Commits · af8f372fcc0c68b3a3f6df11f87df4f4ca5dd249 · BioinformaticDataCompression / QcmpCompressionLibrary · GitLab

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Sep 23, 2020
- Make ImageU16Dataset currentVoxelLayer final. · af8f372f
  Vojtech Moravec authored Sep 23, 2020
  
  af8f372f
Sep 22, 2020
- Support stream compression/decompression of block vectors. · 13724779
  Vojtech Moravec authored Sep 22, 2020
  
  13724779
Sep 15, 2020
- Multiple changes to support stream compression/decompression. · 1c1b5d7e
  Vojtech Moravec authored Sep 15, 2020
  
  1c1b5d7e
Sep 14, 2020
- Add preloadGlobalCodebook method. · 46cedfe5
  Vojtech Moravec authored Sep 14, 2020
  46cedfe5
Sep 08, 2020
- Remove CodebookEntry class, instead use raw vector. · baeb1853
  Vojtech Moravec authored Sep 8, 2020
  baeb1853
Aug 18, 2020
- Refactor VQ decompression to remove duplicate code. · 6beb0e9a
  Vojtech Moravec authored Aug 18, 2020
  
  6beb0e9a
- Implement in-memory buffer decompression and refactor duplicate code. · 94c922c9
  Vojtech Moravec authored Aug 18, 2020
  94c922c9
- Set parsed RAW dims and improve logging. · 53b23309
  Vojtech Moravec authored Aug 18, 2020
  53b23309
Aug 11, 2020
- Fix renamed method name. · 3899a341
  Vojtech Moravec authored Aug 11, 2020
  
  3899a341
- Renamed Chunk2D -> Block. · 72ad00f2
  Vojtech Moravec authored Aug 11, 2020
  
  72ad00f2
Aug 08, 2020
- Prepare Voxel decompression in memory. · 68ad75ef
  Vojtěch Moravec authored Aug 8, 2020
  
  68ad75ef
Aug 07, 2020
- Read vector size from header and not from options. · 1b39e3a5
  Vojtěch Moravec authored Aug 7, 2020
  
  1b39e3a5
- Improve exception message to know the origin place. · c9f4b14b
  Vojtěch Moravec authored Aug 7, 2020
  
  c9f4b14b
Aug 06, 2020
- Implement first version (*untested*) of decompression from voxels. · 5f00d0f9
  Vojtech Moravec authored Aug 6, 2020
  
  5f00d0f9
- Remove debug printing code. · be4e07f1
  Vojtech Moravec authored Aug 6, 2020
  
  be4e07f1
- Implement Vector3D global codebook compression. · da5569b9
  Vojtech Moravec authored Aug 6, 2020
  
  da5569b9
Aug 04, 2020
- Return VQImageCompressor for `QuantizationType.Vector3D`. · f876c244
  Vojtech Moravec authored Aug 4, 2020
  
  f876c244
Jul 27, 2020
- Remove offset from both 2D and 3D chunk. · cfbedd67
  Vojtěch Moravec authored Jul 27, 2020
  cfbedd67
Jul 26, 2020
- Rename the reportProgressListeners -> reportProgressToListeners · 8d2e7df7
  Vojtěch Moravec authored Jul 26, 2020
  
  8d2e7df7
- Improve the reporting to listeners. · 30d72fa8
  Vojtěch Moravec authored Jul 26, 2020
  
  30d72fa8
Jul 24, 2020
- Support status and report listeners in compressor/decompressor. · 0bd555cd
  Vojtěch Moravec authored Jul 24, 2020
  0bd555cd
Jul 23, 2020
- Change data in ImageU16Dataset. · 22501b29
  Vojtěch Moravec authored Jul 23, 2020
  22501b29
Jul 22, 2020
- Support decompression to memory buffer. · a9de642a
  Vojtěch Moravec authored Jul 22, 2020
  a9de642a
Jul 20, 2020
- Add helpers for checks and move verbose flag to CompressionOptions. · d82fde8a
  Vojtěch Moravec authored Jul 20, 2020
  
  d82fde8a
- Use new options in whole program. · bd012100
  Vojtěch Moravec authored Jul 20, 2020
  
  bd012100
Mar 22, 2020
- Fixed bugs in SQ/VQ compression/decompression. · a103e1eb
  Vojtech Moravec authored Mar 22, 2020
  
  a103e1eb
- Fixes for new huffman coding. · bfe854aa
  Vojtech Moravec authored Mar 22, 2020
  
  bfe854aa
- Deprecated reference plane index in favor of middle plane. · dc7978ff
  Vojtech Moravec authored Mar 22, 2020
  
  dc7978ff
Jan 24, 2020
- Skip copy to chunks in VQ reconstrucion. · db9a49e7
  Vojtech Moravec authored Jan 24, 2020
  
  db9a49e7
Jan 21, 2020
- Move exceptions to its new package. · 06f2c3d0
  Vojtech Moravec authored Jan 21, 2020
  
  06f2c3d0
- Use special exception types for compression and decompression. · 7e6ccedf
  Vojtech Moravec authored Jan 21, 2020
  
  7e6ccedf
- Revert back to Java 9. · 7780766e
  Vojtech Moravec authored Jan 21, 2020
  7780766e
- Added plane times to verbose output · af5014a6
  Vojtech Moravec authored Jan 21, 2020
  
  af5014a6
Jan 20, 2020
- Use int instead of short in memory representation of data. · 80b5739b
  Vojtech Moravec authored Jan 20, 2020
  
  80b5739b
- Small fixes. · 183ac0a7
  Vojtech Moravec authored Jan 20, 2020
  
  183ac0a7
- Deleted old todo comment · 671fd603
  Vojtech Moravec authored Jan 20, 2020
  
  671fd603
Jan 19, 2020
- Refactored the decompression. · 9ffbddbd
  Vojtech Moravec authored Jan 19, 2020
  
  9ffbddbd