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Commit a84498c7 authored by Jan Siwiec's avatar Jan Siwiec
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......@@ -43,15 +43,15 @@ First, we need to verify your identity, this is done through the following steps
1. After successfull login to B2Access:
1. **For Non IT4I Users**
1. **For Non IT4I Users**
Sign in to our [AAI][f] through your B2Access account.
You have to set a new password for iRods access.
Sign in to our [AAI][f] through your B2Access account.
You have to set a new password for iRods access.
1. **For IT4I Users**
1. **For IT4I Users**
Sign in to our [AAI][f] through your B2Access account and link your B2ACCESS identity with your existing account.
The IRODS password will be the same as your IT4I LDAP password (i.e. code.it4i.cz password).
Sign in to our [AAI][f] through your B2Access account and link your B2ACCESS identity with your existing account.
The IRODS password will be the same as your IT4I LDAP password (i.e. code.it4i.cz password).
![](img/aai.jpg)
![](img/aai2.jpg)
......@@ -144,35 +144,38 @@ Enter your current PAM password:
test.4
```
- upload `iput` , download `iget`
- for more help, type `ihelp`
Use the command `iput` for upload, `iget` for download, or `ihelp` for help.
## ***Access to iRods Collection From Other Resource***
- we suppose, you will upload your data from your local pc/vm
- password from [AAI][f]
!!! note
This guide assumes you are uploading your data from your local PC/VM.
Use the password from [AAI][f].
### You Need a Client to Connect to iRods Server
- There are many iRods clients, but we recommend theese:
- Cyberduck - for windows / mac, GUI .
- Fuse (irodsfs lite) - for linux, cli
- iCommands - for linux, cli .
- for access set PAM passwords at [AAI][f]
There are many iRods clients, but we recommend the following:
- Cyberduck - Windows/Mac, GUI
- Fuse (irodsfs lite) - Linux, CLI
- iCommands - Linux, CLI.
For access, set PAM passwords at [AAI][f].
### Cyberduck
- download [Cyberduck][i]
- download [connection profile][1] for IT4I irods server
- left doubleclick at this file opens connection
1. Download [Cyberduck][i].
2. Download [connection profile][1] for IT4I iRods server.
3. Left doubleclick this file to open connection.
![](img/irods-cyberduck.jpg)
### Fuse
- work with your irods collection like ordinary directory
- this is linux client only, basic knowledge of commandline is neccessary
!!!note "Linux client only"
This is Linux client only, basic knowledge of command line is neccessary.
Fuse allows you to work with your iRods collection like an ordinary directory.
```console
cd ~
......@@ -183,9 +186,9 @@ wget https://pki.cesnet.cz/_media/certs/chain_geant_ov_rsa_ca_4_full.pem -P ~/.i
sed -i 's,~,'"$HOME"',g' ~/irods/irods_environment.json
```
- edit `~/.irods/config.yml` with username from [AAI][f]
Edit `~/.irods/config.yml` with username from [AAI][f].
***How to mount your collection:***
#### Mounting Your Collection
```console
[some_user@local_pc ~]$ ./irodsfs -config ~/.irods/config.yml ~/IRODS
......@@ -200,7 +203,7 @@ time="2022-07-29 09:51:17.693772" level=info msg="Successfully sent configuratio
time="2022-07-29 09:51:18.008166" level=info msg="Successfully started background process" function=parentRun package=main
```
***How to put your data to iRODS***
#### Putting Your Data to iRODS
```console
[some_use@local_pc ~]$ cp test1G.txt ~/IRODS
......@@ -214,7 +217,9 @@ total 0
-rwx------ 1 some_user some_user 1073741824 Nov 4 2021 test1G.txt
```
***How to stop - unmout your collection:***
#### Unmounting Your Collection
To stop/unmount your collection, use:
```console
[some_user@local_pc ~]$ fusermount -u ~/IRODS
......@@ -222,10 +227,12 @@ total 0
### iCommands
- this is linux client only, basic knowledge of commandline is neccessary
- we recommend Centos7, ubuntu 20 is optional
-!!!note "Linux client only"
This is Linux client only, basic knowledge of command line is neccessary.
We recommend Centos7, Ubuntu 20 is optional.
***steps for Ubuntu20:***
#### Steps for Ubuntu 20
```console
LSB_RELEASE="bionic"
......@@ -252,10 +259,9 @@ sudo apt install -y irods-icommands
mkdir ~/.irods/ && cd "$_" && wget https://docs.it4i.cz/irods_environment.json
wget https://pki.cesnet.cz/_media/certs/chain_geant_ov_rsa_ca_4_full.pem -P ~/.irods
sed -i 's,~,'"$HOME"',g' ~/.irods/irods_environment.json
```
***Steps for centos***
#### Steps for Centos
```console
sudo rpm --import https://packages.irods.org/irods-signing-key.asc
......@@ -268,7 +274,7 @@ wget https://pki.cesnet.cz/_media/certs/chain_geant_ov_rsa_ca_4_full.pem -P ~/.i
sed -i 's,~,'"$HOME"',g' ~/.irods/irods_environment.json
```
- edit ***irods_user_name*** in `~/.irods/irods_environment.json` with username from [AAI][f]
Edit ***irods_user_name*** in `~/.irods/irods_environment.json` with the username from [AAI][f].
```console
[some_user@local_pc ~]$ pwd
......@@ -294,7 +300,7 @@ Enter your current PAM password:
file.jpg
```
***how to put your data to IRODS***
**How to put your data to iRods**
```console
[some_user@local_pc ~]$ iput cesnet.crt
......@@ -306,7 +312,7 @@ Enter your current PAM password:
cesnet.crt
```
***How to download data***
**How to download data**
```console
[some_user@local_pc ~]$ iget cesnet.crt
......
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