
box-shadow: none;
outline: none;
}
tty-player-controls input[type=range]::-moz-range-track,
tty-player-controls input[type=range]::-moz-range-thumb,
tty-player-controls input[type=range]::-moz-range-progress {
border-radius: 4px;
height: 8px;
}
tty-player-controls input[type=range]::-moz-range-track {
background: rgba(255, 255, 255, 0.5);
}
tty-player-controls input[type=range]::-moz-range-thumb {
-moz-appearance: none;
width: 0;
background: transparent;
border: 0;
border-radius: 0;
box-shadow: 0;
position: relative;
}
tty-player-controls input[type=range]::-moz-range-progress {
background: #fff;
}
input[type=range] {
overflow: hidden;
}
tty-player-controls input[type=range]::-webkit-slider-runnable-track {
-webkit-appearance: none;
height: 8px;
background: rgba(255, 255, 255, 0.5);
//border-radius: 4px;
}
tty-player-controls input[type=range]::-webkit-slider-thumb:before {
position: absolute;
top: 0;
right: 50%;
left: -9999px;
background: #fff;
content: '';
height: 8px;
pointer-events: none;
}
tty-player-controls input[type=range]::-webkit-slider-thumb {
-webkit-appearance: none;
width: 0;
height: 0;
position: relative;
}
/* I have not altered IE’s styles because I feel them already satisfactory */
tty-player-controls .current-time {
position: absolute;
color: #ddd;
background: #888;
font-family: sans-serif;
font-size: 12px;
display: block;
box-shadow: 0 1px rgba(0, 0, 0, 0.5), 0 1px 2px rgba(0, 0, 0, 0.5), inset 0 1px rgba(255, 255, 255, 0.2);
padding: 0 5px;
line-height: 16px;
border-radius: 4px;
top: -7px;
}
tty-player-controls .current-time::after {
content: "";
position: absolute;
width: 8px;
height: 8px;
background: linear-gradient(-45deg, #888 50%, transparent 50%);
box-shadow: 1px 1px rgba(0, 0, 0, 0.5), 1px 1px 1px rgba(0, 0, 0, 0.5);
bottom: -3px;
left: 50%;
margin-left: -5px;
transform: rotate(45deg);
}
tty-player-controls .duration {
font-family: sans-serif;
font-size: 12px;
color: #999;
line-height: 18px;
padding: 5px;
}
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|Date and time|Title and description|
|---|---|
| 13.07.2016 15:40|[MATLAB 2015b](https://docs.it4i.cz/whats-new/news-feed/matlab-2015b "MATLAB 2015b")|
| 08.07.2016 00:00|[Vampir installed](https://docs.it4i.cz/whats-new/news-feed/vampir-installed "Vampir installed")|
| 30.06.2016 00:00|[Allinea Tools updated to 6.0.6](https://docs.it4i.cz/whats-new/news-feed/allinea-tools-updated-to-6-0.6 "Allinea Tools updated to 6.0.6")|
| 30.06.2016 00:00|[Intel VTune Amplifier support for Xeon Phi on Salomon](https://docs.it4i.cz/whats-new/news-feed/intel-vtune-amplifier-support-for-xeon-phi-on-salomon "Intel VTune Amplifier support for Xeon Phi on Salomon")|
| 23.06.2016 00:00|[New method to execute parallel MATLAB jobs](https://docs.it4i.cz/whats-new/news-feed/new-method-to-execute-parallel-matlab-jobs "New method to execute parallel MATLAB jobs")|
| 08.06.2016 00:00|[New versions of Allinea Forge and Performance Reports](https://docs.it4i.cz/whats-new/news-feed/new-versions-of-allinea-forge-and-performance-version "New versions of Allinea Forge and Performance Reports")|
| 06.06.2016 00:00|[Intel VTune is working](https://docs.it4i.cz/whats-new/news-feed/intel-vtune-is-working "Intel VTune is working")|
| 31.05.2016 14:00|[Intel Parallel Studio 2016 update 3](https://docs.it4i.cz/whats-new/news-feed/intel-parallel-studio-2016-update-3 "Intel Parallel Studio 2016 update 3")|
| 05.05.2016 15:58|[ANSYS 17.0 Installed](https://docs.it4i.cz/whats-new/news-feed/ansys-17-0-installed "ANSYS 17.0 Installed")|
| 29.04.2016 14:25|[Allinea Forge 6.0](https://docs.it4i.cz/whats-new/news-feed/allinea-forge-6.0 "Allinea Forge 6.0")|
| 29.04.2016 14:23|[Issue with Intel MPI 4.1.1 on Salomon](https://docs.it4i.cz/whats-new/news-feed/issue-with-intel-mpi-4-1-1-on-salomon "Issue with Intel MPI 4.1.1 on Salomon")|
| 22.04.2016 14:35|[New modules for Parallel programming in modern Fortran course](https://docs.it4i.cz/whats-new/news-feed/new-modules-for-parallel-programming-in-modern-fortran-course "New modules for Parallel programming in modern Fortran course")|
| 13.04.2016 14:20|[Octave updated to 4.0.1 on Anselm](https://docs.it4i.cz/whats-new/news-feed/octave-updated-to-4-0-1-on-anselm "Octave updated to 4.0.1 on Anselm")|
| 01.04.2016 00:00|[Allinea Forge 5.1 installed on Anselm](https://docs.it4i.cz/whats-new/news-feed/allinea-forge-5-1-installed-on-anselm "Allinea Forge 5.1 installed on Anselm")|
| 07.03.2016 00:00|[Cuda 7.5 is now installed on Anselm](https://docs.it4i.cz/whats-new/news-feed/cuda-7-5-is-now-installed-on-anselm "Cuda 7.5 is now installed on Anselm")|
| 24.02.2016 00:00|[Added basic documentation for Intel Advisor and Intel Inspector](https://docs.it4i.cz/whats-new/news-feed/added-basic-documentation-for-intel-advisor-and-intel-inspector "Added basic documentation for Intel Advisor and Intel Inspector")|
| 24.02.2016 00:00|[Anselm downtime has been extended to Feb 26th.](https://docs.it4i.cz/whats-new/news-feed/anselm-downtime-has-been-extended-to-feb-26th "Anselm downtime has been extended to Feb 26th.")|
| 11.02.2016 00:00|[Allinea Forge documentation updated](https://docs.it4i.cz/whats-new/news-feed/allinea-forge-documentation-updated "Allinea Forge documentation updated")|
| 09.02.2016 00:00|[New bioinformatic tools installed: FastQC/0.11.3, GATK/3.5-Java-1.7.0\_79, picard/2.1.0, SAMtools/1.3-foss-2015g, SnpEff/4.1\_G, Trimmomatic/0.35-Java-1.7.0\_79](https://docs.it4i.cz/whats-new/news-feed/new-bioinformatic-tools-installed-fastqc-0-11-3-gatk-3-5-java-1-7-0_79-picard-2-1-0-samtools-1-3-foss-2015g-snpeff-4-1_g-trimmomatic-0-35-java-1-7.0_79 "New bioinformatic tools installed: FastQC/0.11.3, GATK/3.5-Java-1.7.0_79, picard/2.1.0, SAMtools/1.3-foss-2015g, SnpEff/4.1_G, Trimmomatic/0.35-Java-1.7.0_79")
| 26.01.2016 00:00|[Salomon PBS changes](https://docs.it4i.cz/whats-new/news-feed/salomon-pbs-changes "Salomon PBS changes")|
| 15.01.2016 00:00|[Capacity computing updated for Salomon](https://docs.it4i.cz/whats-new/news-feed/capacity-computing-updated-for-salomon "Capacity computing updated for Salomon")|
| 13.01.2016 00:00|[Mono 4.2.2 and MPI.NET 1.2 on Salomon](https://docs.it4i.cz/whats-new/news-feed/mono-4-2-2-and-mpi-net-1-2-on-salomon "Mono 4.2.2 and MPI.NET 1.2 on Salomon")|
$ termrec login_anselm.ttyrec
# login to Anselm cluster from local linux machine
ssh -i /home/local/.ssh/id_rsa rus016@login1.anselm.it4i.cz
# Welcome to Anselm supercomputer cluster
# run htop command
htop
# logout from the cluster
logout
File deleted
File deleted
termrec -e 'ssh -i /home/local/.ssh/id_rsa rus016@anselm.it4i.cz' modules_anselm.ttyrec
# Working with modules
# get the current version of Python
$ python --version
# run Python
python
# right now is version 2.6.6
# search all available Python's modules
module avail |& grep Python/
# for example let's choose a new module Python 3.5.1
$ module load Python/3.5.1-intel-2016.01
# and now get the current version of Python
$ python --version
# run Python
python
# that's correct, version 3.5.1
# now turn back to old version you have to unload module
$ module unload Python/3.5.1-intel-2016.01
$ python --version
# Python version 2.6.6 is ready to use now
File deleted
$ termrec transfer_scp_anselm.ttyrec
# File transfer from local machine to Anselm cluster
# create local directory with files
$ mkdir folder
$ cd folder
$ touch test_file.scp
$ mkdir local_dir
$ touch local_dir/file.txt
# using scp command to transfer a file to the cluster
$ scp test_file.scp rus016@anselm.it4i.cz:/home/rus016/test_file.scp
# successfully uploaded to the cluster
# using scp command to transfer a directory to the cluster
$ scp -r local_dir rus016@anselm.it4i.cz:/home/rus016/local_dir
# successfully uploaded to the cluster
# login to Anselm cluster and check all transfered files
ssh -i /home/local/.ssh/id_rsa rus016@anselm.it4i.cz
$ls -l
# yes, all files and directory are stored in home directory on the cluster
File deleted
$ termrec transfer_sftp_anselm.ttyrec
# File transfer from local machine to Anselm cluster
# using sftp command
$ touch test_file.sftp
$ sftp -o IdentityFile=/home/local/.ssh/id_rsa rus016@anselm.it4i.cz
# list of all commands - help or ?
sftp> help
# display remote working directory on Anselm cluster
sftp> pwd
# display remote directory listing on Anselm cluster
sftp> ls -la
# display statistics for remote directory
sftp> df -h
# display local working directory on local linux machine
sftp> lpwd
# display local directory listing on local linux machine
sftp> lls -la
# now we can upload a file from linux machine to Anselm cluster
sftp> put test_file.sftp
# and then check if successfully uploaded
sftp> ls -l
# of course we can download a file from the cluster
sftp> get demo.tar.gz
# and check in local directory
sftp> lls -l
# delete local file from sftp
sftp>!rm demo.tar.gz
# quit sftp
sftp> exit
# login to Anselm cluster and check all transfered files
ssh -i /home/local/.ssh/id_rsa rus016@anselm.it4i.cz
$ls -l
# yes, all files are stored in home directory on the cluster
File deleted
File deleted
$ termrec login_salomon.ttyrec
# login to Salomon cluster from local linux machine
ssh -i /home/local/.ssh/id_rsa dd-16-12-13@salomon.it4i.cz
# Welcome to Salomon supercomputer cluster
# run htop command
htop
# logout from the cluster
logout
File deleted
$ termrec -e 'ssh -i /home/local/.ssh/id_rsa dd-16-12-13@salomon.it4i.cz' modules_salomonn.ttyrec
# Working with modules
# get the current version of Python
$ python --version
# run Python
python
# right now is version 2.6.6
# search all available Python's modules
module avail |& grep Python/
# for example let's choose a new module Python 3.5.1
$ module load Python/3.5.1-intel-2016.01
# and now get the current version of Python
$ python --version
# run Python
python
# that's correct, version 3.5.1
# now turn back to old version you have to unload module
$ module unload Python/3.5.1-intel-2016.01
$ python --version
# Python version 2.6.6 is ready to use now
File deleted
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