Merge branch 'content_revision' into 'master'

Content revision

See merge request !32

docs.it4i/anselm-cluster-documentation/resource-allocation-and-job-execution.md

 Resource Allocation and Job Execution
 =====================================
 
-To run a [job](../introduction/), [computational resources](../introduction/) for this particular job must be allocated. This is done via the PBS Pro job workload manager software, which efficiently distributes workloads across the supercomputer. Extensive informations about PBS Pro can be found in the [official documentation here](../../pbspro-documentation/sitemap/), especially in the PBS Pro User's Guide.
+To run a [job](../introduction/), [computational resources](../introduction/) for this particular job must be allocated. This is done via the PBS Pro job workload manager software, which efficiently distributes workloads across the supercomputer. Extensive informations about PBS Pro can be found in the [official documentation here](../pbspro-documentation/pbspro/), especially in the PBS Pro User's Guide.
 
 Resources Allocation Policy
 ---------------------------

docs.it4i/anselm-cluster-documentation/resources-allocation-policy.md

@@ -5,6 +5,9 @@ Resources Allocation Policy
 ---------------------------
 The resources are allocated to the job in a fairshare fashion, subject to constraints set by the queue and resources available to the Project. The Fairshare at Anselm ensures that individual users may consume approximately equal amount of resources per week. Detailed information in the [Job scheduling](job-priority/) section. The resources are accessible via several queues for queueing the jobs. The queues provide prioritized and exclusive access to the computational resources. Following table provides the queue partitioning overview:
 
+!!! Note "Note"
+	Check the queue status at https://extranet.it4i.cz/anselm/
+
  |queue |active project |project resources |nodes|min ncpus|priority|authorization|walltime |
  | --- | --- | --- | --- | --- | --- | --- | --- |
  |<strong>qexp</strong> |no |none required |2 reserved, 31 totalincluding MIC, GPU and FAT nodes |1 |<em>150</em> |no |1h |

docs.it4i/anselm-cluster-documentation/shell-and-data-access.md

-Shell access, data transfer, outgoing connections and GUI
+Accessing the Cluster
 ==============================
 
-Interactive Login
+Shell Access
 -----------------
 The Anselm cluster is accessed by SSH protocol via login nodes login1 and login2 at address anselm.it4i.cz. The login nodes may be addressed specifically, by prepending the login node name to the address.
 
@@ -203,3 +203,8 @@ Graphical User Interface
 
 -   The [X Window system](../get-started-with-it4innovations/accessing-the-clusters/graphical-user-interface/x-window-system/) is a principal way to get GUI access to the clusters.
 -   The [Virtual Network Computing](../get-started-with-it4innovations/accessing-the-clusters/graphical-user-interface/vnc/) is a graphical [desktop sharing](http://en.wikipedia.org/wiki/Desktop_sharing) system that uses the [Remote Frame Buffer protocol](http://en.wikipedia.org/wiki/RFB_protocol) to remotely control another [computer](http://en.wikipedia.org/wiki/Computer).
+
+VPN Access
+----------
+
+-   Access to IT4Innovations internal resources via [VPN](../get-started-with-it4innovations/vpn-access/).

docs.it4i/salomon/7d-enhanced-hypercube.md

@@ -6,7 +6,7 @@
 ![](../img/7D_Enhanced_hypercube.png)
 
 |Node type|Count|Short name|Long name|Rack|
-|---|---|
+|---|---|---|---|---|
 |M-Cell compute nodes w/o accelerator|576|cns1 -cns576|r1i0n0 - r4i7n17|1-4|
 |compute nodes MIC accelerated|432|cns577 - cns1008|r21u01n577 - r37u31n1008|21-38|
 

docs.it4i/salomon/compute-nodes.md

@@ -6,7 +6,7 @@ Nodes Configuration
 Salomon is cluster of x86-64 Intel based nodes. The cluster contains two types of compute nodes of the same processor type and memory size.
 Compute nodes with MIC accelerator **contains two Intel Xeon Phi 7120P accelerators.**
 
-[More about schematic representation of the Salomon cluster compute nodes IB topology](network-1/ib-single-plane-topology/).
+[More about schematic representation of the Salomon cluster compute nodes IB topology](ib-single-plane-topology/).
 
 ###Compute Nodes Without Accelerator
 
@@ -47,7 +47,7 @@ Compute nodes with MIC accelerator **contains two Intel Xeon Phi 7120P accelerat
 ### Compute Nodes Summary
 
  |Node type |Count |Memory |Cores |
- | --- | --- |
+ | --- | --- | --- | --- |
  |Nodes without accelerator |576 |128GB |24 @ 2.5Ghz |
  |Nodes with MIC accelerator |432 |128GB<p>32GB\ |<p>24 @ 2.5Ghz<p>61 @  1.238GHz\ |
  |UV2000 SMP node |1 |3328GB\ |<p>112 @ 3.3GHz\ |

docs.it4i/salomon/resource-allocation-and-job-execution.md

 Resource Allocation and Job Execution
 =====================================
 
-To run a [job](job-submission-and-execution/), [computational resources](resources-allocation-policy/) for this particular job must be allocated. This is done via the PBS Pro job workload manager software, which efficiently distributes workloads across the supercomputer. Extensive informations about PBS Pro can be found in the [official documentation here](../../pbspro-documentation/), especially in the [PBS Pro User's Guide](../../pbspro-documentation/).
+To run a [job](job-submission-and-execution/), [computational resources](resources-allocation-policy/) for this particular job must be allocated. This is done via the PBS Pro job workload manager software, which efficiently distributes workloads across the supercomputer. Extensive informations about PBS Pro can be found in the [official documentation here](../pbspro-documentation/pbspro/), especially in the PBS Pro User's Guide.
 
 Resources Allocation Policy
 ---------------------------

docs.it4i/salomon/resources-allocation-policy.md

@@ -5,6 +5,9 @@ Resources Allocation Policy
 ---------------------------
 The resources are allocated to the job in a fairshare fashion, subject to constraints set by the queue and resources available to the Project. The Fairshare at Anselm ensures that individual users may consume approximately equal amount of resources per week. Detailed information in the [Job scheduling](job-priority/) section. The resources are accessible via several queues for queueing the jobs. The queues provide prioritized and exclusive access to the computational resources. Following table provides the queue partitioning overview:
 
+!!! Note "Note"
+	Check the queue status at https://extranet.it4i.cz/rsweb/salomon/
+
  |queue |active project |project resources |nodes|min ncpus |priority|authorization|walltime |
  | --- | --- |--- |--- |--- |--- |--- |--- |
  |**qexe** Express queue|no |none required |32 nodes, max 8 per user |24 |150 |no |1 / 1h |

docs.it4i/salomon/shell-and-data-access.md

-Shell access, data transfer, outgoing connections and GUI
+Accessing the Cluster
 ==============================
 
-Interactive Login
+Shell Access
 -----------------
 The Salomon cluster is accessed by SSH protocol via login nodes login1, login2, login3 and login4 at address salomon.it4i.cz. The login nodes may be addressed specifically, by prepending the login node name to the address.
 
@@ -196,3 +196,8 @@ Graphical User Interface
 
 -   The [X Window system](../get-started-with-it4innovations/accessing-the-clusters/graphical-user-interface/x-window-system/) is a principal way to get GUI access to the clusters.
 -   The [Virtual Network Computing](../get-started-with-it4innovations/accessing-the-clusters/graphical-user-interface/vnc/) is a graphical [desktop sharing](http://en.wikipedia.org/wiki/Desktop_sharing) system that uses the [Remote Frame Buffer protocol](http://en.wikipedia.org/wiki/RFB_protocol) to remotely control another [computer](http://en.wikipedia.org/wiki/Computer).
+
+VPN Access
+----------
+
+-   Access to IT4Innovations internal resources via [VPN](../get-started-with-it4innovations/vpn-access/).

mkdocs.yml

@@ -31,7 +31,6 @@ pages:
     - Remote visualization: anselm-cluster-documentation/remote-visualization.md
     - Network: anselm-cluster-documentation/network.md
     - PRACE User Support: anselm-cluster-documentation/prace.md
-    - Resource Allocation and Job Execution : anselm-cluster-documentation/resource-allocation-and-job-execution.md
     - Resource allocation policy: anselm-cluster-documentation/resources-allocation-policy.md
     - Job Priority: anselm-cluster-documentation/job-priority.md
     - Job Submission and Execution: anselm-cluster-documentation/job-submission-and-execution.md
@@ -115,7 +114,6 @@ pages:
     - Salomon Cluster Network: salomon/network.md
     - IB single-plane topology: salomon/ib-single-plane-topology.md
     - 7D Enhanced Hypercube: salomon/7d-enhanced-hypercube.md
-    - Resource Allocation and Job Execution : salomon/resource-allocation-and-job-execution.md
     - Resources Allocation Policy: salomon/resources-allocation-policy.md
     - Job scheduling: salomon/job-priority.md
     - Job submission and execution: salomon/job-submission-and-execution.md