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Commit 7145dd22 authored by Christopher Schmied's avatar Christopher Schmied
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Fixed bug in Snakefile in hdf5_xml_output rule

the output rule now references to the correct xml filename
parent 737c19ca
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......@@ -445,7 +445,7 @@ rule define_output:
# create mother .xml/.h5
rule hdf5_xml_output:
input: config["common"]["output_xml"].strip('\"') + ".xml"
output: expand("{dataset}.{suffix}",dataset=[ config["common"]["hdf5_xml_filename"].strip('\"')], suffix=["xml","h5"]),
output: expand("{dataset}.{suffix}",dataset=[ config["common"]["output_hdf5_xml"].strip('\"')], suffix=["xml","h5"]),
[ item+"_output" for item in datasets ]
log: "logs/f2_output_hdf5_xml.log"
run:
......
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