Commits · extended_loader_api_no_scifio · BioinformaticDataCompression / QcmpCompressionLibrary · GitLab

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Dec 15, 2020
- Base prep for IQcmpFile abstraction. · 186990ac
  Vojtech Moravec authored 4 years ago
  
  186990ac
- Implement missing logic in QCMPFileHeaderV2. · 9ec82676
  Vojtech Moravec authored 4 years ago
  9ec82676
Dec 04, 2020
- Basic preparation for second version of QCMP file header. · 9a659ccb
  Vojtech Moravec authored 4 years ago
  
  9a659ccb
- Modify QCMPFileHeaderV1 header variables. · 7a06c09a
  Vojtech Moravec authored 4 years ago
  7a06c09a
- Rename QcmpFileHeader -> QCMPFileHeaderV1. · 434ddb96
  Vojtech Moravec authored 4 years ago
  
  434ddb96
- Draft of the QCMP v2 format. · 058f4fbd
  Vojtech Moravec authored 4 years ago
  
  058f4fbd
- Add blank line to fix table rendering. · 64609f08
  Vojtech Moravec authored 4 years ago
  
  64609f08
- Create FileTypeInspector which determine file type based on magic value. · 44a92b69
  Vojtech Moravec authored 4 years ago
  
  44a92b69
- Move classes from cache package to io package. · 76346d87
  Vojtech Moravec authored 4 years ago
  
  76346d87
Dec 03, 2020
- Propagate IOException from reading/writing of QVC files. · 6d6e74ef
  Vojtech Moravec authored 4 years ago
  
  6d6e74ef
- Implement conversion of QVC files. · 28c691c5
  Vojtech Moravec authored 4 years ago
  
  28c691c5
- Extract QvcFile writing/saving functions to QvcFileWriter. · ffd6e09e
  Vojtech Moravec authored 4 years ago
  
  ffd6e09e
- Move Qvc* classes to fileformat package. · ae52141d
  Vojtech Moravec authored 4 years ago
  
  ae52141d
- Prepare QVC conversion. · 6f4ae6bc
  Vojtech Moravec authored 4 years ago
  
  6f4ae6bc
- Improve formatting of QvcHeader report. · 8ddcc645
  Vojtech Moravec authored 4 years ago
  
  8ddcc645
- Fix QVC header validation and output better error message. · 7a350dd1
  Vojtech Moravec authored 4 years ago
  
  7a350dd1
Dec 02, 2020
- Write binary encoded huffman tree in compression. · f55cdca6
  Vojtech Moravec authored 4 years ago
  f55cdca6
- Read new version of QVC files in QuantizationCacheManager. · 85704457
  Vojtech Moravec authored 4 years ago
  
  85704457
- Use the improved codebook API. · 882bbd23
  Vojtech Moravec authored 4 years ago
  
  882bbd23
- Fix names of renamed classes. · 02df1827
  Vojtech Moravec authored 4 years ago
  
  02df1827
- Make createSymbolCodes static. · dc4f6d4c
  Vojtech Moravec authored 4 years ago
  dc4f6d4c
- Write the new qvc format and read both formats. · fcc04ca7
  Vojtech Moravec authored 4 years ago
  
  fcc04ca7
- Prepare QVC file changes. · 2757703c
  Vojtech Moravec authored 4 years ago
  
  2757703c
- Extend (SQ|VQ)Codebook from Codebook. · c919c964
  Vojtech Moravec authored 4 years ago
  
  c919c964
- Create base class for codebooks. · ee72aaa3
  Vojtech Moravec authored 4 years ago
  
  ee72aaa3
- Rename cache file classes · 31ffe119
  Vojtech Moravec authored 4 years ago
  
  31ffe119
- Create V2 of QvcFile format. · 21ab7bb2
  Vojtech Moravec authored 4 years ago
  
  21ab7bb2
Dec 01, 2020
- Rename CacheFileHeaderV1->QvcHeaderV1 · 47f7fa6d
  Vojtech Moravec authored 4 years ago
  
  47f7fa6d
- Move encode functionality to HuffmanEncoder class. · ce5fa4e6
  Vojtech Moravec authored 4 years ago
  
  ce5fa4e6
- Move symbol decoding to HuffmanDecoder class. · eafefe04
  Vojtech Moravec authored 4 years ago
  
  eafefe04
- Refactor Huffman code. · 8768db39
  Vojtech Moravec authored 4 years ago
  8768db39
Nov 26, 2020
- Implemect QCMPFileHeader as IFileHeader. · 1adedb13
  Vojtech Moravec authored 4 years ago
  1adedb13
- Move CacheFileHeaderV1 out of cache package. · dcc9e20a
  Vojtech Moravec authored 4 years ago
  
  dcc9e20a
- Add IFileHeader interface and implement it in CacheFileHeaderV1. · a580de0a
  Vojtech Moravec authored 4 years ago
  
  a580de0a
- Move CacheFileHeader to fileformat package. · 9f43685e
  Vojtech Moravec authored 4 years ago
  
  9f43685e
- Add commented out smape metric. · 3c15ae4a
  Vojtech Moravec authored 4 years ago
  
  3c15ae4a
- Debugging the new huffman code. · 6e2eceac
  Vojtech Moravec authored 4 years ago
  
  6e2eceac
Nov 24, 2020
- Add very compact method for saving Huffman trees. · 9beec742
  Vojtech Moravec authored 4 years ago
  
  9beec742
- Rename the BitStream functions. · 168a1bdf
  Vojtech Moravec authored 4 years ago
  
  168a1bdf
- Add tree node equality function. · fd6697ff
  Vojtech Moravec authored 4 years ago
  
  fd6697ff